KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:41 2014 Check: 00 .. Name: bmy_15442T0/1-256 Len: 322 Check: 9802 Weight: 1.00 Name: ENSP00000239849/1-317 Len: 322 Check: 7981 Weight: 1.00 Name: ENSTTRP00000009586/1-318 Len: 322 Check: 3391 Weight: 1.00 Name: BACU012165/1-245 Len: 322 Check: 9632 Weight: 1.00 Name: ENSBTAP00000011745/1-316 Len: 322 Check: 3574 Weight: 1.00 // 1 50 bmy_15442T0/1-256 ---MSRALMA YFGGFTSQAL NKSWQVLSLL FSEAPPPPKN SETIFPDVEV ENSP00000239849/1-317 MRRASRDYTK YLRGSEEMG- GGPGAPHEGP LHAPPPP--- -APHQPPAAS ENSTTRP00000009586/1-318 ---ASRDYTK YLRASEEMGS GGSGAPHEGA LHAPPPPPAQ PAPHHSAAAS BACU012165/1-245 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011745/1-316 MRRASRDYTK YLRGSEEMG- -GAGAPHEGP LHAPPPP--- -ATPAAAAAS 51 100 bmy_15442T0/1-256 P--FCQIPGQ G--------- -------KTK PGNSRNQGTI GNPKIMR--- ENSP00000239849/1-317 RSMFVALLGL GLGQVVCSVA LFFYFRAQMD PNRISEDGTH CIYRILRLHE ENSTTRP00000009586/1-318 RSTFVALLGL GLGQVACSVA LFLYFRAQMD PNRISEDDTH CINRIFKLHE BACU012165/1-245 ---------- ---------- -------MMD PNRISEDDTH CINRIFKLHE ENSBTAP00000011745/1-316 RSTFVALLGL GLGQVVCSVA LFLYFRAQMD PNRISEDDTH CINRIFKLHE 101 150 bmy_15442T0/1-256 -KDLGDWQSA GERNKSWME- -------WGE EQSLEMQHVV KSQHIRAEK- ENSP00000239849/1-317 NADFQDTTLE SQDTKLIPDS CRRIKQAFQG AVQKELQHIV GSQHIRAEKA ENSTTRP00000009586/1-318 NTDLQDTTLE SQDSKLVPDS CKRIKQAFQA AVQ-EMQHIV KSQHIRAEKA BACU012165/1-245 NTDLHDTTLE SQDSKLIPDS CKRIKQAFQA AVQKEMQHVV KSQHIRAEKA ENSBTAP00000011745/1-316 NTDLQDTTLE SQDSKLIPDS CKRIKQAFQA AVQKEMQHIV KSQHIRAEKA 151 200 bmy_15442T0/1-256 ---------- ---------- ---------- --GSHKVSLS CWYHDRGWAK ENSP00000239849/1-317 MVDGSWLDLA KRSKLEAQPF AHLTINATDI PSGSHKVSLS SWYHDRGWAK ENSTTRP00000009586/1-318 MVEGSWLDLV RRNKPETQPF AHLTINAIDI PSGSHKVSLS CWYHDRGWAK BACU012165/1-245 MVEGSWLDLA RRNKPETQPF AHLTINATDI PSGSHKVSLS CWYHDRGWAK ENSBTAP00000011745/1-316 MVEGSWLDLA RRNKPEIQPF AHLTINATDI PSGSHKVTLS CWYHDRGWAK 201 250 bmy_15442T0/1-256 ISNMTFSNGK LIVNQDGFYY LYANICFRHH ETSGNLTANY LQLMVYVTKT ENSP00000239849/1-317 ISNMTFSNGK LIVNQDGFYY LYANICFRHH ETSGDLATEY LQLMVYVTKT ENSTTRP00000009586/1-318 ISNMTFSNGK LIVNQDGFYY LYANICFRHH ETSGNLTANY LQLMVYVTKT BACU012165/1-245 ISNMTFSNGK LIVNQDGFYY LYANICFRHH ETSGNLTANY LQLMVYVTKT ENSBTAP00000011745/1-316 ISNMTFSNGK LIVNQDGFYY LYANICFRHH ETSGNLSANY LQLMVYVTKT 251 300 bmy_15442T0/1-256 SIKIPSSHTL MKGGSTKYWS GNSEFHFYSI NVGGFFKLRS GEKISIEVSN ENSP00000239849/1-317 SIKIPSSHTL MKGGSTKYWS GNSEFHFYSI NVGGFFKLRS GEEISIEVSN ENSTTRP00000009586/1-318 SIKIPSSHTL MKGGSTKYWS GNSEFHFYSI NVGGFFKLRS GEEISIEVSN BACU012165/1-245 SIKIPSSHTL MKGGSTKYWS GNSEFHFYSI NVGGFFKLRS GEKISIEVSN ENSBTAP00000011745/1-316 SIKIPSSHTL MKGGSTKYWL GNSEFHFYSI NVGGFFKLRS GEKISIEVSN 301 350 bmy_15442T0/1-256 PSLLDPDQDA TYFGAFKVRD ID ENSP00000239849/1-317 PSLLDPDQDA TYFGAFKVRD ID ENSTTRP00000009586/1-318 PSLLDPDQDA TYFGAFKVRD ID BACU012165/1-245 PSLLDPDQDA TYFGAFKVRD ID ENSBTAP00000011745/1-316 PSLLDPDQDA TYFGAFKVRD ID