KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:47 2014 Check: 00 .. Name: ENSTTRP00000013911/1-503 Len: 655 Check: 6855 Weight: 1.00 Name: bmy_18209T0/1-272 Len: 655 Check: 8579 Weight: 1.00 Name: ENSP00000389951/1-521 Len: 655 Check: 7461 Weight: 1.00 Name: BACU020231/1-494 Len: 655 Check: 862 Weight: 1.00 Name: ENSBTAP00000011768/1-397 Len: 655 Check: 5078 Weight: 1.00 // 1 50 ENSTTRP00000013911/1-503 ---------- ---------- -----NGTAN KMNGALDHSD QPDPDAIKMF bmy_18209T0/1-272 ---------- ---------- ---------- ---------- ---------- ENSP00000389951/1-521 MTSAFKLDFL PDMMVEGRLL VPDRINGTAN KMNGALDHSD QPDPDAIKMF BACU020231/1-494 ---------- ---------- -----NGTAN KMNGALDHSD QPDPDAIKMF ENSBTAP00000011768/1-397 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013911/1-503 VGQIPRSWSE KELKELFEPY GAVYQINVLR DRSQNPPQSK XXXXXXXXXX bmy_18209T0/1-272 ---------- ---------- ---------- ---------- ---------- ENSP00000389951/1-521 VGQIPRSWSE KELKELFEPY GAVYQINVLR DRSQNPPQSK GCCFVTFYTR BACU020231/1-494 VGQIPRSWSE KELKELFEPY GAVYQINVLR DRSQNPPQSK GTDSGARARD ENSBTAP00000011768/1-397 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000013911/1-503 XXXXXXXXXX XXXXXXXXMH HPIQMKPADS EKSNAVEDRK LFIGMVSKKC bmy_18209T0/1-272 ---------- ---------- ---------- ---------- ---------- ENSP00000389951/1-521 KAALEAQNAL HNIKTLPGMH HPIQMKPADS EKSNAVEDRK LFIGMVSKKC BACU020231/1-494 EKTEGHKKLR DIAQFTQLMH HPIQMKPADS EKSNAVEDRK LFIGMVSKKC ENSBTAP00000011768/1-397 ---------- --------MH HPIQMKPADS EKSNAVEDRK LFIGMVSKKC 151 200 ENSTTRP00000013911/1-503 NENDIRVMFS PFGQIEECRI LRGPDGLSRG CAFVTFSTRA MAQNAIKAMH bmy_18209T0/1-272 ---------- ---------- ---------- ---------- ---------- ENSP00000389951/1-521 NENDIRVMFS PFGQIEECRI LRGPDGLSRG CAFVTFSTRA MAQNAIKAMH BACU020231/1-494 NENDIRVMFS PFGQIEECRI LRGPDGLSRG CAFVTFSTRA MAQNAIKAMH ENSBTAP00000011768/1-397 NENDIRVMFS PFGQIEECRI LRGPDGLSRG CAFVTFSTRA MAQNAIKAMH 201 250 ENSTTRP00000013911/1-503 QSQTMEGCSS PIVVKFADTQ KDKEQRRLQQ QLAQQMQQLN TATWGNLTGL bmy_18209T0/1-272 ---------- ---------- ---------- ---------- ---------- ENSP00000389951/1-521 QSQTMEGCSS PIVVKFADTQ KDKEQRRLQQ QLAQQMQQLN TATWGNLTGL BACU020231/1-494 QSQTMEGCSS PIVVKFADTQ KDKEQRRLQQ QLAQQMQQLN TATWGNLTGL ENSBTAP00000011768/1-397 QSQTMEGCSS PIVVKFADTQ KDKEQRRLQQ QLAQQMQQLN TATWGNLTGL 251 300 ENSTTRP00000013911/1-503 GGLTPQYLAL LQQATSSSNL GAFSGIQQMA GMNALQLQNL ATLAAAAAAA bmy_18209T0/1-272 ---------- ---------- ---------- ---------- ---------- ENSP00000389951/1-521 GGLTPQYLAL LQQATSSSNL GAFSGIQQMA GMNALQLQNL ATLAAAAAAA BACU020231/1-494 GGLTPQYLAL LQQATSSSNL GAFSGIQQMA GMNALQLQNL ATLAAAAAAA ENSBTAP00000011768/1-397 GGLTPQYLAL LQQATSSSNL GAFSGIQQMA GMNALQLQNL ATLAAAAAAA 301 350 ENSTTRP00000013911/1-503 QTSATTTNAN PLSTTSSALG ALTSPVAAST PNSTAGAAMN