KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:03 2014 Check: 00 .. Name: ENSP00000266712/1-914 Len: 920 Check: 4354 Weight: 1.00 Name: ENSTTRP00000003119/1-915 Len: 920 Check: 3429 Weight: 1.00 Name: ENSBTAP00000011881/1-920 Len: 920 Check: 4311 Weight: 1.00 Name: bmy_02200T0/1-915 Len: 920 Check: 1198 Weight: 1.00 Name: BACU018736/1-915 Len: 920 Check: 1157 Weight: 1.00 // 1 50 ENSP00000266712/1-914 -----MANIN LKEITLIVGV VTACYWNSLF CGFVFDDVSA ILDNKDLHPS ENSTTRP00000003119/1-915 -----MADIN LKEVTLIIGV VAACYWNSLF CGFVFDDVSA ILDNKDLHPS ENSBTAP00000011881/1-920 VLMEKMADIN LKEVTLIVGV VAVCYWNSLF CGFVFDDVSA ILDNKDLHPS bmy_02200T0/1-915 -----MADIN LKEVTLIIGV VAACYWNSLF CGFVFDDVSA ILDNKDVHPS BACU018736/1-915 -----MADIN LKEVTLIIGV VAACYWNSLF CGFVFDDVSA ILDNKDVHPS 51 100 ENSP00000266712/1-914 TPLKTLFQND FWGTPMSEER SHKSYRPLTV LTFRLNYLLS ELKPMSYHLL ENSTTRP00000003119/1-915 TPLKTLFQND FWGTPMSEER SHKSYRPLTV LTFRLNYLFS ELKPMSYHLL ENSBTAP00000011881/1-920 TPLKTLFQND FWGTPMSEER SHKSYRPLTV LTFRLNYLFS ELTPMSYHLL bmy_02200T0/1-915 TPLKTLFQND FWGTPMSEER SHKSYRPLTV LTFRLNYWFS ELKPMSYHLL BACU018736/1-915 TPLKTLFQND FWGTPMSEER SHKSYRPLTV LTFRLNYWFS ELKPMSYHLL 101 150 ENSP00000266712/1-914 NMIFHAVVSV IFLKVCKLFL DNKSSVIASL LFAVHPIHTE AVTGVVGRAE ENSTTRP00000003119/1-915 NMIFHAVVSV IFLKVCKLFL DNRSSVIASL LFAVHPIHTE AVTGVVGRAE ENSBTAP00000011881/1-920 NMIFHAVVSV IFLKVCRLFL NNQSSMIASL LFAVHPIHTE AVTGVVGRAE bmy_02200T0/1-915 NMIFHAVVSV IFLKVCKLFL DNRSSVIASL LFAVHPIHTE AVTGVVGRAE BACU018736/1-915 NMIFHAVVSV IFLKVCKLFL DNRSSVIASL LFAVHPIHTE AVTGVVGRAE 151 200 ENSP00000266712/1-914 LLSSIFFLAA FLSYTRSKGP DNSIIWTPIA LTVFLVAVAT LCKEQGITVV ENSTTRP00000003119/1-915 LLSSIFFLAA FLSYTKSKGP DNSIVWTPIA LTVFLVAVAT LCKEQGITVV ENSBTAP00000011881/1-920 LLSSIFFLAA FLSYTKSKGP DNSIVWTPIA LTVFLVAVAT LCKEQGITVV bmy_02200T0/1-915 LLSSIFFLAA FLSYTKSKGP DNSIVWTPIA LTVFLVAVAT LCKEQGITVV BACU018736/1-915 LLSSIFFLAA FLSFTKSKGP DNSIVWTPIA LTVFLVAVAT LCKEQGITVV 201 250 ENSP00000266712/1-914 GICCVYEVFI AQGYTLPLLC TTAGQFLRGK GSIPFSMLQT LVKLIVLMFS ENSTTRP00000003119/1-915 GICCVYEVFI AQGYTLPLLC TTAGQFLRGK GSIPFSMLQT LIKLIVLMFS ENSBTAP00000011881/1-920 GICCVYEVFI AQGYTLPLLC TTAGQFLRGK GSIPFSMLQT LIKLIVLMFS bmy_02200T0/1-915 GICCVYEVFI AQGYTLPLLC TTAGQFLRGK GSIPFSMLQT LIKLIALMFS BACU018736/1-915 GICCVYEVFI AQGYTLPLLC TTAGQFLRGK GSIPFSMLQT LIKLIALMFS 251 300 ENSP00000266712/1-914 TLLLVVIRVQ VIQSQLPVFT RFDNPAAVSP TPTRQLTFNY LLPVNAWLLL ENSTTRP00000003119/1-915 TLLLVVIRVQ VIQSQLPVFT RFDNPAAVSP TPTRQLTFNY LLPVNAWLLL ENSBTAP00000011881/1-920 TLLLVVIRVQ VIQSQLPVFT