KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:45:30 2014 Check: 00 .. Name: ENSBTAP00000012033/1-348 Len: 348 Check: 2128 Weight: 1.00 Name: BACU000067/1-222 Len: 348 Check: 7961 Weight: 1.00 Name: bmy_09452T0/1-262 Len: 348 Check: 8800 Weight: 1.00 Name: ENSTTRP00000001550/1-317 Len: 348 Check: 7690 Weight: 1.00 // 1 50 ENSBTAP00000012033/1-348 MSCQPFTSTD TFIPLNSESS ATLPLIMHPS AAECLPVSNH ATNVMSTVPS BACU000067/1-222 ---------- ---------- ---------- ---------- ---------- bmy_09452T0/1-262 MSCQPFTSAD TFIPLNSESS ATLPLIMHHS AAECLPVSNH ATNVMSTVPS ENSTTRP00000001550/1-317 MSCQPFTSAD TFIPLNSESS ATLPLIMHHS AAECLPVSNH ATNVMSTVPS 51 100 ENSBTAP00000012033/1-348 ILSLIQTPKC LCTCFVVTML GNTATGLHYS VPSCHYGNQS STYGVMADSE BACU000067/1-222 ---------- ---------- ---------- ---------- -----MA--- bmy_09452T0/1-262 ILSLIQTPKC LCTYFLVTTL GTTATGLHYS VPSCHYGNQS STYGVMA--- ENSTTRP00000001550/1-317 ILSLIQTPKC LCTYFLVTTL GNTATGLHYS VPSCHYGNQS STYGVMA--- 101 150 ENSBTAP00000012033/1-348 QLGESWKTNL MSCVPCPPSC VNWANQLHGS LTPCLYKFPD HTLSHGFPPM BACU000067/1-222 ---------- ---------- --------GS LAPCLYKFPD HTLSHGFPPM bmy_09452T0/1-262 ---------- ---------- --------GS LAPCLYKFPD HTLSHGFPPM ENSTTRP00000001550/1-317 ---------- ---------- --------GS LAPCLYKFPD HTLSHGFPPM 151 200 ENSBTAP00000012033/1-348 HQPLLSEDPT AADFKQELRR KSKLVEEPID MDSPEIRELE KFANEFKVRR BACU000067/1-222 HQPLLAEDLT AADFKQELRR KSKLAEEPID MDSPEIRELE KFANEFKVRR bmy_09452T0/1-262 HQPLLAEDLT AADFKQELRR KSKLAEEPID MDSPEIRELE KFANEFKVRR ENSTTRP00000001550/1-317 HQPLLAEDLT AADFKQELRR KSKLAEEPID MDSPEIRELE KFANEFKVRR 201 250 ENSBTAP00000012033/1-348 IKLGYTQTNV GEALAAVHGS EFSQTTICRF ENLQLSFKNA CKLKAILSKW BACU000067/1-222 IKLGYTQTNV GEALAAVHGS EFSQTTICRF ENLQLSFKNA CKLKAILSKW bmy_09452T0/1-262 IKL------- ---------- ---------- ---------- ---------- ENSTTRP00000001550/1-317 IKLGYTQTNV GEALAAVHGS EFSQTTICRF ENLQLSFKNA CKLKAILSKW 251 300 ENSBTAP00000012033/1-348 LEEAEQVGAL YNEKVGANER KRKRRTTISI AAKDALERHF GEQNKPSSQE BACU000067/1-222 LEEAEQVGAL YNEKVGANER KRKRRTTISI AAKDALERHF GEQNKPSSQE bmy_09452T0/1-262 --------AL YNEKVGANER KRKRRTTISI AAKDALERHF GEQNKPSSQE ENSTTRP00000001550/1-317 LEEAEQVGAL YNEKVGANER KRKRRTTISI AAKDALERHF GEQNKPSSQE 301 350 ENSBTAP00000012033/1-348 ILRMAEELNL EKEVVRVWFC NRRQREKRVK TSLNQSLFTI SKEHLECR BACU000067/1-222 ILRMAEELNL EKEVVRVWFC NRRQREKRVK TSLNQSLFTI SKEHLECR bmy_09452T0/1-262 ILRMAEELNL EKEVVRVWFC NRRQREKRVK TSLNQSLFTI SKEHLECR ENSTTRP00000001550/1-317 ILRMAEELNL EKEVVRVWFC NRRQREKRVK TSLNQSLFTI SKEHLECR