SLTSLGTLQG bmy_18209T0/1-272 ---------- ---------- ---------- ---------- ---------- ENSP00000389951/1-521 QTSATSTNAN PLSTTSSALG ALTSPVAAST PNSTAGAAMN SLTSLGTLQG BACU020231/1-494 QTSATTTNAN PLSTTSSALG ALTSPVAAST PNSTAGAAMN SLTSLGTLQG ENSBTAP00000011768/1-397 QTSATTTNAN PLSTTSSALG ALTSPVAAST PNSTAGAAMN SLTSLGTLQG 351 400 ENSTTRP00000013911/1-503 LAGATVGLNN INALAGTITL SGRSLLLQKE NPSMAALNGG LGATGLTNGT bmy_18209T0/1-272 ---------- ---------- ---------- ---MAALNGG LGATGLTNGT ENSP00000389951/1-521 LAGATVGLNN INALAVAQML SG-------- ---MAALNGG LGATGLTNGT BACU020231/1-494 LAGATVGLNN INALAGTINS ---------- ---MAALNGG LGATGLTNGT ENSBTAP00000011768/1-397 LAGATVGLNN INALAG---- ---------- ---MAALNGG LGATGLTNGT 401 450 ENSTTRP00000013911/1-503 AGTMDALTQA YSGIQQYAAA ALPTLYSQSL LQQQSAAGSQ K--------- bmy_18209T0/1-272 AGTMDALTQA YSGIQQYAAA ALPTLYSQSL LQQQSAAGSQ KEERYFSVYI ENSP00000389951/1-521 AGTMDALTQA YSGIQQYAAA ALPTLYSQSL LQQQSAAGSQ K--------- BACU020231/1-494 AGTMDALTQA YSGIQQYAAA ALPTLYSQSL LQQQSAAGSQ K--------- ENSBTAP00000011768/1-397 AGTMDALTQA YSGIQQYAAA ALPTLYSQSL LQQQSAAGSQ K--------- 451 500 ENSTTRP00000013911/1-503 ---------- ---------- ---------- ---------- ---------- bmy_18209T0/1-272 NIWGPNPKLG LTFLCKDVYP FYLYKVISTP VLFLFGPYKW TLSRQLLGTQ ENSP00000389951/1-521 ---------- ---------- ---------- ---------- ---------- BACU020231/1-494 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011768/1-397 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000013911/1-503 ---------- ---------E GPEGANLFIY HLPQEFGDQD ILQMFMPFGN bmy_18209T0/1-272 GTLSPGASQW SRQSWFLSCE SPEGANLFIY HLPQEFGDQD ILQMFMPFGN ENSP00000389951/1-521 ---------- ---------E GPEGANLFIY HLPQEFGDQD ILQMFMPFGN BACU020231/1-494 ---------- ---------E GPEGANLFIY HLPQEFGDQD ILQMFMPFGN ENSBTAP00000011768/1-397 ---------- ---------E GPEGANLFIY HLPQEFGDQD ILQMFMPFGN 551 600 ENSTTRP00000013911/1-503 VISAKVFIDK QTNLSKCF-- ---------- ---------- ---------- bmy_18209T0/1-272 VISAKVFIDK QTNLSKCFGQ LGIQGSSFHS AEFTGALKME VEIRRTAQHF ENSP00000389951/1-521 VISAKVFIDK QTNLSKCF-- ---------- ---------- ---------- BACU020231/1-494 VISAKVFIDK QTNLSKCF-- ---------- ---------- ---------- ENSBTAP00000011768/1-397 VISAKVFIDK QTNLSKCF-- ---------- ---------- ---------- 601 650 ENSTTRP00000013911/1-503 ---------- ---GFVSYDN PVSAQAAIQA MNGFQIGMRL VQLR----SN bmy_18209T0/1-272 PWAPRFLSVT APSGFVSYDN PVSAQAAIQA MNGFQIGMKR LKVQLKRSKN ENSP00000389951/1-521 ---------- ---GFVSYDN PVSAQAAIQA MNGFQIGMKR LKVQLKRSKN BACU020231/1-494 ---------- ---GFVSYDN PVSAQAAIQA MNGFQIGMKR LKVQLKRSKN ENSBTAP00000011768/1-397 ---------- ---GFVSYDN PVSAQAAIQA MNGFQIGMKR LKVQLKRSKN 651 700 ENSTTRP00000013911/1-503 DSKPY bmy_18209T0/1-272 DSKPY ENSP00000389951/1-521 DSKPY BACU020231/1-494 DSKPY ENSBTAP00000011768/1-397 DSKPY