KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:53 2014 Check: 00 .. Name: bmy_14583T0/1-336 Len: 350 Check: 206 Weight: 1.00 Name: BACU008389/1-284 Len: 350 Check: 363 Weight: 1.00 Name: ENSBTAP00000011802/1-249 Len: 350 Check: 6573 Weight: 1.00 Name: ENSP00000367743/1-249 Len: 350 Check: 5924 Weight: 1.00 Name: ENSTTRP00000003975/1-249 Len: 350 Check: 5814 Weight: 1.00 // 1 50 bmy_14583T0/1-336 MSVRMSCSAV GKLRERRAGE LKTQSQPLAS AAKAPGVCGL QGMESQAWRA BACU008389/1-284 ---------- ---------- ---------- -------MRK PKSVTHCLIS ENSBTAP00000011802/1-249 ---------- ---------- ---------- ---------- ---------- ENSP00000367743/1-249 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003975/1-249 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_14583T0/1-336 APSLCPEVRA RVMQGSVVQT HCGDFLRADQ RDLTNRNPTA SACLLAETGV BACU008389/1-284 EFEVSEDLRR KIALASSEPT HSSHPRAGEV ---------- ---------- ENSBTAP00000011802/1-249 ---------- ---------- --MASRRMET ---------- ---------- ENSP00000367743/1-249 ---------- ---------- --MASRRMET ---------- ---------- ENSTTRP00000003975/1-249 ---------- ---------- --MASRRMET ---------- ---------- 101 150 bmy_14583T0/1-336 FRFRPHCSVL ILTSLSSSLT LLTPASFQIT GVILLAVGVW GKLTLGTYIS BACU008389/1-284 ---KRICPLL ------CTPW VLIKAHVGIT GVILLAVGVW GKLTLGTYIS ENSBTAP00000011802/1-249 ---KPVITCL ------KTLL IIYSFVFWIT GVILLAVGVW GKLTLGTYIS ENSP00000367743/1-249 ---KPVITCL ------KTLL IIYSFVFWIT GVILLAVGVW GKLTLGTYIS ENSTTRP00000003975/1-249 ---KPVITCL ------KTLL IIYSFVFWIT GVILLAVGVW GKLTLGTYIS 151 200 bmy_14583T0/1-336 LIAENSTNAP YVLIGTGTTI VVFGLFGCFA TCRGSPWMLK LYAMFLSLVF BACU008389/1-284 LIAENSTNAP YVLIGTGTTI VVFGLFGCFA TCRGSPWMLK LYAMFLSLVF ENSBTAP00000011802/1-249 LIAENSTNAP YVLIGTGTTI VVFGLFGCFA TCRGSPWMLK LYAMFLSLVF ENSP00000367743/1-249 LIAENSTNAP YVLIGTGTTI VVFGLFGCFA TCRGSPWMLK LYAMFLSLVF ENSTTRP00000003975/1-249 LIAENSTNAP YVLIGTGTTI VVFGLFGCFA TCRGSPWMLK LYAMFLSLVF 201 250 bmy_14583T0/1-336 LAELVAGISG FVFRHEIKDT FLRTYTDAMQ NYNGNDERSR AVDHVQRSLS BACU008389/1-284 LAELVAGISG FVFRHEIKDT FLRTYTDAMQ NYNGNDERSR AVDHVQRSLS ENSBTAP00000011802/1-249 LAELVAGISG FVFRHEIKDT FLRTYTDAMQ NYNGNDERSR AVDHVQLSLS ENSP00000367743/1-249 LAELVAGISG FVFRHEIKDT FLRTYTDAMQ TYNGNDERSR AVDHVQRSLS ENSTTRP00000003975/1-249 LAELVAGISG FVFRHEIKDT FLRTYTDAMQ NYNGNDERSR AVDHVQRSLS 251 300 bmy_14583T0/1-336 CCGVQNYTNW STSPYFLEHG IPPSCCMNDT DCNPQDLHNL TVAATKVNQK BACU008389/1-284 CCGVQNYTNW STSPYFLEHG IPPSCCMNDT DCNPQDLHNL TVAATKVNQK ENSBTAP00000011802/1-249 CCGVQNYTNW STSPYFLEHG VPSSCCMNDT YCNPQDLHNL TVAATKVNQK ENSP00000367743/1-249 CCGVQNYTNW STSPYFLEHG IPPSCCMNET DCNPQDLHNL TVAATKVNQK ENSTTRP00000003975/1-249 CCGVQNYTNW STSPYFLEHG IPPSCCMNDT DCNPQDLHNL TVAATKVNQK 301 350 bmy_14583T0/1-336 GCYDLVTSFM ETNMGIIAGV AFGIAFSQF- ---------- ---CHQGNIG BACU008389/1-284 GCYDLVTSFM ETNMGIIAGV AFGIAFSQLI GMLLACCLSR FITANQYEMV ENSBTAP00000011802/1-249 GCYDLVTSFM ETNMGIIAGV AFGIAFSQLI GMLLACCLSR FITANQYEMV ENSP00000367743/1-249 GCYDLVTSFM ETNMGIIAGV AFGIAFSQLI GMLLACCLSR FITANQYEMV ENSTTRP00000003975/1-249 GCYDLVTSFM ETNMGIIAGV AFGIAFSQLI GMLLACCLSR FITANQYEMV