KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:45:28 2014 Check: 00 .. Name: ENSP00000410943/1-414 Len: 469 Check: 2661 Weight: 1.00 Name: ENSBTAP00000012028/1-414 Len: 469 Check: 4300 Weight: 1.00 Name: bmy_06854T0/1-467 Len: 469 Check: 361 Weight: 1.00 Name: BACU014236/1-462 Len: 469 Check: 664 Weight: 1.00 // 1 50 ENSP00000410943/1-414 ---------- ---------- ---------- ---------- --------MS ENSBTAP00000012028/1-414 ---------- ---------- ---------- ---------- --------MS bmy_06854T0/1-467 MLRRYRLNVT GCHSSIPQSG KEGWCEGRSA ASAEDNGRSP PAGLTSTKMS BACU014236/1-462 MLRRYRLNVT GCHSSIPQNG KVGWCEGRSA ASAEDNGRSP PAGLTSTKMS 51 100 ENSP00000410943/1-414 GLDGGNKLPL AQTGGLAAPD HASGDPDRDQ CQGLREETEA TQVMANTGGG ENSBTAP00000012028/1-414 GLDEGDSLPV AKTCGPATPD HAPGHPDFKQ CQS--EETEA TSVMADTGEG bmy_06854T0/1-467 GLDEGDNLPV AKTCGPATPD HAPGHPDLKQ CQG--EETGA TLVMADTGEG BACU014236/1-462 SLDEGDNVPV AKTCGLATAD HAPGHPDLKQ CQG--EETGA TLVMADTGEG 101 150 ENSP00000410943/1-414 SLETVAEGGA SQDPVDCGPA -----LRVPV AGSRGGAATK AGQEDAPPST ENSBTAP00000012028/1-414 GLETAAEGGA AQDPAVCGLA -----LRIRV AGSRGRVATK AGQKEAPAST bmy_06854T0/1-467 GLETAAEGGA PRDPAGCGLA LRIRXLRIRV AGSRGRIATK AGQKETPAST BACU014236/1-462 GLETAAEGGA LRDPAGCGLA -----LRIRV AGSRGRVATK ASQKEAPAST 151 200 ENSP00000410943/1-414 KGLEAASAAE --AADSSQKN GCQLGEPRGP AGQKALEACG AGGLGSQMIP ENSBTAP00000012028/1-414 EGLEAASAST SVGADNSQEN GCQRRELRSP AIEKALEACD AGSLAAQMLP bmy_06854T0/1-467 EGLEAASAST SVAADNSQEN GCQRRELRSP AVEKALEACG AGRLGSQMMP BACU014236/1-462 EGLEAASAST SVAADNSQEN GCQRRELRSP AVEKALEACG AGRLGSQMMP 201 250 ENSP00000410943/1-414 GKKAKEVTTK KRAISAAVEK EGEAGAAMEE KKVVQKEKKV AGGVKEETRP ENSBTAP00000012028/1-414 RAKAKEMTTK KCAVSAAGEK EGVTEEVVEG KKVIQKEKKV VGGAKEETRA bmy_06854T0/1-467 GAKAKEMTTK KCAVSAAAEK EGVAEAVVEE KKVMQKEKKV VGGAKEEARA BACU014236/1-462 GAKAKEMTTK KCAVSTAAEK EGVAEAVVEE KKVMQKEKKV VGGAKEEARA 251 300 ENSP00000410943/1-414 RAPKINNCMD SLEAIDQELS NVNAQADRAF LQLERKFGRM RRLHMQRRSF ENSBTAP00000012028/1-414 RAPKINNCMD SLEAIDQELS NVNAQADRAF LQLERKFGRM RRLHMQRRSF bmy_06854T0/1-467 RAPKINNCMD SLEAIDQELS NVNAQADRAF LQLERKFGRM RRLHMQRRSF BACU014236/1-462 RAPKINNCMD SLEAIDQELS NVNAQADRAF LQLERKFGRM RRLHMQRRSF 301 350 ENSP00000410943/1-414 IIQNIPGFWV TAFRNHPQLS PMISGQDEDM LRYMINLEVE ELKHPRAGCK ENSBTAP00000012028/1-414 IIQNIPGFWV TAFRNHPQLS PMISGQDEDM MRYMINLEVE ELKHPRAGCK bmy_06854T0/1-467 IIQNIPGFWV TAFRNHPQLS PMISGQDEDM MRYMINLEVE ELKHPRAGCK BACU014236/1-462 IIQNIPGFWV TAFRNHPQLS PMISGQDEDM MRYMINLEVE ELKHPRAGCK 351 400 ENSP00000410943/1-414 FKFIFQGNPY FRNEGLVKEY ERRSSGRVVS LSTPIRWHRG QDPQAHIHRN ENSBTAP00000012028/1-414 FKFIFQSNPY FRNEGLVKEY ERRSSGRVVS LSTPIRWHRG QDPQSHIHRN bmy_06854T0/1-467 FKFIFQSNPY FRNEGLVKEY ERRSSGRVVS LSTPIRWHRG QDPQSHIHRN BACU014236/1-462 FKFIFQSNPY FRNEGLVKEY ERRSSGRVVS LSTPIRWHRG QDPQSHIHRN 401 450 ENSP00000410943/1-414 REGNTIPSFF NWFSDHSLLE FDRIAEIIKG ELWPNPLQYY LMGEGPRRGI ENSBTAP00000012028/1-414 REGNTIPSFF NWFSDHSLLE FDRIAEIIKA ELWPNPLQYY LMGDGPRRGF bmy_06854T0/1-467 REGNTIPSFF NWFSDHSLLE FDRIAEIIKA ELWPNPLQYY LMGDGPRRGF BACU014236/1-462 REGNTIPSFF NWFSDHSLLE FDRIAEIIKA ELWPNPLQYY LMGDGPRRGF 451 500 ENSP00000410943/1-414 RGPPRQPVES ARSFRFQSG ENSBTAP00000012028/1-414 RDPARQPVES SRTFRFQSG bmy_06854T0/1-467 RDPARQPVES SRTFRFQSG BACU014236/1-462 RDPARQPVES SRTFRFQSG