KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:04 2014 Check: 00 .. Name: BACU008486/1-999 Len: 999 Check: 8974 Weight: 1.00 Name: ENSBTAP00000011882/1-648 Len: 999 Check: 5756 Weight: 1.00 Name: ENSP00000218176/1-647 Len: 999 Check: 1217 Weight: 1.00 Name: ENSTTRP00000012947/1-645 Len: 999 Check: 611 Weight: 1.00 Name: bmy_16639T0/1-648 Len: 999 Check: 4878 Weight: 1.00 // 1 50 BACU008486/1-999 MAAGVATWLP FARAAAVGWL PLAQQPLPPA PGVKASRGDE VLVVNVSGRR ENSBTAP00000011882/1-648 MAAGVATWLP FARAAAVGWL PLAQQPLPPA PGVKASRGDE VLVVNVSGRR ENSP00000218176/1-647 MAAGLATWLP FARAAAVGWL PLAQQPLPPA PGVKASRGDE VLVVNVSGRR ENSTTRP00000012947/1-645 MAAGVATWLP FARAAAVGWL PLAQQPLPPA PGVKATRGDE VLVVNVSGRR bmy_16639T0/1-648 MAAGVATWLP FARAAAVGWL PLAQQPLPPA PGVKASRGDE VLVVNVSGRR 51 100 BACU008486/1-999 FETWKNTLDR YPDTLLGSSE KEFFYDADSG EYFFDRDPDM FRHVLNFYRT ENSBTAP00000011882/1-648 FETWKNTLDR YPDTLLGSSE KEFFYNADSG EYFFDRDPDM FRHVLNFYRT ENSP00000218176/1-647 FETWKNTLDR YPDTLLGSSE KEFFYDADSG EYFFDRDPDM FRHVLNFYRT ENSTTRP00000012947/1-645 FETWKNTLDR YPDTLLGSSE KEFFYDADSG EYFFDRDPDM FRHVLNFYRT bmy_16639T0/1-648 FETWKNTLDR YPDTLLGSSE KEFFYDADSG EYFFDRDPDM FRHVLNFYRT 101 150 BACU008486/1-999 GRLHCPRQEC IQAFDEELAF YGLVPELVGD CCLEEYRDRK KENAERLAED ENSBTAP00000011882/1-648 GRLHCPRQEC IQAFDEELAF YGLVPELVGD CCLEEYRDRK KENAERLAED ENSP00000218176/1-647 GRLHCPRQEC IQAFDEELAF YGLVPELVGD CCLEEYRDRK KENAERLAED ENSTTRP00000012947/1-645 GRLHCPRQEC IQAFDEELAF YGLVPELVGD CCLEEYRDRK KENAERLAED bmy_16639T0/1-648 GRLHCPRQEC IQAFDEELAF YGLVPELVGD CCLEEYRDRK KENAERLAED 151 200 BACU008486/1-999 EEAEQAGDGP SLPAGSSLRQ RLWRAFENPH TSTAALVFYY VTGFFIAVSV ENSBTAP00000011882/1-648 EEAEQAGDGP TLPAGSSLRQ RLWRAFENPH TSTAALVFYY VTGFFIAVSV ENSP00000218176/1-647 EEAEQAGDGP ALPAGSSLRQ RLWRAFENPH TSTAALVFYY VTGFFIAVSV ENSTTRP00000012947/1-645 EEAEQAGDGP SLPAGSSLRQ QLWRAFENPH TSTAALVFYY VTGFFIAVSV bmy_16639T0/1-648 EEAEQAGDGP SLPAGSSLRQ RLWRAFENPH TSTAALVFYY VTGFFIAVSV 201 250 BACU008486/1-999 IANVVETIPC RGPARRPPRE QPCGERFPLA FFCMDTACVL IFTGEYLLRL ENSBTAP00000011882/1-648 IANVVETIPC RSPTRRPPRE QPCGDRFPLA FFCMDTACVL IFTGEYLLRL ENSP00000218176/1-647 IANVVETIPC RGSARRSSRE QPCGERFPQA FFCMDTACVL IFTGEYLLRL ENSTTRP00000012947/1-645 IANVVETIPC RGPARRPPRE QPCGERFPLA FFCMDTACVL IFTGEYLLRL bmy_16639T0/1-648 IANVVETIPC RGPARRPPRE QPCGERFPVA FFCMDTACVL IFTGEYLLRL 251 300 BACU008486/1-999 FAAPSRCRFL RSVMSLIDVV AILPYYIGLL VPKNEDVSGA FVTLRVFRVF ENSBTAP00000011882/1-648 FAAPSRCRFL RSVMSLIDVV AILPYYIGLF MPKNEDVSGA FVTLRVFRVF ENSP00000218176/1-647 FAAPSRCRFL RSVMSLIDVV AILPYYIGLL VPKNDDVSGA FVTLRVFRVF ENSTTRP00000012947/1-645 FAAPSRCRFL RSVMSLIDVV AILPYYIGLL VPKNEDVSGA FVTLRVFRVF bmy_16639T0/1-648 FAAPSRCRFL RSVMSLIDVV AILPYYIGLL VPKNEDVSGA FVTLRVFRVF 