KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:45:17 2014 Check: 00 .. Name: ENSP00000307822/1-522 Len: 542 Check: 4799 Weight: 1.00 Name: ENSTTRP00000012457/1-488 Len: 542 Check: 2501 Weight: 1.00 Name: bmy_20726T0/1-281 Len: 542 Check: 7169 Weight: 1.00 Name: ENSBTAP00000011957/1-422 Len: 542 Check: 4996 Weight: 1.00 // 1 50 ENSP00000307822/1-522 MNSFFGTPAA SWCLLESDVS SAPDKEAGRE RRALSVQQRG GPAWSGSLEW ENSTTRP00000012457/1-488 VNSFFGIPAA GCCPL----- ---GDVTGGE RRGRELEGRR RP-------- bmy_20726T0/1-281 ---------- ----M----- ---ARIPGRE K--------- ---------- ENSBTAP00000011957/1-422 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000307822/1-522 SRQSAGDRRR LGLSRQTAKS SWSRSRDRTC CCRRAWWILV PAADRARRER ENSTTRP00000012457/1-488 ---------- ---DPNRQAV RWSRGRIGTC CSPAGSLLVP NGAGGSALAW bmy_20726T0/1-281 ---------- ------IEGN EWG------- ---------- -GHGTLFHNK ENSBTAP00000011957/1-422 ---------- ---------- ---------- ---------- ---------R 101 150 ENSP00000307822/1-522 FIMNEKWDTN SSENWHPIWN VNDTKHHLYS DINITYVNYY LHQPQVAAIF ENSTTRP00000012457/1-488 SIMSENWDSN PSENWHPIWS VSDTKHDLYA DSNITYVNYY LHQPQVAAIF bmy_20726T0/1-281 SIMSENWDSN SSEXWHPIWS VSDTKHDLYA DSNITYVNCY LHQPQVAAIF ENSBTAP00000011957/1-422 SIMSEEWDSN STENWHYIWN -NATTHDLYS DINITYVNYY LHQPQVAAIF 151 200 ENSP00000307822/1-522 IISYFLIFFL CMMGNTVVCF IVMRNKHMHT VTNLFILNLA ISDLLVGIFC ENSTTRP00000012457/1-488 IISYFLTFFL CMVGNTVVCF IVMRNTHMHT VTNFFTLNLA ISDLLVGIFC bmy_20726T0/1-281 IISYFLIFFL CMVGNTVVCF IVMRNKHMHT LTNLFILNLA ISDLLVGIFC ENSBTAP00000011957/1-422 IISYFLIFFL CMVGNTVVCF IVMRNKHMHT VTNLFILNLA ISDLLVGIFC 201 250 ENSP00000307822/1-522 MPITLLDNII A--------- ---------- -GWPFGNTMC KISGLVQGIS ENSTTRP00000012457/1-488 MPITLLDNII A--------- ---------- -GWPFGSTMC KISGLVQGIS bmy_20726T0/1-281 MPITLLDNII AVKLKNIYMI FPKTNCPISL SGWPFGSTM- ---------- ENSBTAP00000011957/1-422 MPITLLDNII A--------- ---------- -GWPFGSTMC KISGLVQGIS 251 300 ENSP00000307822/1-522 VAASVFTLVA IAVDRFQCVV YPFKPKLTIK TAFVIIMIIW VLAITIMSPS ENSTTRP00000012457/1-488 VAASVFTLAA IAVDRFQCVF YPFKPKLTIK TAFVIITIIW ILAIAIMSPS bmy_20726T0/1-281 ---------- -----FRCVV YPFKPKLTIK TAFVIIMIIW VLAIAIISPS ENSBTAP00000011957/1-422 VAASVFTLVA IAVDRFRCVI YPFKPKLTIK TAFVIIMIIW VLAIAIMSPS 301 350 ENSP00000307822/1-522 AVMLHVQEEK YYRVRLNSQN KTSPVYWCRE DWPNQEMRKI YTTVLFANIY ENSTTRP00000012457/1-488 AIMLHVQEEK YYRVRLNSQN KTSPVYWWRG DWPNRGKRKI YTTVLFANIY bmy_20726T0/1-281 AIMLHVQEEK YYRVRLNSQN KTSPVYWCRE DWPNREMRKI YTTVLFANIY ENSBTAP00000011957/1-422 AVMLHVQEEK NYRVRFNSQD KTSPVYWCRE DWPSQEMRRI YTTVLFANIY 351 400 ENSP00000307822/1-522 LAPLSLIVIM YGRIGISLFR AAVPHTGRKN QEQWHVVSRK KQKIIKMLLI ENSTTRP00000012457/1-488 LAPLSLIVIM YGRIGIALSK TTVPHSGKQN QEQWHVVTKK QQKVIKMLLT bmy_20726T0/1-281 LAPLSLIVIM YGRIGIALSK TTVPHSGKQN QE-------- ---------- ENSBTAP00000011957/1-422 LAPLSLIVIM YGRIGISLFK RKVPHTGKQN REQWHVVSKK KQKIIKMLLT 401 450 ENSP00000307822/1-522 VALLFILSWL PLWTLMMLSD YADLSPNELQ IINIYIYPFA HWLAFGNSSV ENSTTRP00000012457/1-488 VALLFILSWL PLWT-MMLSH YVDLSLNELR VINTYIYPLA HWLAFGNSSI bmy_20726T0/1-281 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011957/1-422 VALLFILSWL PLWTLMMLSD YVDLSANELQ VINIYIYPFA HWLAFCNSSV 451 500 ENSP00000307822/1-522 NPIIYGFFNE NFRRGFQEAF QLQLCQKRAK PMEAYALKAK SHVLINTSNQ ENSTTRP00000012457/1-488 NPIIYGFFNE NFCRGFQDAF RLHLCQKREK PKEAYTLRAK NNVVINISHL bmy_20726T0/1-281 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011957/1-422 NPIIYGFFNE NFRRGFQDAF HLQLCQKRAK SKEVYTLRAK NTVVINTSHL 501 550 ENSP00000307822/1-522 LVQESTFQNP HGETLLYRKS AEKPQQELVM EELKETTNSS EI ENSTTRP00000012457/1-488 SAQESTIKNP HEDIVLCK-- AEKPIQELMI KN--ELTDSN EM bmy_20726T0/1-281 ---------- ---------- ---------- ---------- -- ENSBTAP00000011957/1-422 SAQESTVKNP HEETVLCRIS AEKPLQELMM EELGEITSSN EM