KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:40 2014 Check: 00 .. Name: ENSBTAP00000012101/1-216 Len: 241 Check: 3749 Weight: 1.00 Name: ENSP00000296444/1-240 Len: 241 Check: 4555 Weight: 1.00 Name: ENSTTRP00000016421/1-239 Len: 241 Check: 6677 Weight: 1.00 Name: bmy_05976T0/1-239 Len: 241 Check: 6226 Weight: 1.00 Name: BACU020567/1-216 Len: 241 Check: 7247 Weight: 1.00 // 1 50 ENSBTAP00000012101/1-216 MAAPAPAPRI L--VLLLLLL PAPEGAQSEL CMISHGRKVD PWVCPDFCCG ENSP00000296444/1-240 MTAPVPAPRI LLPLLLLLLL TPPPGARGEV CMASRGLSLF PESCPDFCCG ENSTTRP00000016421/1-239 MAAPAPAPRI L--LLLLLLL PAPPGAHSEV CMVSAGHNLF PKFCPDFCCG bmy_05976T0/1-239 MAAPAPAPRF L--LLLLLLL PAPPGAHSEV CMVSPGRNLF PKFCPDFCCG BACU020567/1-216 ---------- ---------- -----AHSEV CMVSPGRNLF PKFCPDFCCG 51 100 ENSBTAP00000012101/1-216 NCNDQYCCSD VLKQVMWIEE DCHAPEARIF SCF------- ----FSSCFN ENSP00000296444/1-240 TCDDQYCCSD VLKKFVWSEE RCAVPEASVP ASVEPVEQLG SALRFRPGYN ENSTTRP00000016421/1-239 TCYDQYCCSD VLKKFVWNGE ECGVPEASVP TNVEPPEQLG STLKLRFSLD bmy_05976T0/1-239 TCHDQYCCSD VLKKFVWNGE ECGVPEASVP ANVEPPEQLG STLKFRSSLD BACU020567/1-216 TCYDQYCCSD VLKKFVWNGE ECGVPEASVP TNVEPPEQLG STLKFRSSLD 101 150 ENSBTAP00000012101/1-216 SHPSIRFGTV IAIGVTLFVI AVVTVIVCCT CSCCCLYKMC RRPQPVVTTT ENSP00000296444/1-240 -DPMSGFGAT LAVGLTIFVL SVVTIIICFT CSCCCLYKTC RRPRPVVTTT ENSTTRP00000016421/1-239 SDPMSGFGTT VAVGLTIFVL SVVTIIICFT CSCCYLYKMC RRPRPVVTTT bmy_05976T0/1-239 SDPMSGFGTT VAVGLTIFVL SVVTIIICFT CSCCYLYKMC RRPRPVVTTT BACU020567/1-216 SDPMSGFGTT VAVGLTIFVL SVVTIIICFT CSCCYLYKMC RRPRPVVTTT 151 200 ENSBTAP00000012101/1-216 MATTVTHTPY LQ----PPSY PGPTYQGYHS VVPQPGMPTA PYPT------ ENSP00000296444/1-240 TSTTVVHAPY PQPPSVPPSY PGPSYQGYHT MPPQPGMPAA PYPMQYPPPY ENSTTRP00000016421/1-239 TATTVVHTPY SQAPSVPPSY PGPTYQGYHP MPPQPGMPAA PYPTQYPPPY bmy_05976T0/1-239 TATTVVHTPY SQAPNVPPSY PGPTYQGYHS MPPQPGMPAA PYPMQYPPPY BACU020567/1-216 TATTVVHTPY SQAPSVPPSY PGPTYQGYHS MPPQPGMPAA PYPTQYPPPY 201 250 ENSBTAP00000012101/1-216 --QPTGPPAY HETMAGGAAL PYPASQPPYN PAYMEPPKAV P ENSP00000296444/1-240 PAQPMGPPAY HETLAGGAAA PYPASQPPYN PAYMDAPKAA L ENSTTRP00000016421/1-239 LAQPMGPPAY HETVAGGAAM PYPASQPPYN PAYMDPPKAA P bmy_05976T0/1-239 PAQPMGPPAY HETVAGGAAM PYPASQPPYN PAYMDPPKAA P BACU020567/1-216 LAQPMGPPAY HETVAGGAAM PYPASQPPYN PAYMDPPKAA P