KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:45:31 2014  Check: 00 ..

 Name: ENSP00000354753/1-306     Len:    335  Check:  4235  Weight:  1.00
 Name: ENSBTAP00000012044/1-305  Len:    335  Check:  7189  Weight:  1.00
 Name: bmy_02428T0/1-256         Len:    335  Check:  8720  Weight:  1.00
 Name: ENSTTRP00000007025/1-324  Len:    335  Check:  5338  Weight:  1.00

//


                          1                                                   50
ENSP00000354753/1-306     ---------- ---------- ---MPEAGFQ ATNAFTECKF TCTSGKCLYL 
ENSBTAP00000012044/1-305  ---------- ---------- ---MQEAGSQ ATNAFTECKF TCTSGQCLYL 
bmy_02428T0/1-256         ---------- ---------- -MSTEPLG-- -NGTLKEAPF ---------- 
ENSTTRP00000007025/1-324  DGGDLRPPGP RDSQVGTQAP GSSMQEAGFQ ATNAFTECKF -CTSGQC--Y 


                          51                                                 100
ENSP00000354753/1-306     GSLVCNQQND CGDNSDEENC LLVTEHPPPG IFNSELEFAQ IIIIVVVVTV 
ENSBTAP00000012044/1-305  GSLVCNQQND CGDNSDEENC LLVTEHPPPG IFSSELEFAQ VVVVVVVVTV 
bmy_02428T0/1-256         KNLVLKK--- ---------- ---------- ---AELEFAQ VVVVVVVVTV 
ENSTTRP00000007025/1-324  GSLVCNQQND CGDNSDEENC LLVTEHPPPG IFSSELEFAQ VVVVVVVVTV 


                          101                                                150
ENSP00000354753/1-306     MVVVIVCLLN HYKVSTRSFI NRPNQSRRRE DGLPQEGCLW PSDSAAPRLG 
ENSBTAP00000012044/1-305  MVVVIFCLLN HYRVSTRSFI HRPGQGQRQE DRPQLEGCLW PSDGSEPR-P 
bmy_02428T0/1-256         MVVVVVCLLN HYRVSTRSFI HHPGQGRRQ- DGPQP----- ---------- 
ENSTTRP00000007025/1-324  MVVVVVCLLN HYRVSTRSFI HHPGQGRRQ- DRPQPXXXXX XXXXXXXXXX 


                          151                                                200
ENSP00000354753/1-306     ASEIMHAPRS RDRFTAPSFI QRDRFSRFQP TYPYVQHEID LPPTISLSDG 
ENSBTAP00000012044/1-305  TSETMYAPRC RDGVTAPPFL QRDRFSRFQP TYPYVQHEID LPPTISLSDG 
bmy_02428T0/1-256         ---IMYAPRS RDGGTAPTFL QRDRFSRFQP TYPYVQHEID LPPTISLSDG 
ENSTTRP00000007025/1-324  XXXIMYAPRS RNGGTAPTFL QRDRFSRFQP TYPYVQHEID LPPTISLSDG 


                          201                                                250
ENSP00000354753/1-306     EEPPPYQGPC TLQLRDPEQQ MELNRESVRA PPNRTIFDSD LIDIAMYSGG 
ENSBTAP00000012044/1-305  EEPPPYQGPC TLQLRDPEQQ MELNRESVRA PPNRTVFDSD LIGVSVYSGG 
bmy_02428T0/1-256         EEPPPYQGPC TLQLRDPEQQ MELNRESVRA PPNRTIFDSD LIDVSVYSGG 
ENSTTRP00000007025/1-324  EEPPPYQGPC TLQLRDPEQQ MELNRESVRA PPNRTIFDSD LIDVSVYSGG 


                          251                                                300
ENSP00000354753/1-306     PCPPSSNSGI SASTCSSNGR MEGPPPTYSE VMGHHPGASF LHHQRSNAHR 
ENSBTAP00000012044/1-305  PCPPSSNSGI SASTCSSTGR MAGPPPAYSE AMGHYPAATP SHPQHSSAHR 
bmy_02428T0/1-256         PRPPSSNSGI SASTCSSNRR MEGPPPAYSE VMGHCLGATL FHPQHSSTHR 
ENSTTRP00000007025/1-324  PRPPSSNSGI SASTCSSNRR MEGPPPAYSE VMGHCLGATL FHPQHST-HR 


                          301                                                350
ENSP00000354753/1-306     GSRLQFQQNN AESTIV--PI KGKDRKPGNL V---- 
ENSBTAP00000012044/1-305  GSRLLLQREG PGARSC--PT RARTGNPGSA S---- 
bmy_02428T0/1-256         GGRLPLQRDG PGGHRAARPG QGQEAREPRL TCVHT 
ENSTTRP00000007025/1-324  GSRLPLQRDG PGGTKL--PV QGKDRKPGNL I----