KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:24 2014 Check: 00 .. Name: ENSP00000465589/1-666 Len: 680 Check: 6658 Weight: 1.00 Name: ENSBTAP00000012001/1-678 Len: 680 Check: 5008 Weight: 1.00 Name: bmy_06925T0/1-593 Len: 680 Check: 6985 Weight: 1.00 Name: BACU002578/1-571 Len: 680 Check: 4322 Weight: 1.00 Name: ENSTTRP00000012424/1-672 Len: 680 Check: 3746 Weight: 1.00 // 1 50 ENSP00000465589/1-666 -------MTG TPKTQEGAKD LEVDMNKTEV TPRLWTTCRD GEVLLRLSKH ENSBTAP00000012001/1-678 MVSRPRRPET QTTQEEKAED LKVDMSQEQV TPRLWTIHRD GEVLMRLSKH bmy_06925T0/1-593 ---------- --MSQSGAGA QCLNEWICEK RSRKCPGSRS GGRVGRQGQP BACU002578/1-571 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012424/1-672 ------RAET SMTREEKAKD LKAGMSQERV TPGLWTIHRD GEVLMRLSKH 51 100 ENSP00000465589/1-666 GPGHETP-MT IPE-FFRESV NRFGTYPALA SKNGKKWEIL NFNQYYEACR ENSBTAP00000012001/1-678 GPGHESP-LT IPE-FFRESV NRFGSYPALA SKKNGRWEVL NYNQYYEACR bmy_06925T0/1-593 VTSQEVAGRK VPEGWMGASA VKFGV----- -------RLL AF------CT BACU002578/1-571 --------MT IPE-FFRESV NRFGTYPALA SKKNGKWEVL NYNQYYEACR ENSTTRP00000012424/1-672 GPGHETP-MT IPE-FFRESV NRFGTYPALA SKKNGKWEVL NYNQYYEACR 101 150 ENSP00000465589/1-666 KAAKSLIKLG LERFHGVGIL GFNSAEWFIT AVGAILAGGL CVGIYATNSA ENSBTAP00000012001/1-678 KTARAMLKLG LEPFHSVGIL GFNSIEWILA ALGAIFAGGF CVGIYATNFA bmy_06925T0/1-593 VSTKEL---G LEPFHSVGIL GFNSVEWFLA ALGAIFAGGF CVGIYATNSA BACU002578/1-571 KAARALLKLG LEPFHSVGIL GFNSVEWFLA ALGAIFAGGF CVGIYATNSA ENSTTRP00000012424/1-672 KAARALLKLG LEPFHSVGIL GFNSVEWFLA ALGAIFARGF CVGIYATNSA 151 200 ENSP00000465589/1-666 EVCQYVITHA KVNILLVEND QQLQKILSIP QSSLEPLKAI IQYRLPMKKN ENSBTAP00000012001/1-678 DACEYVITHA KVNILLLENN AQLQKILSIP MNKMETLKAI VQYKPPVDDS bmy_06925T0/1-593 EACQYIIAHA KVNILLVEND LQLQKILSIP KTKMETLKAI VQYRLPVKES BACU002578/1-571 EVCQYIIAHA KVNILLVEND LQLQKILSIP KTKMETLKAI VQYRLPVKES ENSTTRP00000012424/1-672 EACQHIIAHA KVNILLVEND LQLQKILSIP KTKMETLKAI VQYRLPVKES 201 250 ENSP00000465589/1-666 --NNLYSWDD FMELGRSIPD TQLEQVIESQ KANQCAVLIY TSGTTGIPKG ENSBTAP00000012001/1-678 KCENLYSWDD FLELGSSIPD AQLDQIIKSQ KANQCAVIIY TSGTTGQPKG bmy_06925T0/1-593 ECNHLYS--- ---------- ---------- ---------- ---------- BACU002578/1-571 KCNNLYS--- ---------- ---------- ---------- ---------- ENSTTRP00000012424/1-672 KCNNLYSWDD FMELGNSIPE SQLDQIIKSQ KANQCAVIIY TSGTVGYPKG 251 300 ENSP00000465589/1-666 VMLSHDNITW IAGAVTKDFK LT---DKHET VVSYLPLSHI AAQMMDIWVP ENSBTAP00000012001/1-678 VMLSHDNITW TAGSVAKECN LAYAPEKQEV VVSYLPLSHI AAQMMDVWVP bmy_06925T0/1-593 -------ITW TAGSVARDFN LAYAPEKQEV VVSYLPLSHI AAQMMDVWIP BACU002578/1-571 -------ITW TAGSVARDFN LAYAPEKQEV VVSYLPLSHI AAQMMDVWIP ENSTTRP00000012424/1-672 VMLSHDNITW TAGSVARDFH LAYAPEKQEV VVSYLPLSHI AAQMMDVWIP 301 350 ENSP00000465589/1-666 IKIGALTYFA QADALKGTLV STLKEVKPTV FIGVPQIWEK IHEMVKKNSA ENSBTAP00000012001/1-678 IKVGAFIYFA EPDALKGTLV NTLQEVKPTA FLGVPRIWEK