301 350 BACU008486/1-999 RIFKFSRHSQ GLRILGYTLK SCASELGFLL FSLTMAIIIF ATVMFYAEKG ENSBTAP00000011882/1-648 RIFKFSRHSQ GLRILGYTLK SCASELGFLL FSLTMAIIIF ATVMFYAEKG ENSP00000218176/1-647 RIFKFSRHSQ GLRILGYTLK SCASELGFLL FSLTMAIIIF ATVMFYAEKG ENSTTRP00000012947/1-645 RIFKFSRHSQ GLRILGYTLK SCASELGFLL FSLTMAIIIF ATVMFYAEKG bmy_16639T0/1-648 RIFKFSRHSQ GLRILGYTLK SCASELGFLL FSLTMAIIIF ATVMFYAEKG 351 400 BACU008486/1-999 TNKTNFTSIP AAFWYTIVTM TTLGYGDMVP STIAGKIFGS ICSLSGVLVI ENSBTAP00000011882/1-648 TNKTNFTSIP AAFWYTIVTM TTLGYGDMVP STIAGKIFGS ICSLSGVLVI ENSP00000218176/1-647 TNKTNFTSIP AAFWYTIVTM TTLGYGDMVP STIAGKIFGS ICSLSGVLVI ENSTTRP00000012947/1-645 TNKTNFTSIP AAFWYTIVTM TTLGYGDMVP STIAGKIFGS ICSLSGVLVI bmy_16639T0/1-648 TNKTNFTSIP AAFWYTIVTM TTLGYGDMVP STIAGKIFGS ICSLSGVLVI 401 450 BACU008486/1-999 ALPVPVIVSN FSRIYHQNQR ADKRRAQQKV RLARIRLAKS GTTNAFLQYK ENSBTAP00000011882/1-648 ALPVPVIVSN FSRIYHQNQR ADKRRAQQKV RLARIRLAKS GTTNAFLQYK ENSP00000218176/1-647 ALPVPVIVSN FSRIYHQNQR ADKRRAQQKV RLARIRLAKS GTTNAFLQYK ENSTTRP00000012947/1-645 ALPVPVIVSN FSRIYHQNQR ADKRRAQQKV RLARIRLAKS GTTNAFLQYK bmy_16639T0/1-648 ALPVPVIVSN FSRIYHQNQR ADKRRAQQKV RLARIRLAKS GTTNAFLXYK 451 500 BACU008486/1-999 QNGGLEDSSS GEEQALCVRN RSAFEQQHHH LLHCLEKTTC HEFTDELTFS ENSBTAP00000011882/1-648 QNGSLEDSGG GEEQALCVRN RSAFEQQHHH LLHCLEKTTC HEFTDELTFS ENSP00000218176/1-647 QNGGLEDSGS GEEQALCVRN RSAFEQQHHH LLHCLEKTTC HEFTDELTFS ENSTTRP00000012947/1-645 QNGGLEDSSS GEEQAPCVRN RSAFEQQHHH LLHCLEKTTC HEFTDELTFS bmy_16639T0/1-648 QNGGLEDSSS GEEQALCVRN RSAFEQQHHH LLHCLEKTTC HEFTDELTFS 501 550 BACU008486/1-999 EALGAVSLGG RTSRSTSVSS QPVGPGSLLS SCCPRRAKRH AIRLANSTAS ENSBTAP00000011882/1-648 EALGAVSLGS RTSRSTSVSS QPVGAGSLLS SCCPRRAKRR AIRLANSTAS ENSP00000218176/1-647 EALGAVSPGG RTSRSTSVSS QPVGPGSLLS SCCPRRAKRR AIRLANSTAS ENSTTRP00000012947/1-645 EALGAVSLGG RTSRSTSVSS QPVGPGSLLS SCCPRRAKRR AIRLANT--S bmy_16639T0/1-648 EALGAVSLGG RTSRSTSVSS QPVGPGSLLS SCCPRRAKRR AIRLANSTAS 551 600 BACU008486/1-999 VSRGSMQELD TLAGLRRSPA PQSRSSLNAK PHDSLDLNCD SRDFVAAIIT ENSBTAP00000011882/1-648 VSRGSMQELD TLAGLRRSPA PQSRSSLNAK PHDSLDLTCD SRDFVAAIIS ENSP00000218176/1-647 VSRGSMQELD MLAGLRRSHA PQSRSSLNAK PHDSLDLNCD SRDFVAAIIS ENSTTRP00000012947/1-645 VSHGSMQELD TLAGLQRS-A PQSRSSLNAK PHDSLDLNCD SRDFVAAIIS bmy_16639T0/1-648 VSRGSMQELD TLAGLRRSPA PQSRSSLNAK PHDSLDLNCD SRDFVAAIIS 601 650 BACU008486/1-999 LHPFSSRNFT NLIARRWLLT ELVYKLCSIQ QEHWFEKALR DKKGFIIKQM ENSBTAP00000011882/1-648 I--------- ---------- ---------- ---------- ---------- ENSP00000218176/1-647 I--------- ---------- ---------- ---------- ---------- ENSTTRP00000012947/1-645 I--------- ---------- ---------- ---------- ---------- bmy_16639T0/1-648 I--------- ---------- ---------- ---------- ---------- 