KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:55 2014 Check: 00 .. Name: ENSP00000362097/1-640 Len: 689 Check: 4530 Weight: 1.00 Name: ENSBTAP00000011820/1-683 Len: 689 Check: 5383 Weight: 1.00 Name: bmy_00091T0/1-427 Len: 689 Check: 8188 Weight: 1.00 Name: BACU017993/1-610 Len: 689 Check: 4848 Weight: 1.00 Name: ENSTTRP00000008921/1-421 Len: 689 Check: 6138 Weight: 1.00 // 1 50 ENSP00000362097/1-640 MDRCKHVGRL RLAQDHSILN PQKWCCLECA TTESVWACLK CSHVACGRYI ENSBTAP00000011820/1-683 MDRCKHVGRL RLAQDHSILN PQKWYCRECA TTESVWACLK CSHVACGRYI bmy_00091T0/1-427 MDRCKHVGRL RLAQDHSILN PQKWCCRECA TTESVWACLK CSHVACGRYI BACU017993/1-610 MDRCKHVGRL RLAQDHSILN PQKWCCRECA TTESVWACLK CSHVACGRYI ENSTTRP00000008921/1-421 MDRCKHVGRL RLAQDHSILN PQKWCCRECA TTESVWACLK CSHVACGRYI 51 100 ENSP00000362097/1-640 EDHALKHFEE TGHPLAMEVR DLYVFCYLCK DYVLNDNPEG DLKLLRSSLL ENSBTAP00000011820/1-683 EDHALKHFEE TRHPLAMEVR DLYVFCYLCK DYVLNDNPEG DLKLLRSSLL bmy_00091T0/1-427 EDHALKHFEX TGHPLAMEVR DLYVFCYLCK DYVLNDNPEG DLKLLRSSLL BACU017993/1-610 EDHALKHFEK TGHPLAMEVR DLYVFCYLCK DYVLNDNPEG DLKLLRSSLL ENSTTRP00000008921/1-421 EDHALKHFEK TGHPLAMEVR DLYVFCYLCK DYVLNDNPEG DLKLLRSSLL 101 150 ENSP00000362097/1-640 AVRGQKQDTP VRRGRTLRSM ASGEDVVLPQ RAPQGQPQML TALWYRRQRL ENSBTAP00000011820/1-683 AVRGQTQDPP LRRGRTLRSM AAGEDAVPPQ RAPQGQPQML TALWYRRQRL bmy_00091T0/1-427 AVRGQTQDPP LRRGRMLRSM ASGEDAVPPQ RAPQGQPQML TALWYRRQHL BACU017993/1-610 AVRGQTQDPP LRRGRTLRSM ASGEDAIPPQ RAPQGQPQML TALWYRRQRL ENSTTRP00000008921/1-421 AVRGQTQDLP LRRGRTLRSM ASGEDAVPPQ RAPQGQPQML TALWYRRQRL 151 200 ENSP00000362097/1-640 LARTLRLWFE KSSRGQAKLE QRRQEEALER KKEEARRRRR EVKRRLLEEL ENSBTAP00000011820/1-683 LARTLRLWFE KTSRGQAKLE QQRREEALER KKEAARQRRR EVKRRLLEEL bmy_00091T0/1-427 LARTLRLWFE KTSRGQAKLE QRRRQEALER KKEAARQRRR E--------- BACU017993/1-610 LARTLRLWFE KTSRGQAKLE QRRRQEALER KKEAARQRRR E--------- ENSTTRP00000008921/1-421 LARTLRLWFE KTSRGQAKLE QRRRQEALER KKEAA----- ---------- 201 250 ENSP00000362097/1-640 ASTPPRKSAR LLLHTPRDAG PAASRPAALP TSRRVPAATL KLRRQPAMAP ENSBTAP00000011820/1-683 ASAPPRKSAR LLLHTPRTAP LRVPAPRAPA GPRPAP---- --RRAPAMAP bmy_00091T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU017993/1-610 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008921/1-421 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000362097/1-640 GVTGLRNLGN TCYMNSILQV LSHLQKFREC FLNLDPSKTE HLFPKATNGK ENSBTAP00000011820/1-683 GVTGLRNLGN TCYMNSILQV LSHLRKFREC FLNLDPSKTE QLFPRAANGK bmy_00091T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU017993/1-610 ---------- ---------V LSHLRKFREC FLNLDPSKTE QLFPRAANGK ENSTTRP00000008921/1-421 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000362097/1-640 TQLSGKPTNS SATEL-SLRN DRAEACEREG FCWNGRASIS RSLELIQNKE ENSBTAP00000011820/1-683 APLSGRPASS SATELSSTRS DGAEACEREG LCLNGGTSLS RSLELIQNKE