KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:37 2014 Check: 00 .. Name: ENSP00000400646/1-783 Len: 794 Check: 9949 Weight: 1.00 Name: ENSBTAP00000011729/1-783 Len: 794 Check: 7302 Weight: 1.00 Name: bmy_12810T0/1-779 Len: 794 Check: 5613 Weight: 1.00 Name: BACU013859/1-776 Len: 794 Check: 5221 Weight: 1.00 Name: ENSTTRP00000000027/1-729 Len: 794 Check: 5176 Weight: 1.00 // 1 50 ENSP00000400646/1-783 MAACRYCCSC LRLRPLSDGP FLLPRRDRAL TQLQVRALWS SAGSRAVAVD ENSBTAP00000011729/1-783 MAACRHCCSC LRLRPLGDGR LRLPGRDRTL TQLQVRALWG GTGPRSVAVD bmy_12810T0/1-779 MAACRPCCSC LQLRPLGRGP LRLPGRGRTL TQLQVRALWD GAGSRTVAVD BACU013859/1-776 MAACRPCCSC LHLRPLGRGP LCLPGRGRTL TQLQVRALWD GAGSRTVAVD ENSTTRP00000000027/1-729 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000400646/1-783 LGNRKLEISS GKLARFADGS AVVQSGDTAV MVTAVSKTKP SPSQFMPLVV ENSBTAP00000011729/1-783 LGSRKLEISS GKLARFADGS AVVQSGDTAV MVTAVSKTKP SPSQFMPLVV bmy_12810T0/1-779 LGSRKLEISS GKLARFADGS AIVQSGDTAV MVTAVSKTKP SPSQFMPLVV BACU013859/1-776 LGSRKLEISS GKLARFADGS AIVQSGDTAV MVTAVSKTKP SPSQFMPLVV ENSTTRP00000000027/1-729 ----KLEISS G-LVRFADGS AIVQSGDTAV MVTAVSKTKP SPSQFMPLVV 101 150 ENSP00000400646/1-783 DYRQKAAAAG RIPTNYLRRE IGTSDKEILT SRIIDRSIRP LFPAGYFYDT ENSBTAP00000011729/1-783 DYRQKAAAAG RIPTNYLRRE IGSSDKEILT SRVIDRSIRP LFPAGYFYDT bmy_12810T0/1-779 DYRQKAAAAG RIPTNYLRRE IGSSDKEILT SRVIDRSIRP LFPAGYFYDT BACU013859/1-776 DYRQKAAAAG RIPTNYLRRE IGSSDKEILT SRVIDRSIRP LFPAGYFYDT ENSTTRP00000000027/1-729 DYRQKAAAAG RIPTNYLRRE IGSSDKEILT SRVIDRSIRP LFPAGYFYDT 151 200 ENSP00000400646/1-783 QVLCNLLAVD GVNEPDVLAI NGASVALSLS DIPWNGPVGA VRIGIIDGEY ENSBTAP00000011729/1-783 QILCNLLAVD GVNEPDVLAI NGASVALSLS DIPWNGPIGA VRIGMIDGEC bmy_12810T0/1-779 QILCNLLAVD GVNEPDVLAI NGASVALSLS DIPWNGPIGA VRIGMIDGEC BACU013859/1-776 QILCNLLAVD GVNEPDVLAI NGASVALSLS DIPWNGPIGA VRIGMIDGEC ENSTTRP00000000027/1-729 QILCNLLAVD GVNEPDVLAI NGASVALSLS DIPWNGPIGA VRIGMIDGEC 201 250 ENSP00000400646/1-783 VVNPTRKEMS SSTLNLVVAG APKSQIVMLE ASAENILQQD FCHAIKVGVK ENSBTAP00000011729/1-783 VVNPTRKEMA NSTLNLVVTG APKSQIVMLE ASAENILQQD FCHAIKVGVK bmy_12810T0/1-779 IVNPTRKEMS SSILNLVVTG APKSQIVMLE ASAENILQQD FCHAIKVGVK BACU013859/1-776 VVNPTRKEMS