KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:14 2014 Check: 00 .. Name: ENSBTAP00000011919/1-457 Len: 468 Check: 9926 Weight: 1.00 Name: bmy_00783T0/1-415 Len: 468 Check: 6533 Weight: 1.00 Name: ENSP00000378650/1-436 Len: 468 Check: 9954 Weight: 1.00 Name: BACU011909/1-436 Len: 468 Check: 972 Weight: 1.00 Name: ENSTTRP00000005221/1-435 Len: 468 Check: 7715 Weight: 1.00 // 1 50 ENSBTAP00000011919/1-457 MYHPRELYPS LGTGYRLGPP QPGADSSFPP ALAEGYRYPD LDTPKLDCFL bmy_00783T0/1-415 MYHPRELYPS LGTGYRLGPP QPGADSSFPP ALAEGYRYPD LDTPKLDCFL ENSP00000378650/1-436 MYHPRELYPS LGAGYRLGPA QPGADSSFPP ALAEGYRYPE LDTPKLDCFL BACU011909/1-436 MYHPRELYPS LGTGYRLGPP QPGADSSFPP ALAEGYRYPD LDTPKLDCFL ENSTTRP00000005221/1-435 MYHPRELYPS LGTGYRLGAP QPGADSSFPP ALAEGYRYPD LDAPKLDCFL 51 100 ENSBTAP00000011919/1-457 SGIEAAPRTL AAPPPLPPLP PALGTEPSPP SAPEGLHSLP GVSLSLENRE bmy_00783T0/1-415 SGIEAAPRTL AAPPPLPPLP PTLGTEP-PP PAPEGLHPLP GVSLSLENRE ENSP00000378650/1-436 SGMEAAPRTL AAHPPLPLLP PAMGTEP-AP SAPEALHSLP GVSLSLENRE BACU011909/1-436 SGIEAAPRTL AAPPPLPPLP PTLGTEP-PP PAPEGLHPLP GVSLSLENRE ENSTTRP00000005221/1-435 SGIEAAPRTL AAPPPLPPLP PTLGTEA-PP PAPESLHPLP GVSLSLDNRE 101 150 ENSBTAP00000011919/1-457 LWKEFNSVGT EMIITKAGRR MFPACRVSVT GLDPEARYLF LLDVVPVDGA bmy_00783T0/1-415 LWKEFNSVGT EMIITKAGRR MFPACRVSVT GLDPEARYLF LLDVVPVDGA ENSP00000378650/1-436 LWKEFSSVGT EMIITKAGRR MFPACRVSVT GLDPEARYLF LLDVIPVDGA BACU011909/1-436 LWKEFNSVGT EMIITKAGRR MFPACRVSVT GLDPEARYLF LLDVVPVDGA ENSTTRP00000005221/1-435 LWKEFNSVGT EMIITKAGRR MFPACRVSVT GLDPEARYLF LLDVVPVDGA 151 200 ENSBTAP00000011919/1-457 RYRWQGRRWE PSGKAEPRLP DRVYIHPDSP ATGAHWMRQP VSFHRVKLTN bmy_00783T0/1-415 RYRWQGRRWE PSGKAEPRLP DRVYIHPDSP ATGAHWMRQP VSFHRVKLTN ENSP00000378650/1-436 RYRWQGRRWE PSGKAEPRLP DRVYIHPDSP ATGAHWMRQP VSFHRVKLTN BACU011909/1-436 RYRWQGRRWE PSGKAEPRLP DRVYIHPDSP ATGAHWMRQP VSFHRVKLTN ENSTTRP00000005221/1-435 RYRWQGRRWE PSGKAEPRLP DRVYIHPDSP ATGAHWMRQP VSFHRVKLTN 201 250 ENSBTAP00000011919/1-457 STLDPHGHLI LHSMHKYQPR IHLVRAAQLC SQHWGGVASF RFPETTFISV bmy_00783T0/1-415 