bmy_00091T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU017993/1-610 APLAGRPAGS SATEL-SPRS HGAEACELEG LCLNGGASLS RSLELIQNKE ENSTTRP00000008921/1-421 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000362097/1-640 PSSKHISLCR ELHTLFRVMW SGKWALVSPF AMLHSVWSLI PAFRGYDQQD ENSBTAP00000011820/1-683 PSSKHISLCH ELHTLFRVMW SGKWALVSPF AMLHSVWSLI PAFRGYDQQD bmy_00091T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU017993/1-610 PSSKHISLCH ELHTLFRVMW SGRWALVSPF AMLHSVWSLI PAFRGYDQQD ENSTTRP00000008921/1-421 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000362097/1-640 AQEFLCELLH KVQQELESEG TTRRILIPFS QRKLTKQVLK VVNTIFHGQL ENSBTAP00000011820/1-683 AQEFLCELLH KVQQELESEG TTRRILIPFS QRKLTKQVLK VVNTIFHGQL bmy_00091T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU017993/1-610 AQEFLCELLH KVQQELESEG TKRRILIPFS QRKLTKQVLK VVNTIFHGQL ENSTTRP00000008921/1-421 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000362097/1-640 LSQVTCISCN YKSNTIEPFW DLSLEFPERY HCIEKGFVPL NQTECLLTEM ENSBTAP00000011820/1-683 LSQVTCVSCN YKSNTIEPFW DLSLEFPERY HCIEKGFVPL NQTECLLTEM bmy_00091T0/1-427 ---VTCVSCN YKSNTIEPFW DLSLEFPERY HCIEKGFIPL NQTQCLLTEM BACU017993/1-610 LSQVTCVSCN YKSNTIEPFW DLSLEFPERY HCIEKGFIPL NQTQCLLTEM ENSTTRP00000008921/1-421 ---VTCVSCN YKSNTIEPFW DLSLEFPERY HCIEKGFIPL NQTQCLLTEM 501 550 ENSP00000362097/1-640 LAKFTETEAL EGRIYACDQC NSKRRKSNPK PLVLSEARKQ LMIYRLPQVL ENSBTAP00000011820/1-683 LAKFTETEAL EGRIYACDQC NSKRRKSNPK PLVLSEARKQ LMIYRLPQVL bmy_00091T0/1-427 LAKFTETEAL EGRIYACDQC NSKRRKSNPK PLVLSEARKQ LMIYRLPQVL BACU017993/1-610 LAKFTETEAL EGRIYACDQC NSKRRKSNPK PLVLSEARKQ LMIYRLPQVL ENSTTRP00000008921/1-421 LAKFTETEAL EGRIYACDQC NSKRRKSNPK PLVLSEARKQ LMIYRLPQVL 551 600 ENSP00000362097/1-640 RLHLKRFRWS GRNHREKIGV HVVFDQVLTM EPYCCRDMLS SLDKETFAYD ENSBTAP00000011820/1-683 RLHLKRFRWS GRNHREKIGV HVVFDQVLTM EPYCCRDMLS SLDKETFAYD bmy_00091T0/1-427 RLHLKRFRWS GRSHREKIGV HVVFDQVLTM EPYCCRDMLS SLDKETFAYD BACU017993/1-610 RLHLKRFRWS GRNHREKIGV HVVFDQVLTM EPYCCRDMLS SLDKETFAYD ENSTTRP00000008921/1-421 RLHLKRFRWS GRNHREKIGV HVVFDQVLTM EPYCCRDMLS SLDKETFAYD 601 650 ENSP00000362097/1-640 LSAVVMHHGK GFGSGHYTAY CYNTEGG--- --------AC AL--LCGV-- ENSBTAP00000011820/1-683 LSAVVMHHGK GFGSGHYTAY CYNTEGGFWV HCNDSKLNVC SVEEVCKTQA bmy_00091T0/1-427 LSAVVMHHGK GFGSGHYTAY CYNTEGGFWV HCNDSKLNVC SVEEVCKTQA BACU017993/1-610 LSAVVMHHGK GFGSGHYTAY CYNTEGGFWV HCNDSKLNVC SVEEVCKTQA ENSTTRP00000008921/1-421 LSAVVMHHGK GFGSGHYTAY CYNTEGGFWV HCNDSKLNVC SVEEVCKTQA 651 700 ENSP00000362097/1-640 ---------- ---------- -------GDT ERG------ ENSBTAP00000011820/1-683 YILFYTQRTV QGNARISETQ LQTQVHSSNN DEGRPRTFP bmy_00091T0/1-427 YILFYTQRTV QGNARISETQ LQTQVQSSNN DEGRPRTFP BACU017993/1-610 YILFYTQRTV QGNARISETQ LQTQVQSSNN DEGRPRTFP ENSTTRP00000008921/1-421 YILFYTQRTV QGNARISETQ LQTQVQSSNN DEGRPRTFP