SSTLNLVVTG APKSQIVMLE ASAENILQQD FCHAIKVGVK ENSTTRP00000000027/1-729 VVNPTRKEMS SSTLNLVVTG APKSQIVMLE ASAENILQQD FCHAIKVGVK 251 300 ENSP00000400646/1-783 YTQQIIQGIQ QLVKETGVTK RTPQKLFTPS PEIVKYTHKL AMERLYAVFT ENSBTAP00000011729/1-783 HTQQIIQGIQ QLVKENGVTK RTPQKLFVPS PEIVKHAHKL AMEKLYTVFT bmy_12810T0/1-779 YTQQIIQGIQ QLVKEIGVAK RTPQKLFVPL PEIVKHAHKL AMEKLYAVFT BACU013859/1-776 YTQQIIQGIQ QLVKEIGVAK RTPQKLFVPL PEIVKHAHKL AMEKLYAVFT ENSTTRP00000000027/1-729 YTQQIIQGIQ QLVKEIGVTK RTPQKLFVPL PEIVKHAHKL AMEKLYAVFT 301 350 ENSP00000400646/1-783 DYEHDKVSRD EAVNKIRLDT EEQLKEKFPE ADPYEIIESF NVVAKEVFRS ENSBTAP00000011729/1-783 DYEHDKISRD EAINKIRLDT EEQLKEKFPE VDSCEIIESF NIATKDVFRS bmy_12810T0/1-779 DHEHDKISRD EAVNKIRLDT EEQLKEKFPE VDSYEIIESF NVAAKDVFRS BACU013859/1-776 DHEHDKISRD EAVNKIRLDT EEQLKEKFPE VDSYEIIESF NVAAKDVFRS ENSTTRP00000000027/1-729 DHEHDKISRD EAVNKIRLDT EEQLKEKFPE VDSYEIIESF NVAAKDVFRS 351 400 ENSP00000400646/1-783 IVLNEYKRCD GRDLTSLRNV SCEVDMFKTL HGSALFQRGQ TQVLCTVTFD ENSBTAP00000011729/1-783 IILNEYKRCD GRDLTSLRNI NCEVDMFKIL HGSSLFQRGQ TQVLCTVTFD bmy_12810T0/1-779 IILNEYKRCD GRDLTSLRNI NCEVDMFKIL HGSSLFQRGQ TQVLCTVTFD BACU013859/1-776 IILNEYKRCD GRDLTSLRNI NCEVDMFKIL HGSSLFQRGQ TQVLCTVTFD ENSTTRP00000000027/1-729 IILNEYKRCD GRDLTSLRNI NCEVDMFKIL HGSSLFQRGQ TQVLCTVTFD 401 450 ENSP00000400646/1-783 SLESGIKSDQ VITAINGIKD KNFMLHYEFP PYATNEIGKV TGLNRRELGH ENSBTAP00000011729/1-783 SLESNFKSDR IITAINGIKD KNFMLHYEFP PYATNEIGKV TGINRRELGH bmy_12810T0/1-779 SLESSIKSDR IITAINSKRT -------EFP PYATNEIGKV TGVNRRELGH BACU013859/1-776 SLESSIKSDR IITAINGIKD KNFMLHYEFP PYATNEIGKV TGVNRRELGH ENSTTRP00000000027/1-729 SLESSIKSDR IITAINGIKD KNFMLHYEFP PYATNEIGKV TGVNRRELGH 451 500 ENSP00000400646/1-783 GALAEKALYP VIPRDFPFTI RVTSEVLESN GSSSMASACG GSLALMDSGV ENSBTAP00000011729/1-783 GALAERALYP VIPKDFPFTI RVTSEVLESN GSSSMASACG GSLALMDAGV bmy_12810T0/1-779 GALAERALYP VIPKDFPFTI RVTSEVLESN GSSSMASACG GSLALMDAGV BACU013859/1-776 GALAERALYP VIPKDFPFTI RVTSEVLESN GSSSMASACG GSLALMDAGV ENSTTRP00000000027/1-729 GALAERALYP VIPKDFPFTI RVTSEVLESN GSSSMASACG GSLALMDAGV 501 550 ENSP00000400646/1-783 PISSAVAGVA IGLVTKTDPE KGEIEDYRLL TDIL------ ----GIEDYN ENSBTAP00000011729/1-783 PISSAVAGVA