STLDPHGHLI LHSMHKYQPR IHLVRAAQLC SQHWGGVASF RFPETMFISV ENSP00000378650/1-436 STLDPHGHLI LHSMHKYQPR IHLVRAAQLC SQHWGGMASF RFPETTFISV BACU011909/1-436 STLDPHGHLI LHSMHKYQPR IHLVRAAQLC SQHWGGVASF RFPETMFISV ENSTTRP00000005221/1-435 STLDPHGHLI LHSMHKYQPR IHLVRAAQLC SQHWGGVASF RFPETMFISV 251 300 ENSBTAP00000011919/1-457 TAYQNPRITQ LKIAANPFAK GFRENGRNCK RERDARVKRK LRGP--EPAA bmy_00783T0/1-415 TAYQNPRMHQ V-VPVIPHWV GTFVSQIQSR PQRPGKLPQP QLLPVVAPVL ENSP00000378650/1-436 TAYQNPQITQ LKIAANPFAK GFRENGRNCK RERDARVKRK LRGP--EPAA BACU011909/1-436 TAYQNPRITQ LKIAANPFAK GFRENGRNCK RERDARVKRK LRGP--EPVA ENSTTRP00000005221/1-435 TAYQNPRITQ LKIAA-PSAT GFRENGRNCK RERDARVKRK LRGP--EPVA 301 350 ENSBTAP00000011919/1-457 TAGYGSGDAP GGPCDSTLGG DVRESDPEQA PVPGLPLPQL LPAVAPVLRP bmy_00783T0/1-415 RPTFCTLQLS MGPLVTFRPG EWDKGTGLGC SRLGIPLP-- ---CSDAS-- ENSP00000378650/1-436 TEAYGSGDTP GGPCDSTLGG DIRESDPEQA PAPGEATAAP APLCGGPSAE BACU011909/1-436 TATYGSGDAP GGPCDSTLGG DVRESDPEQA PAPGEAAPAP APPCGGPSAE ENSTTRP00000005221/1-435 TATYGSGDAP GGPCDSTLGG DARESDPEQA PAPGEAAPAP APPCGGPSAE 351 400 ENSBTAP00000011919/1-457 TCCTLP---- -----LSTGP PVTFQPGIPA SRRLQTLPSA LLSRLPGAAA bmy_00783T0/1-415 ---------- -----LHFRN P-SF-PEAPD SGRPAPYSAA FLELQPGPAG ENSP00000378650/1-436 AYLLHPAAFH GAPSHLPTRS P-SF-PEAPD SGRSAPYSAA FLELPHGSGG BACU011909/1-436 AYLLHPAAFH GAPGHLPTRN P-SF-PEAPD SGRPAPYSAA FLELQPGPAG ENSTTRP00000005221/1-435 AYLLHPAAFH GAPGHLPTRN P-SF-PEAPD SGRPAPYSAA FLELQPGPPG 401 450 ENSBTAP00000011919/1-457 RASRLRIPSS STLSILCLAL PPRGPLPTAL PWAWGLPRCG LQTNVLSLCS bmy_00783T0/1-415 SGYPAAAPPA S----FASHF LQGGPFPLPY PGPGAYLDVG SK-------- ENSP00000378650/1-436 SGYPAAPPAV P----FAPHF LQGGPFPLPY TAPGGYLDVG SK-------- BACU011909/1-436 SGYPAAAPSA S----FASHF LQGGPFPLPY PGPGAYLDVG SK-------- ENSTTRP00000005221/1-435 SGYPAAAPPA S----FASHF LQGGPFPLPY PGPGAYLDVG SK-------- 451 500 ENSBTAP00000011919/1-457 LPPGLLPPHF HYPFPHTK bmy_00783T0/1-415 -------PMY -------- ENSP00000378650/1-436 -------PMY -------- BACU011909/1-436 -------PMY -------- ENSTTRP00000005221/1-435 -------PMY --------