KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:25 2014 Check: 00 .. Name: ENSTTRP00000007113/1-608 Len: 634 Check: 7936 Weight: 1.00 Name: ENSP00000417229/1-585 Len: 634 Check: 1207 Weight: 1.00 Name: ENSBTAP00000012002/1-585 Len: 634 Check: 1057 Weight: 1.00 Name: bmy_14736T0/1-619 Len: 634 Check: 4734 Weight: 1.00 Name: BACU012807/1-593 Len: 634 Check: 1451 Weight: 1.00 // 1 50 ENSTTRP00000007113/1-608 EETCWGRVRL SNSDPSSFSF RNKMAPSTPL LTVRGSEGLY MVNGPPHFTE ENSP00000417229/1-585 ---------- ---------- ---MAPSTPL LTVRGSEGLY MVNGPPHFTE ENSBTAP00000012002/1-585 ---------- ---------- ---MAPSTPL LTVRGSEGLY MVNGPPHFTE bmy_14736T0/1-619 ---------- -----MSFSF RDKMAPSTPL LTVRGSEGLY MVNGPPHFTE BACU012807/1-593 ---------- -----MSFSF RDKMAPSTPL LTVRGSEGLY MVNGPPHFTE 51 100 ENSTTRP00000007113/1-608 STVFPRESGK NCKTCTFSKD GTLFAWGNGE KINVINVTNK GQLHSFDLPK ENSP00000417229/1-585 STVFPRESGK NCKVCIFSKD GTLFAWGNGE KVNIISVTNK GLLHSFDLLK ENSBTAP00000012002/1-585 STVFPRESGK NCKAYTFSKD GTLFAWGNGE KINVISVTKK GLLHSFDLPK bmy_14736T0/1-619 STVFPRESGK NCKTCTFSKD GTLFAWGNGE KINVINVTNK GLQHSFDLPK BACU012807/1-593 STVFPRESGK NCKTCTFSKD GTLFAWGNGE KINVINVTNK GLLHSFDLPK 101 150 ENSTTRP00000007113/1-608 TVCLEFSPKN TVLATWQPYT TSKDDTAGIP NLQLYDVKTG TCLKSFIQKK ENSP00000417229/1-585 AVCLEFSPKN TVLATWQPYT TSKDGTAGIP NLQLYDVKTG TCLKSFIQKK ENSBTAP00000012002/1-585 AVCLEFSPKN TVLATWQPYT ASKDDTAGIP NLQLYDVKTG TCLKSFIQKK bmy_14736T0/1-619 AVCLEFSPKN TVLATWQPYT TSKDDTAGIP NLQLYDVKTG TCLKSFIQKK BACU012807/1-593 AVCLEFSPKN TVLATWQPYT TSKDDTAGIP NLQLYDVKTG TCLKSFIQKK 151 200 ENSTTRP00000007113/1-608 MQNWCPSWSE DETLCARNVN NEVHFFENNN FNTFASKLHL KKINDFVLSP ENSP00000417229/1-585 MQNWCPSWSE DETLCARNVN NEVHFFENNN FNTIANKLHL QKINDFVLSP ENSBTAP00000012002/1-585 MQNWCPSWSE DETLCARNVN NEVHFFENNN FNTIANKLHL KKINDFVLSP bmy_14736T0/1-619 MQNWCPSWSE DETLCAQNVN NEVHFFENNN FNTFANKLHL KKINDFVLSP BACU012807/1-593 MQNWCPSWSE DETLCARNVN NEVHFFENNN FNTFANKLHL KKINDFVLSP 201 250 ENSTTRP00000007113/1-608 GPQPYKVAVY VPGSKGAPSF VRLYQYPNFD GPHAALANKS FFKADKVTML ENSP00000417229/1-585 GPQPYKVAVY VPGSKGAPSF VRLYQYPNFA GPHAALANKS FFKADKVTML ENSBTAP00000012002/1-585 GPQPYKVAVY VPGSKGAPSF VRLYQYPNFD EPHAALANKS FFKADKVTML bmy_14736T0/1-619 GLQPYKVAVY VPGSKGAPSF VRLYQYPNFD GPHAALANKS FFKADKVTML BACU012807/1-593 GLQPYKVAVY VPGSKGAPSF VRLYQYPNFD GPHAALANKS FFKADKVTML 251 300 ENSTTRP00000007113/1-608 WNKKATAVLV IASTEVDKTG ASYYGEQTLH YIATNGESAV VQLPKNGPIY ENSP00000417229/1-585 WNKKATAVLV IASTDVDKTG ASYYGEQTLH YIATNGESAV VQLPKNGPIY ENSBTAP00000012002/1-585 WNKKATAVLV IASTDVDKTG ASYYGEQTLH YIATNGESAV VQLPKNGPIY bmy_14736T0/1-619 WNKKATAVLV IASTDVDKTG ASYYGEQTLH YIATNGESAV VQLPKNGPIY BACU012807/1-593 WNKKATAVLV