KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:45:03 2014 Check: 00 ..
Name: ENSP00000266712/1-914 Len: 920 Check: 4354 Weight: 1.00
Name: ENSTTRP00000003119/1-915 Len: 920 Check: 3429 Weight: 1.00
Name: ENSBTAP00000011881/1-920 Len: 920 Check: 4311 Weight: 1.00
Name: bmy_02200T0/1-915 Len: 920 Check: 1198 Weight: 1.00
Name: BACU018736/1-915 Len: 920 Check: 1157 Weight: 1.00
//
1 50
ENSP00000266712/1-914 -----MANIN LKEITLIVGV VTACYWNSLF CGFVFDDVSA ILDNKDLHPS
ENSTTRP00000003119/1-915 -----MADIN LKEVTLIIGV VAACYWNSLF CGFVFDDVSA ILDNKDLHPS
ENSBTAP00000011881/1-920 VLMEKMADIN LKEVTLIVGV VAVCYWNSLF CGFVFDDVSA ILDNKDLHPS
bmy_02200T0/1-915 -----MADIN LKEVTLIIGV VAACYWNSLF CGFVFDDVSA ILDNKDVHPS
BACU018736/1-915 -----MADIN LKEVTLIIGV VAACYWNSLF CGFVFDDVSA ILDNKDVHPS
51 100
ENSP00000266712/1-914 TPLKTLFQND FWGTPMSEER SHKSYRPLTV LTFRLNYLLS ELKPMSYHLL
ENSTTRP00000003119/1-915 TPLKTLFQND FWGTPMSEER SHKSYRPLTV LTFRLNYLFS ELKPMSYHLL
ENSBTAP00000011881/1-920 TPLKTLFQND FWGTPMSEER SHKSYRPLTV LTFRLNYLFS ELTPMSYHLL
bmy_02200T0/1-915 TPLKTLFQND FWGTPMSEER SHKSYRPLTV LTFRLNYWFS ELKPMSYHLL
BACU018736/1-915 TPLKTLFQND FWGTPMSEER SHKSYRPLTV LTFRLNYWFS ELKPMSYHLL
101 150
ENSP00000266712/1-914 NMIFHAVVSV IFLKVCKLFL DNKSSVIASL LFAVHPIHTE AVTGVVGRAE
ENSTTRP00000003119/1-915 NMIFHAVVSV IFLKVCKLFL DNRSSVIASL LFAVHPIHTE AVTGVVGRAE
ENSBTAP00000011881/1-920 NMIFHAVVSV IFLKVCRLFL NNQSSMIASL LFAVHPIHTE AVTGVVGRAE
bmy_02200T0/1-915 NMIFHAVVSV IFLKVCKLFL DNRSSVIASL LFAVHPIHTE AVTGVVGRAE
BACU018736/1-915 NMIFHAVVSV IFLKVCKLFL DNRSSVIASL LFAVHPIHTE AVTGVVGRAE
151 200
ENSP00000266712/1-914 LLSSIFFLAA FLSYTRSKGP DNSIIWTPIA LTVFLVAVAT LCKEQGITVV
ENSTTRP00000003119/1-915 LLSSIFFLAA FLSYTKSKGP DNSIVWTPIA LTVFLVAVAT LCKEQGITVV
ENSBTAP00000011881/1-920 LLSSIFFLAA FLSYTKSKGP DNSIVWTPIA LTVFLVAVAT LCKEQGITVV
bmy_02200T0/1-915 LLSSIFFLAA FLSYTKSKGP DNSIVWTPIA LTVFLVAVAT LCKEQGITVV
BACU018736/1-915 LLSSIFFLAA FLSFTKSKGP DNSIVWTPIA LTVFLVAVAT LCKEQGITVV
201 250
ENSP00000266712/1-914 GICCVYEVFI AQGYTLPLLC TTAGQFLRGK GSIPFSMLQT LVKLIVLMFS
ENSTTRP00000003119/1-915 GICCVYEVFI AQGYTLPLLC TTAGQFLRGK GSIPFSMLQT LIKLIVLMFS
ENSBTAP00000011881/1-920 GICCVYEVFI AQGYTLPLLC TTAGQFLRGK GSIPFSMLQT LIKLIVLMFS
bmy_02200T0/1-915 GICCVYEVFI AQGYTLPLLC TTAGQFLRGK GSIPFSMLQT LIKLIALMFS
BACU018736/1-915 GICCVYEVFI AQGYTLPLLC TTAGQFLRGK GSIPFSMLQT LIKLIALMFS
251 300
ENSP00000266712/1-914 TLLLVVIRVQ VIQSQLPVFT RFDNPAAVSP TPTRQLTFNY LLPVNAWLLL
ENSTTRP00000003119/1-915 TLLLVVIRVQ VIQSQLPVFT RFDNPAAVSP TPTRQLTFNY LLPVNAWLLL
ENSBTAP00000011881/1-920 TLLLVVIRVQ VIQSQLPVFT RFDNPAAVSP TPTRQLTFNY LLPVNAWLLL
