KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:45:15 2014 Check: 00 .. Name: ENSP00000402661/1-311 Len: 402 Check: 1673 Weight: 1.00 Name: ENSBTAP00000011932/1-311 Len: 402 Check: 8124 Weight: 1.00 Name: bmy_14897T0/1-402 Len: 402 Check: 3163 Weight: 1.00 Name: ENSTTRP00000000244/1-311 Len: 402 Check: 9642 Weight: 1.00 // 1 50 ENSP00000402661/1-311 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011932/1-311 ---------- ---------- ---------- ---------- ---------- bmy_14897T0/1-402 AGPACFASRP RPQESRPFAS APGAPPPEPG RRALRPGPAP KSPALLPPPS ENSTTRP00000000244/1-311 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000402661/1-311 ---------- ---------- ---------- ---------M AGPLWRTAAF ENSBTAP00000011932/1-311 ---------- ---------- ---------- ---------M AGPLWRATVF bmy_14897T0/1-402 EPRPQSWPVI FAPGPALLCA RARRPGLRRR RRFTEVAALM AGPLWRATAF ENSTTRP00000000244/1-311 ---------- ---------- ---------- ---------M AGPLWRATAF 101 150 ENSP00000402661/1-311 VQRHRTGLLV GSCAGLFGVP ISYHLFPDPV VQWLYQYWPQ GQPAPLPPQL ENSBTAP00000011932/1-311 VQRHRTGLLV GSCAGLFGAQ ISYHLFPDPV VQWLYQYWPQ GQPAPLSPEL bmy_14897T0/1-402 VQRHRTALLV GSCAGLLGAQ LSYHLFPDPV VPWLYQYWPQ GQPAPLSPEL ENSTTRP00000000244/1-311 VQRHRTALLV GSCAGLFGAQ ISYHLFPDPV VPWLYQYWPQ GQPASLSPEL 151 200 ENSP00000402661/1-311 QSLFQEVLQD IGVPSGHCYK PFTTFTFQPV SAGFPRLPAG AVVGIPASFL ENSBTAP00000011932/1-311 ERLFQEVQQD IGIPSGHHFE AFTTFTFQPV SAGFPRLPGG AIVGIPASFL bmy_14897T0/1-402 QSLFQEVQQD IGVPSGHRFE AFTTFTFQPV SAGFPRLPAG AVVGIPASFL ENSTTRP00000000244/1-311 QSLFEEVQQD IGVPSGHRFK AFTTFTFQPV SAGFPRLPAG AVVGIPASFL 201 250 ENSP00000402661/1-311 GDLVINTNHP VVIHGHTVDW RSPAGARLRA SLTLSREAQK FALAREVVYL ENSBTAP00000011932/1-311 GGPVTNTDQP VVVHGQRVDW RSPAGTRLRD ALTLSHDAQK FALAKEVVYL bmy_14897T0/1-402 DGPVTNADRP VVVHGQRVDW QSPAGARLRD ALTLSHDAQK FALAREVVYL ENSTTRP00000000244/1-311 GDPVTNADRP VVVHGQRVEW QSPVGARLRD ALTLSHDAQK FALAREVVHL 251 300 ENSP00000402661/1-311 ESSTTAVHAL LAPACLAGTW ALGVGAKYTL GLHAGPMNLR AAFSLVAAVA ENSBTAP00000011932/1-311 ESGAAALQAL PAPACLAGTW ALGVGAKHAL GLYGGPMSLR AAFNLVAAVA bmy_14897T0/1-402 ESGAAALQAL PAPACVAGTW ALGVGAKHAL GLYGGPMNLR AAFNLVAAVA ENSTTRP00000000244/1-311 ESGAAALQAL PAPACLVGTW ALGVGAKHAL GLYGGPMNLR AAFNLVAAVA 301 350 ENSP00000402661/1-311 GFVAYAFSQD SLTHAVESWL DRRTASLSAA YACGGVEFYE KLLSGNLALR ENSBTAP00000011932/1-311 GFVAYAFSTD SLTHGLEAWL DRRTASLSAA YARGGVEFYE KVLSGNLALR bmy_14897T0/1-402 GFVAYALSTD SLTHALEAWL DRRTASLSAA YARGGVEFYE KVLSGNLALR ENSTTRP00000000244/1-311 GFVAYALSTD SLTHSLEAWL DRRTASLSAA YARGGVEFYE KVLSGNLALR 351 400 ENSP00000402661/1-311 SLLGKDGEKL YTPSGNIVPR HLFRIKHLPY TTRRDSVLQM WRGML--NPG ENSBTAP00000011932/1-311 SLLGQRGKKL YTPSGNVIPR HWFRIKHLPY TARRDSVLQM WRAAL--GPG bmy_14897T0/1-402 GLLGSPGEKL YTPSGNVVPR HWFRIKHLPY TARRDSVLQA WRAALGPGPG ENSTTRP00000000244/1-311 GLLGRPGEKL YTPSGNVVPR HWFRIKHLPY TARRDSVLQV WRAAL--SPR 401 450 ENSP00000402661/1-311 RS ENSBTAP00000011932/1-311 SS bmy_14897T0/1-402 SP ENSTTRP00000000244/1-311 SP