KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:45:37 2014 Check: 00 .. Name: ENSTTRP00000009234/1-169 Len: 170 Check: 7478 Weight: 1.00 Name: ENSP00000309792/1-140 Len: 170 Check: 8477 Weight: 1.00 Name: bmy_11833T0/1-72 Len: 170 Check: 9155 Weight: 1.00 Name: ENSBTAP00000012078/1-140 Len: 170 Check: 9265 Weight: 1.00 // 1 50 ENSTTRP00000009234/1-169 MAATLXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000309792/1-140 MAASLGQVLA LVLVAALWGG TQPLLKRASA GLQRVHEPTW AQQLLQEMKT bmy_11833T0/1-72 ------QVLA LVLVAALWGG TQPLLKRASS HLQQVHERTW ARQLLQETKT ENSBTAP00000012078/1-140 MAATLGQVLA LVLVAALWGG TQPLLKRASS RLQQVHERTW ARQLLQEMKT 51 100 ENSTTRP00000009234/1-169 XXL-TEYLLP FSLNQCGSLL YYLTLASTDL TLAVPISNSL AIIFTLIVGK ENSP00000309792/1-140 LFLNTEYLMP FLLNQCGSLL YYLTLASTDL TLAVPICNSL AIIFTLIVGK bmy_11833T0/1-72 LFLNTEYLMP FSLNQCGSLL YYLTLAST-- ---------- ---------- ENSBTAP00000012078/1-140 LFLNPEYLMP FSLNQCGSLL YYLTLASTDL TLAVPISNSL AIIFTLIVGK 101 150 ENSTTRP00000009234/1-169 VLGEDIGGKR KSGHCKFGEP LLGLHPWVSF FRAISLGPVR RGSSPILPFL ENSP00000309792/1-140 ALGEDIGGKR AVAGMVLTVI GISLCITSSV SKT------- QGQQSTL--- bmy_11833T0/1-72 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012078/1-140 VLGEDIGGKR AFAGMVLTVA GITLCITSSV TKT------- QGQPSAL--- 151 200 ENSTTRP00000009234/1-169 LQLHCFLVAI RVSFPWVVWG ENSP00000309792/1-140 ---------- ---------- bmy_11833T0/1-72 ---------- ---------- ENSBTAP00000012078/1-140 ---------- ----------