RFDNPAAVSP TPTRQLTFNY LLPVNAWLLL bmy_02200T0/1-915 TLLLVVIRVQ VIQSQLPVFT RFDNPAAVSP TPTRQLTFNY LLPVNAWLLL BACU018736/1-915 TLLLVVIRVQ VIQSQLPVFT RFDNPAAVSP TPTRQLTFNY LLPVNAWLLL 301 350 ENSP00000266712/1-914 NPSELCCDWT MGTIPLIESL LDIRNLATFT FFCFLGMLGV FSIRYSGDSS ENSTTRP00000003119/1-915 NPSELCCDWT MGTIPLIESF LDIRNLATFI FFCFLGALGV FSLRYPGNSS ENSBTAP00000011881/1-920 NPSELCCDWT MGTIPLIESF LDVRNLATFI FFCFLGALGV FSLRYPSNSS bmy_02200T0/1-915 NPSELCCDWT MGTIPLIESF LDIRNLATFI FFCFLGALGV FGVRYPGNSS BACU018736/1-915 NPSELCCDWT MGTIPLIESF LDIRNLATFI FFCFLGALGV FGVRYPGNSS 351 400 ENSP00000266712/1-914 KTVLMALCLM ALPFIPASNL FFPVGFVVAE RVLYVPSMGF CILVAHGWQK ENSTTRP00000003119/1-915 KTVLMALCLM ALPFIPASNL FFPVGFVVAE RVLYVPSMGF CILVAHGWQK ENSBTAP00000011881/1-920 KTVLMALCLM ALPFIPASNL FFPVGFVVAE RVLYVPSMGF CILVAHGWQK bmy_02200T0/1-915 KTVLMALCLM ALPFIPASNL FFPVGFVVAE RVLYVPSMGF CILVAHGWQK BACU018736/1-915 KTVLMALCLM ALPFIPASNL FFPVGFVVAE RVLYVPSMGF CILVAHGWQK 401 450 ENSP00000266712/1-914 ISTKSVFKKL SWICLSMVIL THSLKTFHRN WDWESEYTLF MSALKVNKNN ENSTTRP00000003119/1-915 ISNKSVLKKL SWVCLSMVIL THALKTLHRN WDWESEYTLF MSALKXXXXX ENSBTAP00000011881/1-920 ISNKSVFKKL SWVCLSLVIF THALKTLHRN WDWESEYTLF MSALKVNKNN bmy_02200T0/1-915 ISNKSVLKKL SWVCLSMVIL THALKTLHRN WDWESEYTLF MSALKVNKNN BACU018736/1-915 ISNKSVLKKL SWVCLSMVIL THALKTLHRN WDWESEYTLF MSALKVNKNN 451 500 ENSP00000266712/1-914 AKLWNNVGHA LENEKNFERA LKYFLQATHV QPDDIGAHMN VGRTYKNLNR ENSTTRP00000003119/1-915 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXDIGAHMN VGRTYKNLNR ENSBTAP00000011881/1-920 AKLWNNVGHA LENEKNFERA LKYFLQATHV QPDDIGAHMN VGRTYKNLNR bmy_02200T0/1-915 AKLWNNVGHA LENEKNFERA LKYFLQATHV QPDDIGAHMN VGRTYKNLNR BACU018736/1-915 AKLWNNVGHA LENEKNFERA LKYFLQATHV QPDDIGAHMN VGRTYKNLNR 501 550 ENSP00000266712/1-914 TKEAEESYMM AKSLMPQIIP GKKYAARIAP NHLNVYINLA NLIRANESRL ENSTTRP00000003119/1-915 TKAAEESYMT AKSLMPQIIP GKKYAARIAP NHLNVYINLA NLIRANESRL ENSBTAP00000011881/1-920 TKEAEESYMT AKSLMPQIIP GKKYAARIAP NHLNVYINLA NLIRANESRL bmy_02200T0/1-915 TKAAEESYMT AKSLMPQIIP GKKYAARIAP NHLNVYINLA NLIRANESRL BACU018736/1-915 TKAAEESYMT AKSLMPQVIP GKKYAARIAP NHLNVYINLA NLIRANESRL 551 600 ENSP00000266712/1-914 EEADQLYRQA ISMRPDFKQA YISRGELLLK MNKPLKAKEA YLKALELDRN ENSTTRP00000003119/1-915 EEADQLYRQA ISMRPDFKQA YISRGELLLK MNKPVKAKEA YLKALELDKN ENSBTAP00000011881/1-920 EEADQLYRQA ISMRPDFKQA YISRGELLLK MNKPAKAKEA YLKALELDRN bmy_02200T0/1-915 EEADQLYRQA ISMRPDFKQA YISRGELLLK MNKPVKAKEA YLKALELDKN BACU018736/1-915 EEADQLYRQA ISMRPDFKQA YISRGELLLK MNKPVKAKEA YLKALELDKN 601 650 