KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:33 2014 Check: 00 .. Name: ENSP00000372390/1-635 Len: 635 Check: 6840 Weight: 1.00 Name: ENSBTAP00000012050/1-629 Len: 635 Check: 8437 Weight: 1.00 Name: ENSTTRP00000008718/1-634 Len: 635 Check: 4870 Weight: 1.00 Name: bmy_14704T0/1-634 Len: 635 Check: 3144 Weight: 1.00 Name: BACU017119/1-634 Len: 635 Check: 2131 Weight: 1.00 // 1 50 ENSP00000372390/1-635 MARGLPTIAS LARLCQKLNR LKPLEDSTME TSLRRCLSTL DLTLLGVGGM ENSBTAP00000012050/1-629 MAPGRPCAAG LARFCQKLKR RKLLADSSMA TSLQRCLSAL DLTLLGVGSM ENSTTRP00000008718/1-634 MASGLPSTAG LARFCQKLKR LKPLEEATME TSLQRCLSAL DLTLLGVGAM bmy_14704T0/1-634 MASGLPSTAG LARFCQKLKR LKPLEEATME TSLQRCLSAL DLTLLGVGAM BACU017119/1-634 MASGLPSTAG LARFCQKLKR LKPLEEATME TSLQRCLSAL DLTLLGVGAM 51 100 ENSP00000372390/1-635 VGSGLYVLTG AVAKEVAGPA VLLSFGVAAV ASLLAALCYA EFGARVPRTG ENSBTAP00000012050/1-629 VGSGLYVLTG VVAKEVTGPA VTVSFVVAAV ASLMAALCYA EFGARVPRTG ENSTTRP00000008718/1-634 VGSGLYVLTG TVAKEITGPA VIVSFTVAAV ASLLAALCYA EFGARVPRTG bmy_14704T0/1-634 VGSGLYVLTG TVAKEITGPA VTVSFTVAAV ASLLAALCYA EFGARVPRTG BACU017119/1-634 VGSGLYVLTG TVAKEITGPA VIVSFTVAAV ASLLAALCYA EFGARVPRTG 101 150 ENSP00000372390/1-635 SAYLFTYVSM GELWAFLIGW NVLLEYIIGG AAVARAWSGY LDSMFSHSIR ENSBTAP00000012050/1-629 SAYLFTYVSI GELWAFLIGW NLVLEYVIAS AAVARAWSGY LDAMFDHRIQ ENSTTRP00000008718/1-634 SAYLFTYVSM GELWAFLIGW NLVLEYVIAG AAVARAWSGY LDAMFDHHIR bmy_14704T0/1-634 SAYLFTYVSM GELWAFLIGW NLVLEYVIAG AAVARAWSGY LDAMFDHHIR BACU017119/1-634 SAYLFTYVSM GELWAFLIGW NLVLEYVIAG AAVARAWSGY LDAMFDHHIR 151 200 ENSP00000372390/1-635 NFTETHVGSW QVPLLGHYPD FLAAGIILLA SAFVSCGARV SSWLNHTFSA ENSBTAP00000012050/1-629 NFTEAHLGVW QVPFLARSPD WLAAGIILLA SAFVSCGARV SSWLNHTLSA ENSTTRP00000008718/1-634 NFTEAHVGIW QVPLLARYPD FLAAGILLLA STFVSCGARV SSWLNHTLSA bmy_14704T0/1-634 NFTEAHVGIW QVPLLARYPD FLAAGILLLA STFVSCGARV SSWLNHTLSA BACU017119/1-634 NFTEAHVGIW QVPLLARYPD FLAAGILLLA STFVSCGARV SSWLNHTLSA 201 250 ENSP00000372390/1-635 ISLLVILFIV ILGFILAQPH NWSADEGGFA PFGFSGVMAG TASCFYAFVG ENSBTAP00000012050/1-629 VSMIVILFIV VLGFILARPS NWGEAEGGFA PFGFSGVMSG TATCFYAFVG ENSTTRP00000008718/1-634 ISMVVILFII ILGFVLARSH NWGKEEGGFA PFGFSGIMSG TATCFYAFVG bmy_14704T0/1-634 ISMVVILFII ILGFVLARSH NWGKEEGGFA PFGFSGIMSG TATCFYAFVG BACU017119/1-634 ISMVVILFII ILGFVLARSH NWGKEEGGFA PFGFSGIMSG TATCFYAFVG 251 300 ENSP00000372390/1-635 FDVIAASSEE AQNPRRSVPL AIAISLAIAA GAYILVSTVL TLMVPWHSLD ENSBTAP00000012050/1-629 FDVIAASSEE ARDPKRAVPL AIALSLGLAA TAYILVSAVL TLMIPWHSLN ENSTTRP00000008718/1-634 FDVIAASSEE ARNPKRAVPL AIAISLGLAA SAYILVSTVL TLMVPWHSLD bmy_14704T0/1-634 FDVIAASSEE ARNPKRAVPL AIAISLGLAA SAYILVSTVL TLMVPWHSLD BACU017119/1-634 FDVIAASSEE ARNPKRAVPL