KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:28 2014 Check: 00 .. Name: bmy_03752T0/1-1306 Len: 1324 Check: 6727 Weight: 1.00 Name: BACU010869/1-1159 Len: 1324 Check: 6676 Weight: 1.00 Name: ENSP00000218089/1-1268 Len: 1324 Check: 2838 Weight: 1.00 Name: ENSTTRP00000001869/1-1268 Len: 1324 Check: 2988 Weight: 1.00 Name: ENSBTAP00000012029/1-1271 Len: 1324 Check: 9498 Weight: 1.00 // 1 50 bmy_03752T0/1-1306 MSSQQQLLRQ TGEVADLELD SLYMSTVSED DKEMIAAPEI PTDFNLLQKE BACU010869/1-1159 ---------- ---------- ---------- ---------- ---------- ENSP00000218089/1-1268 ---------- ---------- ---------- ---MIAAPEI PTDFNLLQ-- ENSTTRP00000001869/1-1268 ---------- ---------- ---------- ---MIAAPEI PTDFNLLQ-- ENSBTAP00000012029/1-1271 ---------- ---------- ---------- ---MIAAPEI PTDFNLLQ-- 51 100 bmy_03752T0/1-1306 FELLYAVVVF ILSSSFMRES ETHFSSDTDF EDIEGKNQKQ GKGKTCKKGK BACU010869/1-1159 ---------- ---------- ---------- ---------- ---------- ENSP00000218089/1-1268 ---------- --------ES ETHFSSDTDF EDIEGKNQKQ GKGKTCKKGK ENSTTRP00000001869/1-1268 ---------- --------ES ETHFSSDTDF EDIEGKNQKQ GKGKTCKKGK ENSBTAP00000012029/1-1271 ---------- --------ES ETHFSSDTDF EDIEGKNQKQ GKGKTCKKGK 101 150 bmy_03752T0/1-1306 KGPGEKGKGG NGGGKPPSGP NRMNGHHQQN GVENMMLFEV VKMGKSAMQS BACU010869/1-1159 ---------- ---------- --MNGHHQQN GVENMMLFEV VKMGKSAMQS ENSP00000218089/1-1268 KGPAEKGKGG NGGGKPPSGP NRMNGHHQQN GVENMMLFEV VKMGKSAMQS ENSTTRP00000001869/1-1268 KGPGEKGKGG NGGGKPPSGP NRMNGHHQQN GVENMMLFEV VKMGKSAMQS ENSBTAP00000012029/1-1271 KGPGEKGKGG NGGGKPPSGP NRMNGHHQQN GVENMMLFEV VKMGKSAMQS 151 200 bmy_03752T0/1-1306 VVDDWIESYK HDRDIALLDL INFFIQCSGC KGVVTAEMFR HMQNSEIIRK BACU010869/1-1159 LVDDWIESYK HDRDIALLDL INFFIQCSGC KGVVTAEMFR HMQNSEIIRK ENSP00000218089/1-1268 VVDDWIESYK HDRDIALLDL INFFIQCSGC KGVVTAEMFR HMQNSEIIRK ENSTTRP00000001869/1-1268 VVDDWIESYK HDRDIALLDL INFFIQCSGC KGVVTAEMFR HMQNSEIIRK ENSBTAP00000012029/1-1271 VVDDWIESYK HDRDIALLDL INFFIQCSGC KGVVTAEMFR HMQNSEIIRK 201 250 bmy_03752T0/1-1306 MTEEFDEDSG DYPLTMAGPQ WKKFKSSFCE FIGVLVRQCQ YSIIYDEYMM BACU010869/1-1159 MTEEFDEDSG DYPLTMAGPQ WKKFKSSFCE FIGVLVRQCQ YSIIYDEYMM ENSP00000218089/1-1268 MTEEFDEDSG DYPLTMAGPQ WKKFKSSFCE