bmy_02200T0/1-915 TLLLVVIRVQ VIQSQLPVFT RFDNPAAVSP TPTRQLTFNY LLPVNAWLLL
BACU018736/1-915 TLLLVVIRVQ VIQSQLPVFT RFDNPAAVSP TPTRQLTFNY LLPVNAWLLL
301 350
ENSP00000266712/1-914 NPSELCCDWT MGTIPLIESL LDIRNLATFT FFCFLGMLGV FSIRYSGDSS
ENSTTRP00000003119/1-915 NPSELCCDWT MGTIPLIESF LDIRNLATFI FFCFLGALGV FSLRYPGNSS
ENSBTAP00000011881/1-920 NPSELCCDWT MGTIPLIESF LDVRNLATFI FFCFLGALGV FSLRYPSNSS
bmy_02200T0/1-915 NPSELCCDWT MGTIPLIESF LDIRNLATFI FFCFLGALGV FGVRYPGNSS
BACU018736/1-915 NPSELCCDWT MGTIPLIESF LDIRNLATFI FFCFLGALGV FGVRYPGNSS
351 400
ENSP00000266712/1-914 KTVLMALCLM ALPFIPASNL FFPVGFVVAE RVLYVPSMGF CILVAHGWQK
ENSTTRP00000003119/1-915 KTVLMALCLM ALPFIPASNL FFPVGFVVAE RVLYVPSMGF CILVAHGWQK
ENSBTAP00000011881/1-920 KTVLMALCLM ALPFIPASNL FFPVGFVVAE RVLYVPSMGF CILVAHGWQK
bmy_02200T0/1-915 KTVLMALCLM ALPFIPASNL FFPVGFVVAE RVLYVPSMGF CILVAHGWQK
BACU018736/1-915 KTVLMALCLM ALPFIPASNL FFPVGFVVAE RVLYVPSMGF CILVAHGWQK
401 450
ENSP00000266712/1-914 ISTKSVFKKL SWICLSMVIL THSLKTFHRN WDWESEYTLF MSALKVNKNN
ENSTTRP00000003119/1-915 ISNKSVLKKL SWVCLSMVIL THALKTLHRN WDWESEYTLF MSALKXXXXX
ENSBTAP00000011881/1-920 ISNKSVFKKL SWVCLSLVIF THALKTLHRN WDWESEYTLF MSALKVNKNN
bmy_02200T0/1-915 ISNKSVLKKL SWVCLSMVIL THALKTLHRN WDWESEYTLF MSALKVNKNN
BACU018736/1-915 ISNKSVLKKL SWVCLSMVIL THALKTLHRN WDWESEYTLF MSALKVNKNN
451 500
ENSP00000266712/1-914 AKLWNNVGHA LENEKNFERA LKYFLQATHV QPDDIGAHMN VGRTYKNLNR
ENSTTRP00000003119/1-915 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXDIGAHMN VGRTYKNLNR
ENSBTAP00000011881/1-920 AKLWNNVGHA LENEKNFERA LKYFLQATHV QPDDIGAHMN VGRTYKNLNR
bmy_02200T0/1-915 AKLWNNVGHA LENEKNFERA LKYFLQATHV QPDDIGAHMN VGRTYKNLNR
BACU018736/1-915 AKLWNNVGHA LENEKNFERA LKYFLQATHV QPDDIGAHMN VGRTYKNLNR
501 550
ENSP00000266712/1-914 TKEAEESYMM AKSLMPQIIP GKKYAARIAP NHLNVYINLA NLIRANESRL
ENSTTRP00000003119/1-915 TKAAEESYMT AKSLMPQIIP GKKYAARIAP NHLNVYINLA NLIRANESRL
ENSBTAP00000011881/1-920 TKEAEESYMT AKSLMPQIIP GKKYAARIAP NHLNVYINLA NLIRANESRL
bmy_02200T0/1-915 TKAAEESYMT AKSLMPQIIP GKKYAARIAP NHLNVYINLA NLIRANESRL
BACU018736/1-915 TKAAEESYMT AKSLMPQVIP GKKYAARIAP NHLNVYINLA NLIRANESRL
551 600
ENSP00000266712/1-914 EEADQLYRQA ISMRPDFKQA YISRGELLLK MNKPLKAKEA YLKALELDRN
ENSTTRP00000003119/1-915 EEADQLYRQA ISMRPDFKQA YISRGELLLK MNKPVKAKEA YLKALELDKN
ENSBTAP00000011881/1-920 EEADQLYRQA ISMRPDFKQA YISRGELLLK MNKPAKAKEA YLKALELDRN
bmy_02200T0/1-915 EEADQLYRQA ISMRPDFKQA YISRGELLLK MNKPVKAKEA YLKALELDKN
BACU018736/1-915 EEADQLYRQA ISMRPDFKQA YISRGELLLK MNKPVKAKEA YLKALELDKN
601 650
ENSP00000266712/1-914 NADLWYNLAI VHIELKEPNE ALKNFNRALE LNPKHKLALF NSAIVMQESG
ENSTTRP00000003119/1-915 NADLWYNLAI VHIELKEPNE ALKNFNHALE LNPKHKLALF NSAILMQESG
ENSBTAP00000011881/1-920 NADLWYNLAI VHIELKEPND ALKNFNHALE LNPKHKLALF NSAILMQESG
bmy_02200T0/1-915 NADLWYNLAI VHIELKEPNE ALKNFNHALE LNPKHKLALF NSAILMQESG
BACU018736/1-915 NADLWYNLAI VHIELKEPNE ALKNFNHALE LNPKHKLALF NSAILMQESG
651 700
ENSP00000266712/1-914 EVKLRPEARK RLLSYINEEP LDANGYFNLG MLAMDDKKDN EAEIWMKKAI
ENSTTRP00000003119/1-915 EVKLRPEARK RLLSYVNEEP LDANGYFNLG MLAMDDKKDT EAEMWMKKAI
ENSBTAP00000011881/1-920 EVRLRPEARK RLLSYINEEP QDANGYFNLG MLAMDDKKDS EAEMWMKKAI
bmy_02200T0/1-915 EVKLRPEARK RLLSYVNEEP LDANGYFNLG MLAMDDKKDT EAEMWMKKAI
BACU018736/1-915 EVKLRPEARK RLLSYVNEEP LDANGYFNLG MLAMDDKKDT EAEMWMKKAI
701 750
ENSP00000266712/1-914 KLQADFRSAL FNLALLYSQT AKELKALPIL EELLRYYPDH IKGLILKGDI
ENSTTRP00000003119/1-915 KLQADFRSAL FNLALLYSQT AKELMALPIL EELLRYYPDH IKGLILKGDI
ENSBTAP00000011881/1-920 KLQADFRSAL FNLALLYSQT AKELMALPVL EELLKYYPDH IKGLILKGDI
bmy_02200T0/1-915 KLQADFRSAL FNLALLYSQT AKELMALPIL EELLRYHPDH IKGLILKGDI
BACU018736/1-915 KLQADFRSAL FNLALLYSQT AKELMALPIL EELLRYHPDH IKGLILKGDI
751 800
ENSP00000266712/1-914 LMNQKKDILG AKKCFERILE MDPSNVQGKH NLCVVYFEEK DLLKAERCLL
ENSTTRP00000003119/1-915 LMNQKKDILG AKKCFEKILE MDPSNVQGKH NLCVVYFEEK DLLKAERCLV
ENSBTAP00000011881/1-920 LMNQKKDIRG AKKCFEKILE MDPSNVQGKH NLCVVYFEEK DLLKAERCLV
bmy_02200T0/1-915 LMNQKKDILG AKKCFEKILE MDPSNVQGKH NLCVVYFEEK DLLKAERCLV
BACU018736/1-915 LMNQKKDILG AKKCFEKILE MDPSNVQGKH NLCVVYFEEK DLLKTERCLV
801 850
ENSP00000266712/1-914 ETLALAPHEE YIQRHLNIVR DKISSSSFIE -PIFPTSKIS SVEGKKIPTE
ENSTTRP00000003119/1-915 ETLALAPHEE YIQRHLNIVR DKISSSSFVE QPVFPAGKTS DIEGDKIPTE
ENSBTAP00000011881/1-920 ETLALAPHEE YIQRHLNIVR DKISSSSFVE QPIFPAGKTS GVEGDKIPTE
bmy_02200T0/1-915 ETLALAPHEE YIQRHLNIVR DKISSSSFVE QPVFPAGKTS GIEGDKIPTE
BACU018736/1-915 ETLALAPHEE YIQRHLSIVR DKISSSSFVE QPVFPAGKTS GIEGDKIPTE
851 900
ENSP00000266712/1-914 SVKEIRGESR QTQIVKTSDN KSQSKSNKQL GKNGDEETPH KTTKDIKEIE
ENSTTRP00000003119/1-915 NEKEIKSKPR PIQIIKTSDN KSQSKSNKQL GKNTDKETPH KTTKEIKEIE
ENSBTAP00000011881/1-920 NVKEIKSEPR PTQIIKTNDN KSQSKASKQL GKNTDKEIPH KTTKEIKEIE
bmy_02200T0/1-915 NEKEIKSKPR PTQIIKTSNN KSQSKSNKQL GKNTDKETPH KTTKEIKEIE
BACU018736/1-915 NEKEIKSKPR PTQIIKTSDN KSQLKSNKQL GKNTDKETPH KTTKEIKEIE
901 950
ENSP00000266712/1-914 KKRVAALKRL EEIERILNGE
ENSTTRP00000003119/1-915 KKRVAALKRL EEIERILNGE
ENSBTAP00000011881/1-920 KKRVAALKRL EEIERILNGE
bmy_02200T0/1-915 KKRVAALKRL EEIERILNGE
BACU018736/1-915 KKRVAALKRL EEIERILNGE