AIAISLGLAA SAYILVSTVL TLMVPWHSLD 301 350 ENSP00000372390/1-635 PDSALADAFY QRGYRWAGFI VAAGSICAMN TVLLSLLFSL PRIVYAMAAD ENSBTAP00000012050/1-629 PNSALADAFY QRGYSWAGYL VATGSICAMT TVQLSGLFCL PRIIYAMAAD ENSTTRP00000008718/1-634 PNSALADAFY QRGYSWAGYL VATGSICAMT TVLLNGLFCL PRIIYAMAVD bmy_14704T0/1-634 PNSALADAFY QRGYSWAGYL VATGSICAMT TVLLNGLFCL PRIIYAMAAD BACU017119/1-634 PNSALADAFY QRGYSWAGYL VATGSICAMT TVLLNGLFCL PRIIYAMAAD 351 400 ENSP00000372390/1-635 GLFFQVFAHV HPRTQVPVAG TLAFGLLTAF LALLLDLESL VQFLSLGTLL ENSBTAP00000012050/1-629 GLFFEMFAYV HPRTQVPLLG ILAFGALTAV VTLLLDLDAL VQFLSIGTLL ENSTTRP00000008718/1-634 GLFFQAFAYV HPRTQVPLVG ILVFGVLTVL VALLLDLEAL VQFLSIGTLL bmy_14704T0/1-634 GLFFQAFAYV HPRTQVPLVG ILVFGVLTAL VALLLDLEAL VQFLSIGTLL BACU017119/1-634 GLFFQAFAYV HPRTQVPLVG ILVFGVLTAL VALLLDLEAL VQFLSIGTLL 401 450 ENSP00000372390/1-635 AYTFVATSII VLRFQKSSPP SSPGPASPGP LTKQQSSFSD HLQLVGTVHA ENSBTAP00000012050/1-629 AYTFVAISVL VLRFQTASQS RSPSLAGSGP KAKEYSSFSD HLELVGAGH- ENSTTRP00000008718/1-634 AYTFVAISII VLRFQKAPLS SSPSPASPRP AAKEYNSFSD HIELVGTEQV bmy_14704T0/1-634 AYSFVAISII VLRFQKAPLS SSPSPASPCP AAKEYNSFSD HIELVGTEQV BACU017119/1-634 AYSFVAISII VLRFQKAPLS SSPSPASPRP AAKEYNSFSD HIELVGTEQF 451 500 ENSP00000372390/1-635 SVPEPGELKP ALRPYLGFLD GYSPGAVVTW ALGVMLASAI TIGCVLVFGN ENSBTAP00000012050/1-629 -GPEPGRLRP ALRPYLGFLD RGSPGAAVRG AVCGLVVSAI ALGCVLMLGH ENSTTRP00000008718/1-634 PAPEPGQLRP ALRPYLGFLD RCSPGVAVAS AICVLVASAI TLGCVLIFGD bmy_14704T0/1-634 PAPEPGQLRP ALRPYLGFLD RCSPGVAVAS AICVLVASAI TLGCVLIFGH BACU017119/1-634 PAPEPGQLRP ALRPYLGFLD RCSPGVAVAS AICVLVASAI TLGCVLIFGD 501 550 ENSP00000372390/1-635 STLHLPHWGY ILLLLLTSVM FLLSLLVLGA HQQQYREDLF QIPMVPLIPA ENSBTAP00000012050/1-629 SVLRLPLWGF LLLLLCSSVT FLLSLLVLGA HQQQRLKDTF QMPLVPLIPA ENSTTRP00000008718/1-634 SALHLPRWGY ILLLLLCSIM FLLSLLVLGA HQQQRQQDTF QIPMVPLIPA bmy_14704T0/1-634 SALYLPRWGY ILLLLLCGIM FLLSLLVLGA HQQQRQQDTF QIPMVPLIPA BACU017119/1-634 SALHLPRWGY ILLLLLCGIM FLLSLLVLGA HQQQRQQDTF QIPMVPLIPA 551 600 ENSP00000372390/1-635 LSIVLNICLM LKLSYLTWVR FSIWLLMGLA VYFGYGIRHS KENQRELPGL ENSBTAP00000012050/1-629 LSIVLNFCLM LKLSYLTWVR FTIWLLIGLL VYFGYGIWHS KENWREPPGL ENSTTRP00000008718/1-634 LSILLNICLM LKLSYLTWVR FSIWLLIGLL VYFGYGIWHS KENQRELPGL bmy_14704T0/1-634 LSILLNICLM LKLSYLTWVR FSIWLLIGLL VYFGYGIWHS KENQRELPGV BACU017119/1-634 LSILLNICLM LKLSYLTWVR FSIWLLIGLL VYFGYGIWHS KENQRELPGV 601 650 ENSP00000372390/1-635 NSTHYVVFPR GSLEETVQAM QPPSQAPAQD PGHME ENSBTAP00000012050/1-629 VTARYVAFSD GRVEETV--- RDPGQAPAQG PGSP- ENSTTRP00000008718/1-634 TITRYVVFSS GSLEETVQVV QPPSQVP-QE PSSPE bmy_14704T0/1-634 TITCYVVFPS GSLEETVQVV QPPSQAPAQE PSSP- BACU017119/1-634 TITRYVVFPS GSLEETVQVV QPPSQAPAQE PSSP-