KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:43 2014 Check: 00 .. Name: ENSBTAP00000011751/1-602 Len: 706 Check: 2155 Weight: 1.00 Name: ENSP00000359804/1-644 Len: 706 Check: 5886 Weight: 1.00 Name: BACU014792/1-445 Len: 706 Check: 782 Weight: 1.00 Name: bmy_13219T0/1-662 Len: 706 Check: 1140 Weight: 1.00 Name: ENSTTRP00000000088/1-655 Len: 706 Check: 5896 Weight: 1.00 // 1 50 ENSBTAP00000011751/1-602 ---------- ---------- ---------- ---------- ---------- ENSP00000359804/1-644 ---------- ---------- MADYSTVPPP SSGSAGGGGG GGGGGGVNDA BACU014792/1-445 MEELAERSLR RSGSGHCRVG MADYSTVPPP SSGSAGGGGG GGGGGGVNDA bmy_13219T0/1-662 ---------- ---------- MADYSTVPPP SSGSAGGGGG GGGGGGVNDA ENSTTRP00000000088/1-655 ---------- ---------- MADYSTVPPP SSGSAGGGGG GGGGGGVNDA 51 100 ENSBTAP00000011751/1-602 ---------K IAAKIGGDAG TSLNSNDYGY GGQKRPLEDG DQPDAKKVAP ENSP00000359804/1-644 FKDALQRARQ IAAKIGGDAG TSLNSNDYGY GGQKRPLEDG DQPDAKKVAP BACU014792/1-445 FKDALQRAR- ---------- ---------- ---------- ---------- bmy_13219T0/1-662 FKDALQRARQ IAAKIGGDAG TSLNSNDYGY GGQKRPLEDG DQPDAKKVAP ENSTTRP00000000088/1-655 FKDALQRARQ IAAKIGGDAG TSLNSNDYGY GGQKRPLEDG DQPDAKKVAP 101 150 ENSBTAP00000011751/1-602 QNDSFGTQLP PMHQQQ-RSV MTEEYKVPDG MVGFIIGRGG EQISRIQQES ENSP00000359804/1-644 QNDSFGTQLP PMHQQQSRSV MTEEYKVPDG MVGFIIGRGG EQISRIQQES BACU014792/1-445 ---------- ---------- ---------- ---------- ---------- bmy_13219T0/1-662 QNDSFGTQLP PMHQQQSRSV MTEEYKVPDG MVGFIIGRGG EQISRIQQES ENSTTRP00000000088/1-655 QNDSFGTQLP PMHQQQSRSV MTEEYKVPDG MVGFIIGRGG EQISRIQQES 151 200 ENSBTAP00000011751/1-602 GCKIQIAPDS GGLPERSCML TGTPESVQSA KRLLD-IVEK GRPAPGFHHG ENSP00000359804/1-644 GCKIQIAPDS GGLPERSCML TGTPESVQSA KRLLDQIVEK GRPAPGFHHG BACU014792/1-445 ---------- ---------- ---------- ---------- ---------- bmy_13219T0/1-662 GCKIQIAPDS GGLPER---- --------SA KRLLDQIVEK GRPAPGFHHG ENSTTRP00000000088/1-655 GCKIQIAPDS GGLPERSCML TGTPESVQSA KRLLDQIVEK GRPAPGFHHG 201 250 ENSBTAP00000011751/1-602 DGP-KCSSEI MIPASKAGLV -GKGGETINN SEERAGVKMV MIQDGPQNTG ENSP00000359804/1-644 DGPGNAVQEI MIPASKAGLV IGKGGETIKQ LQERAGVKMV MIQDGPQNTG BACU014792/1-445 ---------- ---------- ---------- -QERAGVKMV MIQDGPQNTG bmy_13219T0/1-662 DGPGNAVQEI MIPASKAGLV IGKGGETIKQ LQERAGVKMV MIQDGPQNTG ENSTTRP00000000088/1-655 DGPGNAVQEI MIPASKAGLV IGKGGETIKQ LQERAGVKMV MIQDGPQNTG 251 300 ENSBTAP00000011751/1-602 ADKPLRITGD PYKVQQAKEM VLELIRDQGG FREVRNEYGS RIGGNEGIDV ENSP00000359804/1-644 ADKPLRITGD PYKVQQAKEM VLELIRDQGG FREVRNEYGS RIGGNEGIDV BACU014792/1-445 ADKPLRITGD PYKVQQAKEM VLELIRDQGG FREVRNEYGS RIGGNEGIDV bmy_13219T0/1-662 ADKPLRITGD PYKVQQAKEM VLELIRDQGG FREVRNEYGS RIGGNEGIDV ENSTTRP00000000088/1-655 ADKPLRITGD PYKVQQAKEM VLELIRDQGG FREVRNEYGS RIGGNEGIDV 301 350 ENSBTAP00000011751/1-602 PIPRFAVGIV IGRNGEMIKK IQNDAGVRIQ FKPDDGTTPD RIAQITGPPD ENSP00000359804/1-644 PIPRFAVGIV IGRNGEMIKK IQNDAGVRIQ FKPDDGTTPE RIAQITGPPD BACU014792/1-445 PIPRFAVGIV IGRNGEMIKK IQNDAGVRIQ FKPDDGTTPD RIAQITGPPD bmy_13219T0/1-662 PIPRFAVGIV IGRNGEMIKK