KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:45:27 2014  Check: 00 ..

 Name: bmy_14216T0/1-173         Len:    242  Check:  4746  Weight:  1.00
 Name: ENSBTAP00000012025/1-227  Len:    242  Check:  9807  Weight:  1.00
 Name: ENSP00000322142/1-240     Len:    242  Check:  4929  Weight:  1.00
 Name: ENSTTRP00000016384/1-147  Len:    242  Check:  4451  Weight:  1.00

//


                          1                                                   50
bmy_14216T0/1-173         MATAMYLEHY LDSIENLPCE LQRNFQLMRE LDQRTEDKKA EIDILAAEYI 
ENSBTAP00000012025/1-227  ---------- ---IENLPCE LQRNFQLMRE LDQRTEDKKA EIDILAAEYI 
ENSP00000322142/1-240     MATAMYLEHY LDSIENLPCE LQRNFQLMRE LDQRTEDKKA EIDILAAEYI 
ENSTTRP00000016384/1-147  ---------- ---IENLPCE LQRNFQLMRE LDQRTEDKKA EIDILAAEYI 


                          51                                                 100
bmy_14216T0/1-173         STVKTLSADQ RVEHLQKIQS AYSKCREYSD DKVQLAMQTY EMVDKHIRRL 
ENSBTAP00000012025/1-227  STVKTLSSDQ RVEHLQKIQS AYNKCKEYSD DKVQLAMQTY EMVDKHIRRL 
ENSP00000322142/1-240     STVKTLSPDQ RVERLQKIQN AYSKCKEYSD DKVQLAMQTY EMVDKHIRRL 
ENSTTRP00000016384/1-147  STVKTLSPGQ RVEHLQRIQS AYSKCREYSD DKVQLAMQTY EMVDKHIRRL 


                          101                                                150
bmy_14216T0/1-173         DADLARFEAD LKDKMEGSDF ESSGGRGLKS KSKVEVRKKR GAPGVVAGGP 
ENSBTAP00000012025/1-227  DADLARFEAD LKDKLEGSDF ESAGGRGLKK GR--GQKEKR GSRGRGRRTS 
ENSP00000322142/1-240     DADLARFEAD LKDKMEGSDF ESSGGRGLKK GR--GQKEKR GSRGRGRRTS 
ENSTTRP00000016384/1-147  DADLARFEAD LKDKMEGSDF ESSGGRGLKK GR--GQKEKR GSRGRGRRTS 


                          151                                                200
bmy_14216T0/1-173         QKKTPQRRRS IK-------- ---------- ---------- ---------- 
ENSBTAP00000012025/1-227  EDDTPKKKKH KGGSEFTDTI LSVHPSDVLD MPVDPNEPTY CLCHQVSYGE 
ENSP00000322142/1-240     EEDTPKKKKH KGGSEFTDTI LSVHPSDVLD MPVDPNEPTY CLCHQVSYGE 
ENSTTRP00000016384/1-147  EEDTPKKKKH KG-------- ---------- ---------- ---------- 


                          201                                                250
bmy_14216T0/1-173         ----EGERCF FSLFP----- ---------- ---------- -- 
ENSBTAP00000012025/1-227  MIGCDNPDCP IEWFHFACVD LTTKPKGKWF CPRCVQERRK KK 
ENSP00000322142/1-240     MIGCDNPDCP IEWFHFACVD LTTKPKGKWF CPRCVQEKRK KK 
ENSTTRP00000016384/1-147  ---------- ---------- ---------- ---------- --