KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:27 2014 Check: 00 .. Name: ENSTTRP00000009473/1-743 Len: 743 Check: 3520 Weight: 1.00 Name: ENSP00000434887/1-743 Len: 743 Check: 8548 Weight: 1.00 Name: ENSBTAP00000012015/1-743 Len: 743 Check: 1208 Weight: 1.00 Name: bmy_11038T0/1-743 Len: 743 Check: 530 Weight: 1.00 Name: BACU013797/1-602 Len: 743 Check: 4647 Weight: 1.00 // 1 50 ENSTTRP00000009473/1-743 MLHFNRCQHL XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000434887/1-743 MLHFNRCHHL KKITQKCFSS IHVKTDKHAQ RFLSRTFALA ELRKSWYSTH ENSBTAP00000012015/1-743 MLHFKRCQLL KQIAQKCLSR IHVKTDKHPQ LFLSRTFALA ELRKSWHSIY bmy_11038T0/1-743 MLHFNRCQHL KQITQKCFSS THVKTDKHAQ LFLSRTFALA ELRKSWHSIY BACU013797/1-602 MLHFNRCQHL KQITQKCFSS THVKTDKHAQ LFLSRTFALA ELRKSWHSIY 51 100 ENSTTRP00000009473/1-743 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000434887/1-743 SLVGDKNIIL MGPPGAGKTT VGRIIGQKLG CCVIDVDDDI LEKTWNMSVS ENSBTAP00000012015/1-743 SLVGDKNIIL MGPPGAGKTT VGRIIGQKLG CCVIDVDDDI LEKTWNMSVS bmy_11038T0/1-743 SLVGDKNIIL MGPPGAGKTT VGRIIGQKLG CCVIDVDDDI LEKTWNMSVS BACU013797/1-602 SLVGDKNIIL MGPPGAGKTT VGRIIGQKLG CCVIDVDDDI LEKTWNMSVS 101 150 ENSTTRP00000009473/1-743 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXKKMGI ENSP00000434887/1-743 EKLQDVGNEQ FLEEEGKAVL NFSASGSVIS LTGSNPMHDA SMWHLKKNGI ENSBTAP00000012015/1-743 EKLQDVGNEQ FLEEEGKAVL NFSASGSVIS LTGSNPMHDA SMWHLKKNGI bmy_11038T0/1-743 EKLQDVGNEQ FLEEEGKAVL NFSASGSVIS LTGSNPMHDA SMRHLKKNGI BACU013797/1-602 EKLQDVGNEQ FLEEEGKAVL NFSASGSVIS LTGSNPMHDA SMRHLKKNGI 151 200 ENSTTRP00000009473/1-743 MFYLDVPPID IVSRLNLMKI DRIVGQNSGT SMKDLLKFRR QYYKKWYDTR ENSP00000434887/1-743 IVYLDVPLLD LICRLKLMKT DRIVGQNSGT SMKDLLKFRR QYYKKWYDAR ENSBTAP00000012015/1-743 IVYLDVPLLD IVSRLKLMKT DRIVGQNSGT SMKDLLKFRR QYYKKWYDTR bmy_11038T0/1-743 IVYLDVPPID IVSRLKLMKI DRIVGQNSGT SMKDLLKFRR QYYKKWYDTR BACU013797/1-602 IVYLDVPPID IASRLKLMKI DRIVGQNSGT SMKDLLKFRR QYYKKWYDTR 201 250 ENSTTRP00000009473/1-743 VLCENGASPE EVADKVLNAV KRYQDVDSET FISTRHIWPK DCEQKVPTKF ENSP00000434887/1-743 VFCESGASPE EVADKVLNAI KRYQDVDSET FISTRHVWPE DCEQKVSAKF ENSBTAP00000012015/1-743 VFCESGASPE EVANKVLSAV KRYQDVASET FISTRHIWPK DCEQKIPAKF bmy_11038T0/1-743 VLCENGASPE EVADKVLNAV KRYQDVDSET FISTRHIWPK DCEQKVPTKF BACU013797/1-602 VLCEDGASPE EVADKVLNAV KRYQDVDSET FISTRHIWPK DCEQKVPTKF 251 300 ENSTTRP00000009473/1-743 FSEAVTEGLA PDGGLFVPEK EFPKLNFGEW KSLVGATYVE RAQILLEKCI ENSP00000434887/1-743 FSEAVIEGLA SDGGLFVPAK EFPKLSCGEW KSLVGATYVE RAQILLERCI ENSBTAP00000012015/1-743 FSEAVIEGLA SDGGLFVPEK EFPKLNCGEW KSLVGATYIE RAQILLEKCI bmy_11038T0/1-743 FSEAVIEGLA PDGGLFVPEK EFPKLNCGEW KSLVGATYIE RAQILLEKCI BACU013797/1-602 FSEAVTEGLA PDGGLFVPEK EFPKLNCGEW KSLVGATYIE RAQVLLEKCI 301 350 ENSTTRP00000009473/1-743 HPADIPASRL GEMIETAYGE NFACSKIAPV RHLSGNQFIL ELFHGPTGSF ENSP00000434887/1-743 HPADIPAARL GEMIETAYGE NFACSKIAPV RHLSGNQFIL ELFHGPTGSF ENSBTAP00000012015/1-743 HPADIPAAKL GEMIETAYGE NFTCSKIAPV RHLSGNQFIL ELFHGPTGSF bmy_11038T0/1-743 HPADIPASRL GEMIETAYGE NFACSKIAPV RHLSGNQFIL ELFHGPTGSF BACU013797/1-602 HPADIPASRL GEMIETAYGE NFACSKIAPV