KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:48 2014 Check: 00 .. Name: ENSTTRP00000010384/1-705 Len: 710 Check: 5313 Weight: 1.00 Name: ENSP00000264051/1-710 Len: 710 Check: 4761 Weight: 1.00 Name: ENSBTAP00000011773/1-581 Len: 710 Check: 4141 Weight: 1.00 Name: bmy_18161T0/1-433 Len: 710 Check: 3679 Weight: 1.00 Name: BACU010987/1-706 Len: 710 Check: 1770 Weight: 1.00 // 1 50 ENSTTRP00000010384/1-705 METRDSADLG KPQKKSVSGS WEIG-ELASV RPEVLSE-EG TPHANQEMQD ENSP00000264051/1-710 METRESEDLE KTRRKSASDQ WNTDNEPAKV KPELLPEKEE TSQADQDIQD ENSBTAP00000011773/1-581 ---------- ---------- ---------- ---------- ---------- bmy_18161T0/1-433 ---------- ---------- ---------- ---------- ---------- BACU010987/1-706 METRDSEDLG KPQKKSVSGS WEID-ELASV RPEVLSE-ER TPHADQEMQD 51 100 ENSTTRP00000010384/1-705 KAPHYYIPIQ RNSIFNRTVR HRSKGKARGT PEQNCGHLAD SLENGNSVNE ENSP00000264051/1-710 KEPHCHIPIK RNSIFNRSIR RKSKAKARDN PERNASCLAD SQDNGKSVNE ENSBTAP00000011773/1-581 ---------- ---------- ---------- ---------- ---------- bmy_18161T0/1-433 ---------- ---------- ---------- ---------- ---------- BACU010987/1-706 KAPHYYTLIQ RNSIFNRTVR HRSKGKARGT PEQNCRHLAD TLENGNSVNE 101 150 ENSTTRP00000010384/1-705 PLNLNFPQSR TRPWRIPTRT DLGAKRASES SSTLGNEATP EECPAL-DSP ENSP00000264051/1-710 PLTLNIPWSR MPPCRTAMQT DPGAQEMSES SSTPGNGATP EEWPALADSP ENSBTAP00000011773/1-581 ---------- ---------- -------SES SSTPGNGATP EEFPALADSP bmy_18161T0/1-433 ---------- ---------- ---------- ---------- ---------- BACU010987/1-706 PLNLNFPQSR TRPWRIPTGT DLGAKRASES SSTLGNEATP EECPALADSP 151 200 ENSTTRP00000010384/1-705 TTLTEALQMI HPIPSDSWRN LIEQIGLLYQ EYRDKSTLQE IETRRQQDAE ENSP00000264051/1-710 TTLTEALRMI HPIPADSWRN LIEQIGLLYQ EYRDKSTLQE IETRRQQDAE ENSBTAP00000011773/1-581 TTLTEALQMI HPIPADSWRN LIEQIGLLYQ EYRDKSTLQE IETRRQQDAE bmy_18161T0/1-433 ---------- ---------- ---------- ---------- ---------- BACU010987/1-706 TTLTEALQMI HPIPADSWRN LIEQIGLLYQ EYRDKSTLQE IETRRQQDAE 201 250 ENSTTRP00000010384/1-705 IQDNADGSPA SVETP--EED EGEEEEPASP PERKAVPQIC LLSNPHSRFN ENSP00000264051/1-710 IEDNTNGSPA SEDTPEEEEE EEEEEEPASP PERKTLPQIC LLSNPHSRFN ENSBTAP00000011773/1-581 IQGAADGCPS SEEAP--EED EGEEEEPASP PERKALPQIC LLSNPHSRFN bmy_18161T0/1-433 ---------- ---------- ---------- ---------- ---------- BACU010987/1-706 IQGNVDGSPA SEETP--EED EEEEEEPASP PERKAVPQIC LLSNPHSRFN 251 300 ENSTTRP00000010384/1-705 LWQDLPEIRS SGVLDILQPE EIRLQEAMFE LVTSEASYYK SLNLLVSHFM ENSP00000264051/1-710 LWQDLPEIRS SGVLEILQPE EIKLQEAMFE LVTSEASYYK SLNLLVSHFM ENSBTAP00000011773/1-581 LWQDLPEIQS SGVLDILQPE EIRLQEAMFE LITSEASYYK SLNLLVSHFM bmy_18161T0/1-433 ---------- ---------- -------MFE LVTSEASYYK SLNLLVSHFM BACU010987/1-706 LWQDLPEIRS SGVLDLLQPE EIRLQEAMFE LVTSEASYYK SLNLLVSHFM 301 350 ENSTTRP00000010384/1-705 ENERLKKILH PSEAHILFSN VLDVMAVSER FLLELERRME ENIVISDVCD ENSP00000264051/1-710 ENERIRKILH PSEAHILFSN VLDVLAVSER FLLELEHRME ENIVISDVCD ENSBTAP00000011773/1-581 ENERLKKILH PSEAHILFSN VLDVMAVSER FLLELERRME ENIVISDVCD bmy_18161T0/1-433 ENERLKKILH PSEAHILFSN VLDVMAVSER