651 700 BACU008486/1-999 KEDGACLFRA VADQVYGDQD MHEVVRKHCM DYLMKNADYF SNYVTEDFTT ENSBTAP00000011882/1-648 ---------- ---------- ---------- ---------- ---------- ENSP00000218176/1-647 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012947/1-645 ---------- ---------- ---------- ---------- ---------- bmy_16639T0/1-648 ---------- ---------- ---------- ---------- ---------- 701 750 BACU008486/1-999 YINRKRKNNC HGNHIEMQAM AEMYNRPVEV YQYSTEPINT FHGIHQNEDE ENSBTAP00000011882/1-648 ---------- ---------- ---------- ---PTPPANT ---------- ENSP00000218176/1-647 ---------- ---------- ---------- ---PTPPANT ---------- ENSTTRP00000012947/1-645 ---------- ---------- ---------- ---PTPPANT ---------- bmy_16639T0/1-648 ---------- ---------- ---------- ---PTPPANT ---------- 751 800 BACU008486/1-999 PIRVSYHRNI HYNSVVNPNK ATIGVGLGLP SFKPGFAEQS LMKNAIKTSE ENSBTAP00000011882/1-648 ---------- -------PDE SQ-------- ---------- ---------- ENSP00000218176/1-647 ---------- -------PDE SQ-------- ---------- ---------- ENSTTRP00000012947/1-645 ---------- -------PDE SQ-------- ---------- ---------- bmy_16639T0/1-648 ---------- -------PDE SQ-------- ---------- ---------- 801 850 BACU008486/1-999 ESWIEQQMLE DKKRATDWEA TNEAIEEQVA RESYLQWLRD QEKQARQVRG ENSBTAP00000011882/1-648 ---------- ---------- ---------- ---------- ---------- ENSP00000218176/1-647 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012947/1-645 ---------- ---------- ---------- ---------- ---------- bmy_16639T0/1-648 ---------- ---------- ---------- ---------- ---------- 851 900 BACU008486/1-999 PSQPRKASAT CSSATAAASS GLEEWTSRSP RQRSSASSPE HPELHAELGI ENSBTAP00000011882/1-648 PSSPGGGGGG ASSTLRNSSL G--------- ---------- ---------- ENSP00000218176/1-647 PSSPGGGGR- AGSTLRNSSL G--------- ---------- ---------- ENSTTRP00000012947/1-645 PSSPGGGGSG ASSTLRNSSL G--------- ---------- ---------- bmy_16639T0/1-648 PSSPGGGGSG ASSTLRNSSL G--------- ---------- ---------- 901 950 BACU008486/1-999 KPPSPGTVLA LAKPPSPCAP GTSSQFSTGA DRATSPLVSL YPALECRALI ENSBTAP00000011882/1-648 ---------- -----TPC-- ---------- ---------L LP-------- ENSP00000218176/1-647 ---------- -----TPC-- ---------- ---------L FP-------- ENSTTRP00000012947/1-645 ---------- -----TPC-- ---------- ---------L LP-------- bmy_16639T0/1-648 ---------- -----TPC-- ---------- ---------L LP-------- 951 1000 BACU008486/1-999 QQMSPSAFAG LNDWDDDEIL ASVLAVSQQE YLDSMKKNKV HRDPPPDKS ENSBTAP00000011882/1-648 ---------- ---------- ---------- --ETVKISSL --------- ENSP00000218176/1-647 ---------- ---------- ---------- --ETVKISSL --------- ENSTTRP00000012947/1-645 ---------- ---------- ---------- --ETVKISSL --------- bmy_16639T0/1-648 ---------- ---------- ---------- --ETVKISSL ---------