RHLSGNQFIL ELFHGPTGSF 351 400 ENSTTRP00000009473/1-743 KDLSLQLMPH LFAHCIPPSC NYMILVATSG DTGSAVLNGF SRLSKKDKQR ENSP00000434887/1-743 KDLSLQLMPH IFAHCIPPSC NYMILVATSG DTGSAVLNGF SRLNKNDKQR ENSBTAP00000012015/1-743 KDLSLQLMPH LFAHCIPPSC NFMILVATSG DTGSAVLNGF SRLNKNDKQR bmy_11038T0/1-743 KDLSLQLMPH LFAHCIPLSC NYMILVATSG DTGSAVLNGF SRLSKNDKQR BACU013797/1-602 KDLSLQLMPH LFAHCIPPSC NYMILVATSG DTGSAVLNGF SHLSKNDKQR 401 450 ENSTTRP00000009473/1-743 IAVATFFPED GVSDFQKAQI IGSQNENGWA VGVKSDFDFC QTSIKRIFQD ENSP00000434887/1-743 IAVVAFFPEN GVSDFQKAQI IGSQRENGWA VGVESDFDFC QTAIKRIFND ENSBTAP00000012015/1-743 IAVATFFPED GVSDFQKAQI IGSQNENGWA VGVKSDFDFC QTSIKRIFQD bmy_11038T0/1-743 IAVATFFPED GVSDFQKAQI IGSQNENGWA VGVKSDFDFC QTSIKRIFQD BACU013797/1-602 IAAAAFFPED GVSDFQKAQI IGSQNENGWA VGVKSDFDFC QTSIKRIFQD 451 500 ENSTTRP00000009473/1-743 SDFTGFLTVE YGTVLSSANS INWGRLLPQV VYHASAYLDL VSQGFISFGS ENSP00000434887/1-743 SDFTGFLTVE YGTILSSANS INWGRLLPQV VYHASAYLDL VSQGFISFGS ENSBTAP00000012015/1-743 SDFTGFLAVE YGTVLSSANS INWGRLLPQV VYHASAYLDL VSQGFISFGS bmy_11038T0/1-743 SDFTGFLTVE YGTVLSSANS INWGRLLPQV VYHASAYLDL VSQGFISFGS BACU013797/1-602 SDFTGFLTVE YGTVLSSANS INWGRLLPQV VYHASAYLDL VSQGFISFGS 501 550 ENSTTRP00000009473/1-743 PVDVCIPTGN FGNILAAVYA KTMGIPIRKF ICASNQNHVL TDFIKTGHYD ENSP00000434887/1-743 PVDVCIPTGN FGNILAAVYA KMMGIPIRKF ICASNQNHVL TDFIKTGHYD ENSBTAP00000012015/1-743 PVDVCIPTGN FGNILAAVYA KTMGVPIRKF ICASNQNHVL TDFIKTGHYD bmy_11038T0/1-743 PVDVCIPTGN FGNILAAVYA KTMGIPIRKF ICASNQNHVL TDFIKTGHYD BACU013797/1-602 PVDVCIPTGN FGNILAAVYA KTMGIPIRKF ICASNQNHVL TDFIKTGHYD 551 600 ENSTTRP00000009473/1-743 LRERKLAQTF SPAIDILKSS NLERHLHLMA NKDGQLMTRL FNQLEEQHHF ENSP00000434887/1-743 LRERKLAQTF SPSIDILKSS NLERHLHLMA NKDGQLMTEL FNRLESQHHF ENSBTAP00000012015/1-743 IRERKLARTF SPAIDILKSS NLERHLHLMA NKDGQLMRRL FNQLEEEHHF bmy_11038T0/1-743 LRERKLAQTF SPAIDILKSS NLERHLHLMA NKDGQLMTRL FNQLEEQHHF BACU013797/1-602 LRERKLAQTF SPAIDILKSS NLERHLHLMA NKDGQLMTRL FNQLEEQHHF 601 650 ENSTTRP00000009473/1-743 QIEKILVEKI QQDFVADWCS EGECLAAIHS TYNTSGYILD PHTAVAKVVA ENSP00000434887/1-743 QIEKALVEKL QQDFVADWCS EGECLAAINS TYNTSGYILD PHTAVAKVVA ENSBTAP00000012015/1-743 QIEKILVEKL QQDFVADWCS EGECLAAIHS TYNTSGYILD PHTAIAKVVA bmy_11038T0/1-743 QIEKILVEKV QQDFVADWCS EEECLAAIHS TYNTSGYILD PHTAVAKVVA BACU013797/1-602 QI-------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000009473/1-743 DRMQDKTCPV IVSSTAHYSK FAPAIMQALK IKEISQTSSS QVYLLSSYNA ENSP00000434887/1-743 DRVQDKTCPV IISSTAHYSK FAPAIMQALK IKEINETSSS QLYLLGSYNA ENSBTAP00000012015/1-743 DRMQDKTCPV IVSSTAHYSK FAPAIMQALK IREINQTSSS QVYLLSSYNA bmy_11038T0/1-743 DRMQDKTCPV IVSSTAHYSK FAPAIMQALK IKEISQTSSS QVYLLSSYNA BACU013797/1-602 ---------- ---------- ---------- ---------- ---------- 701 750 ENSTTRP00000009473/1-743 LPPPHEALLE RTKQQEKMGC QVCAADVNVL KSHVEKLAQN HFI ENSP00000434887/1-743 LPPLHEALLE RTKQQEKMEY QVCAADMNVL KSHVEQLVQN QFI ENSBTAP00000012015/1-743 LPPPHEALLE RTKQQEKMEH QVCVADVNVL KNYVEKLAQN QFI bmy_11038T0/1-743 LPPPHEALLE RTKQQEKMEC QVCAADVNVL KSHVEKLVQN HFI BACU013797/1-602 ---------- ---------- ---------- ---------- ---