KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:14 2014 Check: 00 .. Name: ENSTTRP00000010425/1-344 Len: 421 Check: 9292 Weight: 1.00 Name: BACU007560/1-393 Len: 421 Check: 5137 Weight: 1.00 Name: ENSBTAP00000011923/1-386 Len: 421 Check: 5426 Weight: 1.00 Name: bmy_16065T0/1-409 Len: 421 Check: 194 Weight: 1.00 Name: ENSP00000349616/1-386 Len: 421 Check: 4305 Weight: 1.00 // 1 50 ENSTTRP00000010425/1-344 MNETAENRLE YSRTPEPDIR LRKGHQLDGT RGGDDDIHQG DLEPLVEASA BACU007560/1-393 MNKTAENRLE YSRTPEPDTM LRKGHQLDGT RRGDNDIHQG DLEPLEEASV ENSBTAP00000011923/1-386 MNETEENRLE HSKTPEPALR LRKGHQLDGA RNGDSGVHHG GREPLVEASV bmy_16065T0/1-409 MNETAENRLE YSRTPEPDIR LRKGHQLDGT RRGDNDIHQG DLEPLVEASV ENSP00000349616/1-386 MNEPTENRLG CSRTPEPDIR LRKGHQLDGT RRGDNDSHQG DLEPILEASV 51 100 ENSTTRP00000010425/1-344 LSSHHKK--- ---------- ---------- XXXXXXXXXX XXXXXXXXXX BACU007560/1-393 LSSYHKK--- ---------- ---------- SLEERRCDDG ASQEDEGFMG ENSBTAP00000011923/1-386 LSSYHKK--- ---------- ---------- SVEERECDDG ASQEDEGFMG bmy_16065T0/1-409 LSSYHKKEKV LFGSFGSWSL SLTVSVIALQ SLEERRCDDG ASQEDEGFMG ENSP00000349616/1-386 LSSHHKK--- ---------- ---------- SSEEHEYSDE APQEDEGFMG 101 150 ENSTTRP00000010425/1-344 XXXXXXXXXX XXXXXXXXXX VWEGRWRVIP HDVLPDWLKD NDFLLHGHRP BACU007560/1-393 MSPLLQAHHA MERMEEFVCK VWEGRWRVIP HDVLPDWLKD NDFLLHGHRP ENSBTAP00000011923/1-386 MSPLLQAHHA MERMEEFVCK VWEGRWRVIP HDVLPEWLKD NDFLLHGHRP bmy_16065T0/1-409 MSPLLQAHHA MERMEEFVCK VWEGRWRVIP HDVLPDWLKD NDFLLHGHRP ENSP00000349616/1-386 MSPLLQAHHA MEKMEEFVCK VWEGRWRVIP HDVLPDWLKD NDFLLHGHRP 151 200 ENSTTRP00000010425/1-344 PMPSFRACFK SIFRIHTETG NIWTHLLGCV FFLCLGIFYM FRPNISFVAP BACU007560/1-393 PMPSFRACFK SIFRIHTETG NIWTHLLGCV LFLCLGIFHM FRPNISFVAP ENSBTAP00000011923/1-386 PMPSFRACFK SIFRIHTETG NIWTHLLGCV FFLCLGIFYM FRPNISFVAP bmy_16065T0/1-409 PMPSFRACFK SIFRIHTETG NIWTHLLGCV FFLCLGIFYM FRPNISFVAP ENSP00000349616/1-386 PMPSFRACFK SIFRIHTETG NIWTHLLGCV FFLCLGIFYM FRPNISFVAP 201 250 ENSTTRP00000010425/1-344 VQEKVVFGLF FLGAILCLSF SWLFHTVYCH SXXXXXXXXX XXXXXXXXXX BACU007560/1-393 LQEKVVFGLF FLGAVLCLSF SWLFHTVYCH SEGVSRVFSK LDYSGIALLI ENSBTAP00000011923/1-386 LQEKVVFGLF FLGAILCLSF SWLFHTVYCH SEGVSRIFSK LDYSGIALLI bmy_16065T0/1-409 VQEKVVFGLF FLGAILCLSF SWLFHTVYCH SEGVSRVFSK LDYSGIALLI ENSP00000349616/1-386 LQEKVVFGLF FLGAILCLSF SWLFHTVYCH SEGVSRLFSK LDYSGIALLI 251 300 ENSTTRP00000010425/1-344 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU007560/1-393 MGSFVPWLYY SFYCNPQPCF IYLIVICGLG IAAIIVSQWD MFATPQYRGV ENSBTAP00000011923/1-386 MGSFVPWLYY SFYCNPQPCF IYLIVICVLG IAAIIVSQWD MFATPQYRGV bmy_16065T0/1-409 MGSFVPWLYY SFYCNPQPCF IYLIVICGLG IAAIIVSQWD MFATPQYRGV ENSP00000349616/1-386 MGSFVPWLYY SFYCNPQPCF IYLIVICVLG IAAIIVSQWD MFATPQYRGV 301 350 ENSTTRP00000010425/1-344 XXXVFLGLGL SGVIPTLHYV ISEGFLKAAT IGQIGWLMLM ASLYITGAAL BACU007560/1-393 RAGVFLGLGL SGVIPTLHYV ISEGFLKAAT IGQIGWLMLM ASLYITGAAL ENSBTAP00000011923/1-386 RAGVFLGLGL SGIIPTLHYV ISEGFLKAAT IGQIGWLLLM AGLYITGAAL bmy_16065T0/1-409 RAGVFLSLGL SGVIPTLHYV ISEGFLKAAT IGQIGWLMLM ASLYITGAAL ENSP00000349616/1-386 RAGVFLGLGL SGIIPTLHYV ISEGFLKAAT IGQIGWLMLM ASLYITGAAL 351 400 ENSTTRP00000010425/1-344 YAARIPERFF PGKCDIW--- ---------- ---------- ---------- BACU007560/1-393 YAARIPERFF PGKCDIWVAG VEFQSVLLCP TLCGRSSSPS LSGFLVYEMR ENSBTAP00000011923/1-386 YAARIPERFF PGKCDIWFHS HQLFHIFV-- ---------- VAGAFVHFHG bmy_16065T0/1-409 YAARIPERFF PGKCDIWFHS HQLFHIFV-- ---------- VAGAFVHFHG ENSP00000349616/1-386 YAARIPERFF PGKCDIWFHS HQLFHIFV-- ---------- VAGAFVHFHG 401 450 ENSTTRP00000010425/1-344 ---------- ---------- - BACU007560/1-393 LTDQVFTKVL FDTKIQ---- - ENSBTAP00000011923/1-386 VSNLQEFRFM VGGGCSEEDA L bmy_16065T0/1-409 VSNLQEFRFM IGGGCSEEDA L ENSP00000349616/1-386 VSNLQEFRFM IGGGCSEEDA L