KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:43 2014 Check: 00 .. Name: ENSP00000359540/1-220 Len: 246 Check: 7715 Weight: 1.00 Name: ENSBTAP00000011757/1-221 Len: 246 Check: 685 Weight: 1.00 Name: BACU019464/1-229 Len: 246 Check: 3307 Weight: 1.00 Name: ENSTTRP00000008092/1-242 Len: 246 Check: 2270 Weight: 1.00 Name: bmy_11462T0/1-166 Len: 246 Check: 3798 Weight: 1.00 // 1 50 ENSP00000359540/1-220 ---------- ---------- -----MAGLS RGSARALLAA LLASTLLALL ENSBTAP00000011757/1-221 ---------- ---------- -----MAGCA CGFVRAVLAF LLAPALVTLL BACU019464/1-229 ---------- ---VAGLRTL AGVIAMAGCA RGSARAVLAF LMAPALVALL ENSTTRP00000008092/1-242 GGGAWARLAP WASVIGLRTL EGVTAMAGRA RGSARAVLAF LLVPALVALL bmy_11462T0/1-166 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000359540/1-220 VSPARGRGGR DHGDWDEASR -LPPLPPRED AARVARFVTH VSDWGALATI ENSBTAP00000011757/1-221 VAPARGRGGR GHGDWDAAEL LLPPLPPREN AALVARFVTN VCDWGALATI BACU019464/1-229 VAPARGRGGR GHGDWGAAEL ----LPPREN AALVARFVTN VCDWGALATI ENSTTRP00000008092/1-242 VAPARGRGGR GHGDWGAAEQ ----LPPREN AALVARFVTN VCDWGALATI bmy_11462T0/1-166 ---------- ---------- ---------N AALVARFVTN VCDWGALATI 101 150 ENSP00000359540/1-220 STLEAVRGRP FADVLSLSDG PPGAGSGVPY FYLSPLQLSV SNLQENPYAT ENSBTAP00000011757/1-221 STQEGVRGRP FADVLSLSDG PPGKGSGVPY FYLSPLQQSV GNLQENPYAT BACU019464/1-229 STQEGVRGRP FANVLSLSDG PPAKGSGVPY FYLSPLQQSV GNLKENPYAT ENSTTRP00000008092/1-242 STQEGVRGRP FADVLSLSDG PPAKGSGVPY FYLSPMQQSV GNLKENPYAT bmy_11462T0/1-166 STQEGVRGRP FADVLSLSDG PPAKGSGVPY FYLSPMQQSV GNLKENPYAT 151 200 ENSP00000359540/1-220 LTMTLAQTNF CKKHGFDPQS PLCVHIMLSG TVTKVNETEM DIAKHSLFIR ENSBTAP00000011757/1-221 LTMSLAETNF CRKYGFDPQS PLCAHIILSG TVIKVSETEM DVAKNSLFIR BACU019464/1-229 LTMSLAETSF CRKYGFDPQS PLCAHIILSG TVIKVSEAEM DVAKNSLFIR ENSTTRP00000008092/1-242 LTMSLAETSF CRKYGFDPQS PLCAHIILSG TVIKVSEAEM DVARNSLFIR bmy_11462T0/1-166 LTMSLAETSF CRKYGFDPQS PLCAHIILSG TVIKVSEAEM DVAKNSLFIR 201 250 ENSP00000359540/1-220 HPEMKTWPSS HNWFFAKLNI TNIWVLDYFG GPKIVTPEEY YNVTVQ ENSBTAP00000011757/1-221 HPEMKTWPSS HNWFFAKLNI TNIWVLDYFG GPKIVTPAEY YNATSQ BACU019464/1-229 HPEMKTWPSS HNWFFAKLNI TNIWVLDYFG GPKIVTPEEY YNATFQ ENSTTRP00000008092/1-242 HPEMKTWPSS HNWFFAKLNI TNIWVLDYFG GPKIVTPEEY YNATFQ bmy_11462T0/1-166 HPEMKTWPSS HNWFFAKLNI TNIWVLDYFG GPKIVTPEEY YNATF-