FIGVLVRQCQ YSIIYDEYMM ENSTTRP00000001869/1-1268 MTEEFDEDSG DYPLTMAGPQ WKKFKSSFCE FIGVLVRQCQ YSIIYDEYMM ENSBTAP00000012029/1-1271 MTEEFDEDSG DYPLTMAGPQ WKKFKSSFCE FIGVLVRQCQ YSIIYDEYMM 251 300 bmy_03752T0/1-1306 DTVISLLTGL SDSQVRAFRH TSTLA--AMK LMTALVNVAL NLSINMDNTQ BACU010869/1-1159 DTVISLLTGL SDSQVRAFRH TSTLA--AMK LMTALVNVAL NLSINMDNTQ ENSP00000218089/1-1268 DTVISLLTGL SDSQVRAFRH TSTLA--AMK LMTALVNVAL NLSINMDNTQ ENSTTRP00000001869/1-1268 DTVISLLTGL SDSQVRAFRH TSTLA--AMK LMTALVNVAL NLSINMDNTQ ENSBTAP00000012029/1-1271 DTVISLLTGL SDSQVRAFRH TSTLAEIAMK LMTALVNVAL NLSINMDNTQ 301 350 bmy_03752T0/1-1306 RQYEAERNKM IGKRANERLE LLLQKRKELQ ENQDEIENMM NAIFKGVFVH BACU010869/1-1159 RQYEAERNKM IGKRANERLE LLLQKRKELQ ENQDEIENMM NAIFKGVFVH ENSP00000218089/1-1268 RQYEAERNKM IGKRANERLE LLLQKRKELQ ENQDEIENMM NAIFKGVFVH ENSTTRP00000001869/1-1268 RQYEAERNKM IGKRANERLE LLLQKRKELQ ENQDEIENMM NAIFKGVFVH ENSBTAP00000012029/1-1271 RQYEAERNKM IGKRANERLE LLLQKRKELQ ENQDEIENMM NAIFKGVFVH 351 400 bmy_03752T0/1-1306 RYRDAIAEIR AICIEEIGIW MKMYSDAFLN DSYLKYVGWT MHDKQGEVRL BACU010869/1-1159 RYRDAIAEIR AICIEEIGIW MKMYSDAFLN DSYLKYVGWT MHDKQGEVRL ENSP00000218089/1-1268 RYRDAIAEIR AICIEEIGIW MKMYSDAFLN DSYLKYVGWT MHDKQGEVRL ENSTTRP00000001869/1-1268 RYRDAIAEIR AICIEEIGIW MKMYSDAFLN DSYLKYVGWT MHDKQGEVRL ENSBTAP00000012029/1-1271 RYRDAIAEIR AICIEEIGIW MKMYSDAFLN DSYLKYVGWT MHDKQGEVRL 401 450 bmy_03752T0/1-1306 KCLTALQGLY YNKELNSKLE LFTSRFK--- ILLGL----- -------FCS BACU010869/1-1159 KCLTALQGLY YNKELNSKLE LFTSRFKDRI VSMTLDKEYD VAVQAIKLLT ENSP00000218089/1-1268 KCLTALQGLY YNKELNSKLE LFTSRFKDRI VSMTLDKEYD VAVQAIKLLT ENSTTRP00000001869/1-1268 KCLTALQGLY YNKELNSKLE LFTSRFKDRI VSMTLDKEYD VAVQAIKLLT ENSBTAP00000012029/1-1271 KCLTALQGLY YNKELNSKLE LFTSRFKDRI VSMTLDKEYD VAVQAIKLLT 451 500 bmy_03752T0/1-1306 FKIRSSEEVL TAEDCENVYH LVYSAHRPVA VAAGEFLYKK LFSRRDPEED BACU010869/1-1159 LVLQSSEEVL TAEDCENVYH LVYSAHRPVA VAAGEFLYKK LFSRRDPEED ENSP00000218089/1-1268 LVLQSSEEVL TAEDCENVYH LVYSAHRPVA VAAGEFLYKK LFSRRDPEED ENSTTRP00000001869/1-1268 LVLQSSEEVL TAEDCENVYH LVYSAHRPVA VAAGEFLYKK LFSRRDPEED ENSBTAP00000012029/1-1271 LVLQSSEEVL TAEDCENVYH LVYSAHRPVA VAAGEFLYKK LFSRRDPEED 501 550 bmy_03752T0/1-1306 