MHEKIKEAVG bmy_06925T0/1-593 MKV----WLT QLCALQGTLV NTLQEVKPTA FLGVPRIWEK MHEKIKETVG BACU002578/1-571 MKVGASVYFA QPDALKGTLV NTLQEVKPTA FLGVPRIWEK MHEKIKETVG ENSTTRP00000012424/1-672 MKVGAFIYFA QPDALKGTLV NTLQEVKPTA FLGVPRIWEK MHEKIKETVG 351 400 ENSP00000465589/1-666 KSMGLKKKAF VWARNIGFKV NSKKMLGKYN TPVSYRMAKT LVFSKVKTSL ENSBTAP00000012001/1-678 KSSSLRKKVF LWARNIGLKV NSKRMLGEHD HPMSYRMAKA LVFTKIKNSL bmy_06925T0/1-593 KSSSLRRKVF SWARNIGFKV NSKRMRGGXD TPMSYRMAKA LVFTKMKNSL BACU002578/1-571 KSSSLRRKVF SWARNIGFKV NSERMRGGRD TPMSYRMAKA LVFTKIKNSL ENSTTRP00000012424/1-672 KSSSLRRKVF SWARNIGFQV NSKRMQGGHD NPMSYRMAKA LVFTKIKNSL 401 450 ENSP00000465589/1-666 GLDHCHSFIS GTAPLNQETA EFFLSLDIPI GELYGLSESS GPHTISNQNN ENSBTAP00000012001/1-678 GLDHCRIFIS GAAPLNQETS EFFLSLDIPI GEVYGMSESS GPHTISTPAN bmy_06925T0/1-593 GLDRCRIFIS GAAPLNQETA EFFLSLDIPI GEAYGMSESS GPHSTSSPEN BACU002578/1-571 GLDRCRIFIS GAAPLNQETA EFFLSLDIPI GEAYGMSESS GPHSTSSPEN ENSTTRP00000012424/1-672 GLDRCCIFIS GAAPLNQETA EFFLSLDIPI GEAYGMSESS GPHSASSPEN 451 500 ENSP00000465589/1-666 YRLLSCGKIL TGCKNMLFQQ NKDGIGEICL WGRHIFMGYL ESETETTEAI ENSBTAP00000012001/1-678 YKFLSSGKVV AGCKNMLYQP NKDGVGEVCL WGRHVFMGYL EQEDATMEAI bmy_06925T0/1-593 YRILSSGKVM TGCKNMLYQQ TKDGVGEICL WGRHVFMGYL EREDATVEAI BACU002578/1-571 YRILSSGKVM TGCKNMLYQQ TKDGVGEICL WGRHVFMGYL EREDATVEAI ENSTTRP00000012424/1-672 YRILSSGKVT TGCKNMLYQQ TKDGVGEICL WGRHVFMGYL ESEDATVEAI 501 550 ENSP00000465589/1-666 DDEGWLHSGD LGQLDGLGFL YVTGHIKEIL ITAGGENVPP IPVETLVKKK ENSBTAP00000012001/1-678 DDEGWLHSGD LGRMDNQGFL FITGRIKEII ITAGGENVAP VPIENLVKET bmy_06925T0/1-593 DEEGWLHSGD LGRMDNQGFL FITGRIKEII ITAGGENVAP IPIENLVKEK BACU002578/1-571 DEEGWLHSGD LGRVDNQGFL FITGRIKEII ITAGGENVAP IPIENLVKEK ENSTTRP00000012424/1-672 DEEGWLHSGD LGRMDNQGFL FITGRIKEII ITAGGENVAP IPIENLVKEK 551 600 ENSP00000465589/1-666 IPIISNAMLV GDKLKFLSML LTLKCEMNQM SGEPLDKLNF EAINFCRGLG ENSBTAP00000012001/1-678 IPIISNAMLV GDKAKFLSIL LTLKCEVDKM TGEPLDTLNL EAIKFCREVG bmy_06925T0/1-593 IPIISNAMLV GDKAKFLGVL LTLKCEVDKT TGEPLDRLTW EAIRFCRDAG BACU002578/1-571 IPIISNAMLV GDKAKFLGVL LTLKCEVDKT TGEPLDRLTW EAIRFCRDAG ENSTTRP00000012424/1-672 IPIISNAMLV GDKAKFLSVL LTLKCEVDKT TGEPLDRLTW EAIRFCRDAG 601 650 ENSP00000465589/1-666 SQASTVTEIV KQQDPLVYKA IQQGINAVNQ EAMNNAQRIE KWVILEKDFS ENSBTAP00000012001/1-678 SQATTVSEIL DLRDPMVYAA IQKGINAVNQ KAISNAQKIQ KWVILEKDFS bmy_06925T0/1-593 SQASTVSEIL ELRDPLVYTA IQKGINAVNQ CAISDAQKIQ KWVILEKDFS BACU002578/1-571 SQASTVSEIL ELRDPLVYTA IQKGINAVNQ RAISDAQKIQ KWVILEKDFS ENSTTRP00000012424/1-672 SQATTVSEIL ELRDPLVYTA IQKGINAVNQ CTISNAQKIQ KWVILEKDFS 651 700 ENSP00000465589/1-666 IYGGELGPMM KLKRHFVAQK YKKQIDHMYH ENSBTAP00000012001/1-678 ISGGELGPTT KIKRHFILQK YKRQIYSFYQ bmy_06925T0/1-593 ISGGELGPTT KIKRHFIIQK YKKQIDNFYQ BACU002578/1-571 ISGGELGPTT KIKRHFIIQK YKKQIDNFYQ ENSTTRP00000012424/1-672 ISGGELGPTT KIKRHFIMQK YKKQIDNFYQ