FLLELERRME ENIVISDVCD BACU010987/1-706 ENERLKKILH PSEAHILFSN VLDVMAVSER FLLELERRME ENIVISDVCD 351 400 ENSTTRP00000010384/1-705 IVYLYAADHF SVYITYVSNQ TYQERTYKQL LQEKAAFREL ITQLELDPKC ENSP00000264051/1-710 IVYRYAADHF SVYITYVSNQ TYQERTYKQL LQEKAAFREL IAQLELDPKC ENSBTAP00000011773/1-581 IVYRYAADHF SVYITYVSNQ TYQERTYKQL LQEKAAFREL IAQLELDPKC bmy_18161T0/1-433 IVYLYAADHF SVYITYVSNQ TYQERTYKQL LQEKAAFREL IAQLELDPKC BACU010987/1-706 IVYLYAADHF SVYITYVSNQ TYQERTYKQL LQEKAAFREL IAQLELDPKC 401 450 ENSTTRP00000010384/1-705 RGLPLSSFLI LPFQRITRLK LLVQNILKRV EERSEREGTA LGAHKELELV ENSP00000264051/1-710 RGLPFSSFLI LPFQRITRLK LLVQNILKRV EERSERECTA LDAHKELEMV ENSBTAP00000011773/1-581 RGLPLSSFLI LPFQRITRLK LLVQNILKRV EERSEREGTA LDAHKELELV bmy_18161T0/1-433 KGLPLSSFLI LPFQRITRLK LLVQNILKRV EERSEREGTA LDAHKELELV BACU010987/1-706 RGLPLSSFLI LPFQRITRLK LLVQNILKRV EERSEREGTA LDAHKELELV 451 500 ENSTTRP00000010384/1-705 VKACNEGVRK MSRTEQMISI QKKMEFKIKS VPIISHSRWL LKQGELQQMS ENSP00000264051/1-710 VKACNEGVRK MSRTEQMISI QKKMEFKIKS VPIISHSRWL LKQGELQQMS ENSBTAP00000011773/1-581 VKACNEGVRK MSRTEQMISI QKKMEFKIKS VPIISHSRWL LKQGELQQMS bmy_18161T0/1-433 VKACNEGVRK MSRTEQMISI QKKMEFKIKS VPIISHSRWL LKQGELQQMS BACU010987/1-706 VKACNEGVRK MSRTEQMISI QKKMEFKIKS VPIISHSRWL LKQGELQQMS 501 550 ENSTTRP00000010384/1-705 GPKTSRTLRT KKLFREIYLF LFNDLLVICR QIPGDKYQVF DSAPRGLLRV ENSP00000264051/1-710 GPKTSRTLRT KKLFHEIYLF LFNDLLVICR QIPGDKYQVF DSAPRGLLRV ENSBTAP00000011773/1-581 GPKTSRTLRT KKLFREIYLF LFNDLLVICR QIPGDKYQVF DSAPRGLLRA bmy_18161T0/1-433 GPKTSRTLRT KKLFREIYLF LFNDLLVICR QIPGDKYQVF DSAPRGLLRV BACU010987/1-706 GPKTSRTLRT KKLFREIYLF LFNDLLVICR QIPGDKYQVF DSAPRGLLRV 551 600 ENSTTRP00000010384/1-705 EELEDQGQTL ANVFILRLLE NADDREATYM LKASSQSEMK RWMTSLAPNR ENSP00000264051/1-710 EELEDQGQTL ANVFILRLLE NADDREATYM LKASSQSEMK RWMTSLAPNR ENSBTAP00000011773/1-581 EELEDQGQTL ANVFILRLLE NSDDREATYM LKASSQSEMK RWMTSLAPNR bmy_18161T0/1-433 EELEDQGQTL ANVFILRLLE NADDREATYM LKASAQSEMK RWMTSLAPNR BACU010987/1-706 EELEDQGQTL ANVFILRLLE NADDREATYM LKASAQSEMK RWMTSLAPNR 601 650 ENSTTRP00000010384/1-705 RTKFVSFTSR LLXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXWI ENSP00000264051/1-710 RTKFVSFTSR LLDCPQVQCV HPYVAQQPDE LTLELADILN ILDKTDDGWI ENSBTAP00000011773/1-581 RTKFVSFTSR LLDCPQVQCV HPYVAQQPDE LTLELADILN ILDKTEDGWI bmy_18161T0/1-433 RTKFVSFTSR LLDCPQVQCV HPYVAQQPDE LTLELADILN ILDKTEDGWI BACU010987/1-706 RTKFVSFTSR LLDCPQVQCV HPYVAQQPDE LTLELADILN ILDKTEDGWI 651 700 ENSTTRP00000010384/1-705 FGERLHDQER GWFPSSMTEE ILNPKIRSQN LKECFRVHKM DDPQRSQNKD ENSP00000264051/1-710 FGERLHDQER GWFPSSMTEE ILNPKIRSQN LKECFRVHKM DDPQRSQNKD ENSBTAP00000011773/1-581 FGERLHDQER GWFPSNMTEE ILNPKIRSQN LKECFRVHKM DDPQRSQNKD bmy_18161T0/1-433 FGERLHDQER GWFPSNMTEE ILNPKIRSQN LKECFRVHKM DDPQRSQNKD BACU010987/1-706 FGERLHDQER GWFPSNTTEE ILNPKIRSQN LKECFRVHKM DDPQRSQNKD 701 750 ENSTTRP00000010384/1-705 RRKLGSRNRQ ENSP00000264051/1-710 RRKLGSRNRQ ENSBTAP00000011773/1-581 RRKLGSRNRQ bmy_18161T0/1-433 RRKLGSRNRQ BACU010987/1-706 RRKLGSRTRQ