GMMKRRGRQG PNANLVKTLV FFFLESE-LH EHAAYLVDSM WDCATELLKD BACU010869/1-1159 GMMKRRGRQG PNANLVKTLV FFFLESE-LH EHAAYLVDSM WDCATELLKD ENSP00000218089/1-1268 GMMKRRGRQG PNANLVKTLV FFFLESE-LH EHAAYLVDSM WDCATELLKD ENSTTRP00000001869/1-1268 GMMKRRGRQG PNANLVKTLV FFFLESE-LH EHAAYLVDSM WDCATELLKD ENSBTAP00000012029/1-1271 GMMKRRGRQG PNANLVKTLV FSFWKSELLH EHAAYLVDSM WDCATELLKD 551 600 bmy_03752T0/1-1306 WECMNSLLLE EPLSGEEALT DRQESALIEI MLCTIRQAAE CHPPVGRGTG BACU010869/1-1159 WECMNSLLLE EPLSGEEALT DRQESALIEI MLCTIRQAAE CHPPVGRGTG ENSP00000218089/1-1268 WECMNSLLLE EPLSGEEALT DRQESALIEI MLCTIRQAAE CHPPVGRGTG ENSTTRP00000001869/1-1268 WECMNSLLLE EPLSGEEALT DRQESALIEI MLCTIRQAAE CHPPVGRGTG ENSBTAP00000012029/1-1271 WECMNSLLLE EPLSGEEALT DRQESALIEI MLCTIRQAAE CHPPVGRGTG 601 650 bmy_03752T0/1-1306 KRVLTAKEKK TQLDDRTKIT ELFAVALPQL LAKYSVDAEK VTNLLQLPQY BACU010869/1-1159 KRVLTAKEKK TQLDDRTKIT ELFAVALPQL LAKYSVDAEK VTNLLQLPQY ENSP00000218089/1-1268 KRVLTAKEKK TQLDDRTKIT ELFAVALPQL LAKYSVDAEK VTNLLQLPQY ENSTTRP00000001869/1-1268 KRVLTAKEKK TQLDDRTKIT ELFAVALPQL LAKYSVDAEK VTNLLQLPQY ENSBTAP00000012029/1-1271 KRVLTAKEKK TQLDDRTKIT ELFAVALPQL LAKYSIDAEK VTNLLQLPQY 651 700 bmy_03752T0/1-1306 FDLEIYTTGR LEKHLDALLR QIRNIVEKHT DTDVLEACSK TYHALCNEEF BACU010869/1-1159 FDLEIYTTGR LEKHLDALLR QIRNIVEKHT DTDVLEACSK TYHALCNEEF ENSP00000218089/1-1268 FDLEIYTTGR LEKHLDALLR QIRNIVEKHT DTDVLEACSK TYHALCNEEF ENSTTRP00000001869/1-1268 FDLEIYTTGR LEKHLDALLR QIRNIVEKHT DTDVLEACSK TYHALCNEEF ENSBTAP00000012029/1-1271 FDLEIYTTGR LEKHLDALLR QIRNIVEKHT DTDVLEACSK TYHALCNEEF 701 750 bmy_03752T0/1-1306 TIFNRVDISR SQLIDELADK FNRLLEDFLQ EGEEPDEDDA YQVLSTLKRI BACU010869/1-1159 TIFNRVDISR SQLIDELADK FNRLLEDFLQ EGEEPDEDDA YQVLSTLKRI ENSP00000218089/1-1268 TIFNRVDISR SQLIDELADK FNRLLEDFLQ EGEEPDEDDA YQVLSTLKRI ENSTTRP00000001869/1-1268 TIFNRVDISR SQLIDELADK FNRLLEDFLQ EGEEPDEDDA YQVLSTLKRI ENSBTAP00000012029/1-1271 TIFNRVDISR SQLIDELADK FNRLLEDFLQ EGEEPDEDDA YQVLSTLKRI 751 800 bmy_03752T0/1-1306 TAFHNAHDLS KWDLFACNYK LLKTGIENGD MPEQIVIHAL QCTHYVILWQ BACU010869/1-1159 TAFHNAHDLS KWDLFACNYK LLKTGIENGD MPEQIVIHAL QCTHYVILWQ ENSP00000218089/1-1268 TAFHNAHDLS KWDLFACNYK LLKTGIENGD MPEQIVIHAL QCTHYVILWQ ENSTTRP00000001869/1-1268 TAFHNAHDLS KWDLFACNYK LLKTGIENGD MPEQIVIHAL QCTHYVILWQ ENSBTAP00000012029/1-1271 TAFHNAHDLS KWDLFACNYK LLKTGIENGD MPEQIVIHAL QCTHYVILWQ 801 850 bmy_03752T0/1-1306 LAKITESSST KEDLLRLKKQ MRVFCQICQH YLTNVNTTVK EQAFTILCDI BACU010869/1-1159 LAKITESSST KEDLLRLKKQ MRVFCQICQH YLTNVNTTVK EQAFTILCDI ENSP00000218089/1-1268 LAKITESSST KEDLLRLKKQ MRVFCQICQH YLTNVNTTVK EQAFTILCDI ENSTTRP00000001869/1-1268 LAKITESSST KEDLLRLKKQ MRVFCQICQH YLTNVNTTVK EQAFTILCDI ENSBTAP00000012029/1-1271 LAKITESSST KEDLLRLKKQ MRVFCQICQH YLTNVNTTVK EQAFTILCDI 851 900 bmy_03752T0/1-1306 LMIFSHQIMS GGRDMLEPLV YTPDSSLQSE LLSFILDHVF IEQDDDNNSA BACU010869/1-1159 LMIFSHQIMS GGRDMLEPLV YTPDSSLQSE LLSFILDHVF IEQDDDNNSA ENSP00000218089/1-1268 LMIFSHQIMS GGRDMLEPLV YTPDSSLQSE LLSFILDHVF IEQDDDNNSA ENSTTRP00000001869/1-1268 LMIFSHQIMS GGRDMLEPLV YTPDSSLQSE LLSFILDHVF IEQDDDNNSA ENSBTAP00000012029/1-1271 LMIFSHQIMS GGRDMLEPLV YTPDSSLQSE LLSFILDHVF IEQDDDNNSA 901 950 bmy_03752T0/1-1306 DGQQEDEASK IEALHKRRNL LAAFCKLIVY TVVEMNTAAD IFKQYMKYYN BACU010869/1-1159 DGHQEDEASK IEALHKRRNL LAAFCKLIVY TVVEMNTAAD IFKQYMKYYN ENSP00000218089/1-1268 DGQQEDEASK IEALHKRRNL LAAFCKLIVY TVVEMNTAAD IFKQYMKYYN ENSTTRP00000001869/1-1268 DGQQEDEASK IEALHKRRNL LAAFCKLIVY TVVEMNTAAD IFKQYMKYYN ENSBTAP00000012029/1-1271 DGQQEDEASK IEALHKRRNL LAAFCKLIVY TVVEMNTAAD IFKQYMKYYN 951 1000 bmy_03752T0/1-1306 DYGDIIKETM SKTRQIDKIQ CAKTLILSLQ QLFNEMIQEN GYNFDRSSST BACU010869/1-1159 DYGDIIKETM SKTRQIDKIQ CAKTLILSLQ QLFNEMIQEN GYNFDRSSST ENSP00000218089/1-1268 DYGDIIKETM SKTRQIDKIQ CAKTLILSLQ QLFNEMIQEN GYNFDRSSST ENSTTRP00000001869/1-1268 DYGDIIKETM SKTRQIDKIQ CAKTLILSLQ QLFNEMIQEN GYNFDRSSST ENSBTAP00000012029/1-1271 DYGDIIKETM SKTRQIDKIQ CAKTLILSLQ QLFNEMIQEN GYNFDRSSST 1001 1050 bmy_03752T0/1-1306 FSGIKELARR FALTFGLDQL KTREAIAMLH KDGIEFAFKE PNPQGESHPP BACU010869/1-1159 FSGIKELALC FALTFGLDQL KTREAIAMLH KDGIEFAFKE PNPQGESHPP ENSP00000218089/1-1268 FSGIKELARR FALTFGLDQL KTREAIAMLH KDGIEFAFKE PNPQGESHPP ENSTTRP00000001869/1-1268 FSGIKELARR FALTFGLDQL KTREAIAMLH KDGIEFAFKE PNPQGESHPP ENSBTAP00000012029/1-1271 FSGIKELARR FALTFGLDQL KTREAIAMLH KDGIEFAFKE PNPQGESHPP 1051 1100 bmy_03752T0/1-1306 LNLAFLDILS EFSSKLLRQD