ENSP00000266712/1-914 NADLWYNLAI VHIELKEPNE ALKNFNRALE LNPKHKLALF NSAIVMQESG ENSTTRP00000003119/1-915 NADLWYNLAI VHIELKEPNE ALKNFNHALE LNPKHKLALF NSAILMQESG ENSBTAP00000011881/1-920 NADLWYNLAI VHIELKEPND ALKNFNHALE LNPKHKLALF NSAILMQESG bmy_02200T0/1-915 NADLWYNLAI VHIELKEPNE ALKNFNHALE LNPKHKLALF NSAILMQESG BACU018736/1-915 NADLWYNLAI VHIELKEPNE ALKNFNHALE LNPKHKLALF NSAILMQESG 651 700 ENSP00000266712/1-914 EVKLRPEARK RLLSYINEEP LDANGYFNLG MLAMDDKKDN EAEIWMKKAI ENSTTRP00000003119/1-915 EVKLRPEARK RLLSYVNEEP LDANGYFNLG MLAMDDKKDT EAEMWMKKAI ENSBTAP00000011881/1-920 EVRLRPEARK RLLSYINEEP QDANGYFNLG MLAMDDKKDS EAEMWMKKAI bmy_02200T0/1-915 EVKLRPEARK RLLSYVNEEP LDANGYFNLG MLAMDDKKDT EAEMWMKKAI BACU018736/1-915 EVKLRPEARK RLLSYVNEEP LDANGYFNLG MLAMDDKKDT EAEMWMKKAI 701 750 ENSP00000266712/1-914 KLQADFRSAL FNLALLYSQT AKELKALPIL EELLRYYPDH IKGLILKGDI ENSTTRP00000003119/1-915 KLQADFRSAL FNLALLYSQT AKELMALPIL EELLRYYPDH IKGLILKGDI ENSBTAP00000011881/1-920 KLQADFRSAL FNLALLYSQT AKELMALPVL EELLKYYPDH IKGLILKGDI bmy_02200T0/1-915 KLQADFRSAL FNLALLYSQT AKELMALPIL EELLRYHPDH IKGLILKGDI BACU018736/1-915 KLQADFRSAL FNLALLYSQT AKELMALPIL EELLRYHPDH IKGLILKGDI 751 800 ENSP00000266712/1-914 LMNQKKDILG AKKCFERILE MDPSNVQGKH NLCVVYFEEK DLLKAERCLL ENSTTRP00000003119/1-915 LMNQKKDILG AKKCFEKILE MDPSNVQGKH NLCVVYFEEK DLLKAERCLV ENSBTAP00000011881/1-920 LMNQKKDIRG AKKCFEKILE MDPSNVQGKH NLCVVYFEEK DLLKAERCLV bmy_02200T0/1-915 LMNQKKDILG AKKCFEKILE MDPSNVQGKH NLCVVYFEEK DLLKAERCLV BACU018736/1-915 LMNQKKDILG AKKCFEKILE MDPSNVQGKH NLCVVYFEEK DLLKTERCLV 801 850 ENSP00000266712/1-914 ETLALAPHEE YIQRHLNIVR DKISSSSFIE -PIFPTSKIS SVEGKKIPTE ENSTTRP00000003119/1-915 ETLALAPHEE YIQRHLNIVR DKISSSSFVE QPVFPAGKTS DIEGDKIPTE ENSBTAP00000011881/1-920 ETLALAPHEE YIQRHLNIVR DKISSSSFVE QPIFPAGKTS GVEGDKIPTE bmy_02200T0/1-915 ETLALAPHEE YIQRHLNIVR DKISSSSFVE QPVFPAGKTS GIEGDKIPTE BACU018736/1-915 ETLALAPHEE YIQRHLSIVR DKISSSSFVE QPVFPAGKTS GIEGDKIPTE 851 900 ENSP00000266712/1-914 SVKEIRGESR QTQIVKTSDN KSQSKSNKQL GKNGDEETPH KTTKDIKEIE ENSTTRP00000003119/1-915 NEKEIKSKPR PIQIIKTSDN KSQSKSNKQL GKNTDKETPH KTTKEIKEIE ENSBTAP00000011881/1-920 NVKEIKSEPR PTQIIKTNDN KSQSKASKQL GKNTDKEIPH KTTKEIKEIE bmy_02200T0/1-915 NEKEIKSKPR PTQIIKTSNN KSQSKSNKQL GKNTDKETPH KTTKEIKEIE BACU018736/1-915 NEKEIKSKPR PTQIIKTSDN KSQLKSNKQL GKNTDKETPH KTTKEIKEIE 901 950 ENSP00000266712/1-914 KKRVAALKRL EEIERILNGE ENSTTRP00000003119/1-915 KKRVAALKRL EEIERILNGE ENSBTAP00000011881/1-920 KKRVAALKRL EEIERILNGE bmy_02200T0/1-915 KKRVAALKRL EEIERILNGE BACU018736/1-915 KKRVAALKRL EEIERILNGE