IGLVTKNSPD KGEIEDYRLL TDIL------ ----GIEDYH bmy_12810T0/1-779 PISSAVAGVA IGLVTKNNPD KGEIEDYRLL TDILARCELK INITGIEDYH BACU013859/1-776 PISSAVAGVA IGLVTKNNPD KGEIEDYRLL TDIL------ ----GIEDYH ENSTTRP00000000027/1-729 PISSAVAGVA IGLVTKNNPD KGEIEDYRLL TDIL------ ----GIEDYH 551 600 ENSP00000400646/1-783 GDMDFKIAGT NKGITALQAD IKLPGIPIKI VMEAIQQASV AKKEILQIMN ENSBTAP00000011729/1-783 GDMDFKIAGT SKGITALQAD IKLPGIPIKI VMEAIQQASV AKKEILQIMN bmy_12810T0/1-779 GDMDFKIAGT TKGITALQAD IKLPGIPIKI VMEAIQQASA AKKEILQIMN BACU013859/1-776 GDMDFKIAGT TKGITALQAD IKLPGIPIKI VMEAIQQASA AKKEILQIMN ENSTTRP00000000027/1-729 GDMDFKIAGT TKGITALQAD IKLPGIPIKI VMEAIQQASV AKKEILQIMN 601 650 ENSP00000400646/1-783 KTISKPRASR KENGPVVETV QVPLSKRAKF VGPGGYNLKK LQAETGVTIS ENSBTAP00000011729/1-783 KTISKPRASR KENGPVVETV QVPLSKRAKF VGPGGYHLKK LQAETGVTIS bmy_12810T0/1-779 KTISKPRASR KENGPVVETV QVPLSKRAKF IGPGGYHLKK LQAETGVTIS BACU013859/1-776 KTISKPRASR KENGPVVETV QVPLSKRAKF IGPGGYHLKK LQAETGVTIS ENSTTRP00000000027/1-729 KTISKPRASR KENGPVVETV QVPLSKRAKF IGPGGYHLKK LQAETGVTIS 651 700 ENSP00000400646/1-783 QVDEETFSVF APTPSAMHEA RDFITEICKD DQEQQLEFGA VYTATITEIR ENSBTAP00000011729/1-783 QVDEETFSIF APTPSAMHEA RDFITDICRD DQEQQLEFGA VYTATITEIR bmy_12810T0/1-779 QVDEETFSIF APTPSAMHEA RDFITEICKD DQEQQLEFGA VYTATITEIR BACU013859/1-776 QVDEETFSIF APTPSAMHEA RDFITEICKD DQEQQLEFGA VYTATITEIR ENSTTRP00000000027/1-729 QVDEETFSIF APTPSAMHEA RDFITEICKD DQEQQLEFGA VYTATITEIR 701 750 ENSP00000400646/1-783 DTGVMVKLYP NMTAVLLHNT QLDQRKIKHP TALGLEVGQE IQVKYFGRDP ENSBTAP00000011729/1-783 DTGVMVKLYP NMTAVLLHNT QLDQRKIKHP SALGLEVGQE IQVKYFGRDP bmy_12810T0/1-779 DTGVMVKLYP NMTAVLLHNT QLDQRKIKHP TALGLEVGQE IQVKYFGRDP BACU013859/1-776 DTGVMVKLYP NMTAVLLHNT QLDQRKIKHP TALGLEVGQE IQVKYFGRDP ENSTTRP00000000027/1-729 DTGVMVKLYP NMTAVLLHNT QLDQRKIKHP TALGLEVGQE IQVKYFGRDP 751 800 ENSP00000400646/1-783 ADGRMRLSRK VLQSPATTVV RTLNDRSSIV MGEPISQSSS NSQ- ENSBTAP00000011729/1-783 ADGRMRLSRK VLQSPATTVV KTLNDRSSIV MGESVSQSSS NSP- bmy_12810T0/1-779 ADGRMRLSRK VLQSPATTVV KTLNDRSSIV MGESIS---- ---- BACU013859/1-776 ADGRMRLSRK VLQSPATTVV KTLNDRSSIV MRKSIS---- ---- ENSTTRP00000000027/1-729 ADGRMRLSRK VLQSPATTVV KTLSDRSSIV MGESIPQSSF NSSQ