KRTVYVYLEK FMTFQMSLRR EDVWLPLMSY BACU010869/1-1159 LNLAFLDILS EFSSKLLRQD KRTVYVYLEK FMTFQMSLRR EDVWLPLMSY ENSP00000218089/1-1268 LNLAFLDILS EFSSKLLRQD KRTVYVYLEK FMTFQMSLRR EDVWLPLMSY ENSTTRP00000001869/1-1268 LNLAFLDILS EFSSKLLRQD KRTVYVYLEK FMTFQMSLRR EDVWLPLMSY ENSBTAP00000012029/1-1271 LNLAFLDILS EFSSKLLRQD KRTVYVYLEK FMTFQMSLRR EDVWLPLMSY 1101 1150 bmy_03752T0/1-1306 RNSLLAGGDD DTMSVISGIS SRGSTVRSKK SKPSTGKRKV VEGMQLALTE BACU010869/1-1159 RNSLLAGGDD DTMSVISGIS SRGSTVRSKK SKPSTGKRKV VEGMQLALTE ENSP00000218089/1-1268 RNSLLAGGDD DTMSVISGIS SRGSTVRSKK SKPSTGKRKV VEGMQLSLTE ENSTTRP00000001869/1-1268 RNSLLAGGDD DTMSVISGIS SRGSTVRSKK SKPSTGKRKV VEGMQLALTE ENSBTAP00000012029/1-1271 RNSLLAGGDD DTMSVISGIS SRGSTVRSKK SKPSTGKRKV VEGMQLALTE 1151 1200 bmy_03752T0/1-1306 ESSSSDSMWL SREQTLHTPV MMQTPQLTST IMREPKRLRP EDSFMSVYPM BACU010869/1-1159 ESSSSDSMWL SREQTLHTPV MMQTPQLTST IMREPKRLRP EDSFMSVYPM ENSP00000218089/1-1268 ESSSSDSMWL SREQTLHTPV MMQTPQLTST IMREPKRLRP EDSFMSVYPM ENSTTRP00000001869/1-1268 ESSSSDSMWL SREQTLHTPV MMQTPQLTST IMREPKRLRP EDSFMSVYPM ENSBTAP00000012029/1-1271 ESSSSDSMWL SREQTLHTPV MMQTPQLTST IMREPKRLRP EDSFMSVYPM 1201 1250 bmy_03752T0/1-1306 QTEHHQTPLD YNTQVTWMLA QRQQEEARQQ QERAAMSYVK LRTNLQHAIR BACU010869/1-1159 QTEHHQTPLD YN-------- ---------- ---------- ---------R ENSP00000218089/1-1268 QTEHHQTPLD YNTQVTWMLA QRQQEEARQQ QERAAMSYVK LRTNLQHAIR ENSTTRP00000001869/1-1268 QTEHHQTPLD YNTQVTWMLA QRQQEEARQQ QERAAMSYVK LRTNLQHAIR ENSBTAP00000012029/1-1271 QTEHHQTPLD YNTQVTWMLA QRQQEEARQQ QERAAMSYVK LRTNLQHAIR 1251 1300 bmy_03752T0/1-1306 RGTSLMEDDE EPIVEDVMMS SEGRIEDLNE GMDFDTMDID LPPSKNRRER BACU010869/1-1159 RGTSLMEDDE EPIVEDVMMS SEGRIEDLNE GMDFDTMDID LPPSKNRRER ENSP00000218089/1-1268 RGTSLMEDDE EPIVEDVMMS SEGRIEDLNE GMDFDTMDID LPPSKNRRER ENSTTRP00000001869/1-1268 RGTSLMEDDE EPIVEDVMMS SEGRIEDLNE GMDFDTMDID LPPSKNRRER ENSBTAP00000012029/1-1271 RGTSLMEDDE EPIVEDVMMS SEGRIEDLNE GMDFDTMDID LPPSKNRRER 1301 1350 bmy_03752T0/1-1306 TELKPDFFDP ASIMDESVLG VSMF BACU010869/1-1159 TELKPDFFDP ASIMDES--- VGLI ENSP00000218089/1-1268 TELKPDFFDP ASIMDESVLG VSMF ENSTTRP00000001869/1-1268 TELKPDFFDP ASIMDESVLG VSMF ENSBTAP00000012029/1-1271 TELKPDFFDP ASIMDESVLG VSMF