KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:45:25 2014 Check: 00 ..
Name: ENSP00000269385/1-389 Len: 389 Check: 1902 Weight: 1.00
Name: ENSBTAP00000012004/1-355 Len: 389 Check: 7299 Weight: 1.00
Name: BACU004736/1-371 Len: 389 Check: 2346 Weight: 1.00
Name: bmy_02288T0/1-350 Len: 389 Check: 1799 Weight: 1.00
Name: ENSTTRP00000014657/1-367 Len: 389 Check: 9668 Weight: 1.00
//
1 50
ENSP00000269385/1-389 MELSAVGERV FAAEALLKRR IRKGRMEYLV KWKGWSQKYS TWEPEENILD
ENSBTAP00000012004/1-355 ---------- ---------- --QGRMEYLV KWKGWSQKYS TWEPEENILD
BACU004736/1-371 MELSAVGERV FAAEALLKRR IRKGRMEYLV KWKGWSQKYS TWEPEENILD
bmy_02288T0/1-350 ---------- ---------- -----MEYLV KWKGWSQKYS TWEPEENILD
ENSTTRP00000014657/1-367 MELSAVGERV FAAEALLKRR IRKGRMEYLV KWKGWSQKYS TWEPEENILD
51 100
ENSP00000269385/1-389 ARLLAAFEER EREMELYGPK KRGPKPKTFL LKAQAKAKAK TYEFRSDSAR
ENSBTAP00000012004/1-355 ARLLAAFEER EREMELYGPK KRGPKPKTFL LKAQAKAKAK TYEFRSDSAR
BACU004736/1-371 ARLLAAFEER EREMELYGPK KRGPKPKTFL LKAQAKAKAK TYEFRSDSAR
bmy_02288T0/1-350 ARLLAAFEER EREMELYGPK KRGPKPKTFL LKAQAKAKAK TYEFRSDSAR
ENSTTRP00000014657/1-367 ARLLAAFEER EREMELYGPK KRGPKPKTFL LKAQAKAKAK TYEFRSDSAR
101 150
ENSP00000269385/1-389 GIRIPYPGRS PQDLASTSRA REGLRNMGLS PPASSTSTSS TCRAEAPRDR
ENSBTAP00000012004/1-355 GIRIPYPGRS PQELASTSRS REGLRNMGLS PPGSSSSTSS TCRVEPS--R
BACU004736/1-371 GIRIPYPGRS PQELASTSRA REGLRNMGLS PPGSSSP--- -CRVEPP---
bmy_02288T0/1-350 GIRIPYPGRS PQELASTSRA REGLRNMGLS PPGSSST--- -CRVEPPRDR
ENSTTRP00000014657/1-367 GIRIPYPGRS PQELASTSRA REGLRNMGLS PPGSSST--- -CRVEPP---
151 200
ENSP00000269385/1-389 DRDRDRDRER DRERERERER ERERERERER GTSRVDDKPS SPGDSSKKRG
ENSBTAP00000012004/1-355 DRERDRD--- -------RER ERERERERER GTSRADDKPS SPGDSSKKRG
BACU004736/1-371 -RDRDRE--- -------RDR ERERERERER GASRADDKPS SPGDSSKKRG
bmy_02288T0/1-350 DRDRDRD--- -------RDR ERERERERER GASRADDKPS SPGDSSKKRG
ENSTTRP00000014657/1-367 -----RD--- -------RDR ERERERERER GASRTDDKPS SPGDSSKKRG
201 250
ENSP00000269385/1-389 PKPRKELPDP SQRPLGEPSA GLGEYLKGRK LDDTPSGAGK FPAGHSVIQL
ENSBTAP00000012004/1-355 PKPRKELLDP SQRPLGEPSD GLGDYLKGRK LDDTASGAGK FPAGHSVIQL
BACU004736/1-371 PKPRKELLDP SQRPLGEPSD GLGDYLKGRK LDDTASGAGK FPAGHSVIQL
bmy_02288T0/1-350 PKPRKELLDP SQRPLGEPSD GLGDYLKGRK LDDTASGAGK FPAGHSVIQL
ENSTTRP00000014657/1-367 PKPRKELLDP SQRPLGEPSD GLGDYLKGRK LDDTASGAGK FPAGHSVIQL
251 300
ENSP00000269385/1-389 ARRQDSDLVQ CGVTSPSSAE ATGKLAVDTF PARVIKHRAA FLEAKGQGAL
ENSBTAP00000012004/1-355 ARRQDSDLAQ CGVASPSPAE ATGKLAVDTF PARVIKHRAA FLEAKGQGTL
BACU004736/1-371 ARRQDSDLAQ CGVASPSPAE ATGKLAVDTF PARVIKHRAA FLEAKGQGTL
bmy_02288T0/1-350 ARRQDSDLAQ CGVASPSPAE ATGKLAVDTF PARVIKHRAA FLEAKGQGTL
ENSTTRP00000014657/1-367 ARRQDSDLAQ CGVASPSPAE ATGKLAVDTF PARVIKHRAA FLEAKGQGTL
301 350
ENSP00000269385/1-389 DPNGTRVRHG SGPPSSGGGL YRDMGAQGGR PSLIARIPVA RILGDPEEES
ENSBTAP00000012004/1-355 DPGGPRVRHG SGTPGSVGGL YRDMGAQGGR PSLIARIPVA RILGDPEEES
BACU004736/1-371 DPGGPRGRHG SGTPSSVGGL YRDMGAQGGR PSLIARIPVA RILGDPEEES
bmy_02288T0/1-350 DPGGPRVRHG SGTPSSVGGL YRDMGAQGGR PSLIARIPVA RILGDPEEES
ENSTTRP00000014657/1-367 DPGGPRVRHG SGTPSSVGGL YRDMGAQGGR PSLIARIPVA RILGDPEEES
351 400
ENSP00000269385/1-389 WSPSLTNLEK VVVTDVTSNF LTVTIKESNT DQGFFKEKR
ENSBTAP00000012004/1-355 WSPSLTNLEK VVVTDVTSNF LTVTIKESNT DQGFFKEKR
BACU004736/1-371 WSPSLTNLEK VVVTDVTSNF LTVTIKESNT DQGFFKEKR
bmy_02288T0/1-350 WSPSLTNLEK VVVTDVTSNF LTVTIKESNT DQGFFKEKR
ENSTTRP00000014657/1-367 WSPSLTNLEK VVVTDVTSNF LTVTIKESNT DQGFFKEKR