IASTDVDKTG ASYYGEQTLH YIATNGESAV VQLPKNGPIY 301 350 ENSTTRP00000007113/1-608 DVVWNSSSTE FCAVYGFMPA KATVFNLKCD PVFDFGTGPR NAAYYSPHGH ENSP00000417229/1-585 DVVWNSSSTE FCAVYGFMPA KATIFNLKCD PVFDFGTGPR NAAYYSPHGH ENSBTAP00000012002/1-585 DVVWNSSSTE FCAVYGFMPA KATVFNLKCD PVFDFGTGPR NAAYYSPHGH bmy_14736T0/1-619 DVVWNSSSTE FCAVYGFMPA KATIFNLKCD PVFDFGTGPR NAAYYSPHGH BACU012807/1-593 DVVWNSSSTE FCAVYGFMPA KATIFNLKCD PVFDFGTGPR NAAYYSPHGH 351 400 ENSTTRP00000007113/1-608 ILVLAGFGNL RGQMEVWDVK NYKLISKPVA SDSTYFAWCP DGEHILTATC ENSP00000417229/1-585 ILVLAGFGNL RGQMEVWDVK NYKLISKPVA SDSTYFAWCP DGEHILTATC ENSBTAP00000012002/1-585 ILVLAGFGNL RGQMEVWDVK KYKLISKPVA SDSTYFAWCP DGEHILTATC bmy_14736T0/1-619 ILVLAGFGNL RGQMEVWDVK NYKLISKPVA SDSTYFAWCP DGEHILTATC BACU012807/1-593 ILVLAGFGNL RGQMEVWDVK NYKLISKPVA SDSTYFAWCP DGEHILTATC 401 450 ENSTTRP00000007113/1-608 APRLRVNNGY KIWHYTGSVL HKYDVPSNAE LWQVSWQPFL DGIFPEKAIT ENSP00000417229/1-585 APRLRVNNGY KIWHYTGSIL HKYDVPSNAE LWQVSWQPFL DGIFPAKTIT ENSBTAP00000012002/1-585 APRLRVNNGY KIWHYTGSVL HKYDVPSNAE LWQVSWQPFL DGIFPEKAIT bmy_14736T0/1-619 APRLRVNNGY KIWHYTGAVL HKYEVPSNAE LWQVSWQPFL DGIFPEKAIT BACU012807/1-593 APRLRVNNGY KIWHYTGAVL HKYDVPSNAE LWQVSWQPFL DGIFPEKAIT 451 500 ENSTTRP00000007113/1-608 YQAVPSDVPS EEPKVATAYR PPALRNKPVT NSKLHEEEPP QNMKPQPGNE ENSP00000417229/1-585 YQAVPSEVPN EEPKVATAYR PPALRNKPIT NSKLHEEEPP QNMKPQSGND ENSBTAP00000012002/1-585 YQVVPSDVPS EEPKVATAYR PPALRNKPVT NSKLHEEEPP QNMKPQPGNE bmy_14736T0/1-619 YQAVPSDVPS EEPKVATAYR PPALRNKPVT NSKLHEEEPP QNMKPQPGNE BACU012807/1-593 YQAVSSDVPS EEPKVATAYR PPALRNKPVT NSKLHEEEPP QNMKPQPGNE 501 550 ENSTTRP00000007113/1-608 KPLSKTALKN QRKHEAKKAA KQDAIGDKSS DMAPTPAPXX XXXXXXXXXX ENSP00000417229/1-585 KPLSKTALKN QRKHEAKKAA KQEARSDKSP DLAPTPAPQS TPRNTVSQSI ENSBTAP00000012002/1-585 KPLSKTALKN QRKHEAKKAA KQEARIDKSP DMPPAPAQQS TPRSTISQST bmy_14736T0/1-619 KPLSKTALKN QRKHEAKKAA KQEARSDKSP DMAPTPAPQS TPRNTISQST BACU012807/1-593 KLLSKTALKN QRKHEAKKAA KQEARSDKSP DMAPTPAPQS TPRHTLSQST 551 600 ENSTTRP00000007113/1-608 XXXXXXXXXX XXXXXKLKAI EQLKEQAATG KQLEK----- ---------- ENSP00000417229/1-585 SGDPEIDKKI KNLKKKLKAI EQLKEQAATG KQLEK----- ---------- ENSBTAP00000012002/1-585 SGDPETDRKI KNLKKKLRAI EQLKEQAAAG KQLEK----- ---------- bmy_14736T0/1-619 SGDPEIDKKI KNLKKKLKAI EQLKEQAATG KQLEKNQVFS AFFIGAHSHY BACU012807/1-593 SGDPEIDKKI KNLKKKLKAI EQLKEQAATG KQLEK----- ---------- 601 650 ENSTTRP00000007113/1-608 ---------- -NQLEKIQKE KALLQELEDL ELGI ENSP00000417229/1-585 ---------- -NQLEKIQKE TALLQELEDL ELGI ENSBTAP00000012002/1-585 ---------- -NQLEKIQKE KALLQELEDL ELGI bmy_14736T0/1-619 HPSPFYYKQL FNQLAKIQKE KALLQELEDL ELGI BACU012807/1-593 ---------- -NQLAKIQKE KALLQELEDL ELGI