IQNDAGVRIQ FKPDDGTTPD RIAQITGPPD ENSTTRP00000000088/1-655 PIPRFAVGIV IGRNGEMIKK IQNDAGVRIQ FKPDDGTTPD RIAQITGPPD 351 400 ENSBTAP00000011751/1-602 RCQHAAEIIT DLLRSVQAGN PGGPGPGGRG RGRGQGNWNM GPPGGLQEFN ENSP00000359804/1-644 RCQHAAEIIT DLLRSVQAGN PGGPGPGGRG RGRGQGNWNM GPPGGLQEFN BACU014792/1-445 RCQHAAEIIT DLLRSVQAGN PGGPGPGGRG R--------- ---------- bmy_13219T0/1-662 RCQHAAEIIT DLLRSVQAGN PGGPGPGGRG RGRGQGNWNM GPPGGLQEFN ENSTTRP00000000088/1-655 RCQHAAEIIT DLLRSVQAGN PGGPGPGGRG RGRGQGNWNM GPPGGLQEFN 401 450 ENSBTAP00000011751/1-602 FIVPTGKTGL IIGK------ ----GGETIK SISQQSGARI ELQRNPPPNA ENSP00000359804/1-644 FIVPTGKTGL IIGK------ ----GGETIK SISQQSGARI ELQRNPPPNA BACU014792/1-445 ---------- ---------- ----GGETIK SISQQSGARI ELQRNPPPNA bmy_13219T0/1-662 FIVPTGKTGL IIGKGNRNYC ALILGGETIK SISQQSGARI ELQRNPPPNA ENSTTRP00000000088/1-655 FIVPTGKTGL IIGK------ ----GGETIK SISQQSGARI ELQRNPPPNA 451 500 ENSBTAP00000011751/1-602 DPNMKLFTIR GTPQQIDYAR QLIEEKIGGP VNPLGPPVPH GPHGVPGPHG ENSP00000359804/1-644 DPNMKLFTIR GTPQQIDYAR QLIEEKIGGP VNPLGPPVPH GPHGVPGPHG BACU014792/1-445 DPNMKLFTIR GTPQQIDYAR QLIEEKIGGP VNPLGPPVPH GPHGVPGPHG bmy_13219T0/1-662 DPNMKLFTIR GTPQQIDYAR QLIEEKIGGP VNPLGPPVPH GPHGVPGPHG ENSTTRP00000000088/1-655 DPNMKLFTIR GTPQQIDYAR QLIEEKIGGP VNPLGPPVPH GPHGVPGPHG 501 550 ENSBTAP00000011751/1-602 PPGPPGPGTP MGPYNPAPYN PGPPGPAPHG PPAPYAPQGW GNAYPHWQQQ ENSP00000359804/1-644 PPGPPGPGTP MGPYNPAPYN PGPPGPAPHG PPAPYAPQGW GNAYPHWQQQ BACU014792/1-445 PPGPPGPGTP MGPYNPAPYN PGPPGPAPHG PPAPYAPQGW GNAYPHWQQQ bmy_13219T0/1-662 PPGPPGPGTP MGPYNPAPYN PGPPGPAPHG PPAPYAPQGW GNAYPHWQQQ ENSTTRP00000000088/1-655 PPGPPGPGTP MGPYNPAPYN PGPPGPAPHG PPAPYAPQGW GNAYPHWQQQ 551 600 ENSBTAP00000011751/1-602 APPDPAKTGT DPNSAAWAAY YAHYYQQQAQ PPPAAPAGAP TTTQTNGQEG ENSP00000359804/1-644 APPDPAKAGT DPNSAAWAAY YAHYYQQQAQ PPPAAPAGAP TTTQTNGQ-G BACU014792/1-445 APPDPAKTGT DPNSAAWAAY YAHYYQQQAQ PPPAAPAGAP TTTQTNGQ-- bmy_13219T0/1-662 APPDPAKTGT DPNSAAWAAY YAHYYQQQAQ PPPAAPAGAP TTTQTNGQ-G ENSTTRP00000000088/1-655 APPDPAKTGT DPNSAAWAAY YAHYYQQQAQ PPPAAPAGAP TTTQTNGQ-G 601 650 ENSBTAP00000011751/1-602 DQQNPAPAGQ VDYTKAWEEY YKKM------ ---------- ----GQAVPA ENSP00000359804/1-644 DQQNPAPAGQ VDYTKAWEEY YKKM------ ---------- ----GQAVPA BACU014792/1-445 ---------- ---------- ---------- ---------- ----GQAVPA bmy_13219T0/1-662 DQQNPAPAGQ VDYTKAWEEY YKKMGQQGQT QDYSKAWEEY YKKQGQAVPA ENSTTRP00000000088/1-655 DQQNPAPAGQ VDYTKAWEEY YKKM------ ---------- ----GQAVPA 651 700 ENSBTAP00000011751/1-602 PTGAPPGGQP DYSAAWAEYY RQQAAYYAQT SPQGMPQHPP APQGQ----- ENSP00000359804/1-644 PTGAPPGGQP DYSAAWAEYY RQQAAYYAQT SPQGMPQHPP APQGQ----- BACU014792/1-445 PTGAPPGGQP DYSAAWAEYY RQQAAYYAQT SPQGMPQHPP APQGFANHAR bmy_13219T0/1-662 PTGAPPGGQP DYSAAWAEYY RQQAAYYAQT SPQGMPQHPP APQGQ----- ENSTTRP00000000088/1-655 PTGAPPGGQP DYSAAWAEYY RQQAAYYAQT SPQGMPQHPP APQGFANHAR 701 750 ENSBTAP00000011751/1-602 ------ ENSP00000359804/1-644 ------ BACU014792/1-445 SHHHLY bmy_13219T0/1-662 ------ ENSTTRP00000000088/1-655 SHHHLY