KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:42 2014 Check: 00 .. Name: ENSP00000371253/1-1010 Len: 1010 Check: 5272 Weight: 1.00 Name: ENSBTAP00000012108/1-1010 Len: 1010 Check: 4957 Weight: 1.00 Name: bmy_01213T0/1-947 Len: 1010 Check: 5167 Weight: 1.00 Name: ENSTTRP00000004396/1-1010 Len: 1010 Check: 6398 Weight: 1.00 Name: BACU010402/1-1010 Len: 1010 Check: 5386 Weight: 1.00 // 1 50 ENSP00000371253/1-1010 MAARVLIIGS GGREHTLAWK LAQSHHVKQV LVAPGNAGTA CSEKISNTAI ENSBTAP00000012108/1-1010 MAARVLVIGN GGREHTLAWK LAQSTHVKQV LVTPGNAGTA CSEKISNTDI bmy_01213T0/1-947 MKRPCRKLGC G--------- ---------C LFPP------ ---------- ENSTTRP00000004396/1-1010 MAARVLVIGN GGREHTLAWK LAQSNHVKQV LVTPGNAGTA CSEKISNTDI BACU010402/1-1010 MAARILVIGN GGREHTLAWK LAQSNHVKQV LVTPGNAGTA CSEKISNTDI 51 100 ENSP00000371253/1-1010 SISDHTALAQ FCKEKKIEFV VVGPEAPLAA GIVGNLRSAG VQCFGPTAEA ENSBTAP00000012108/1-1010 SISDHTALAQ FCKDEKIEFV VVGPEAPLAA GIVGNLNSVG VRCFGPTAQA bmy_01213T0/1-947 ---------- ---------- ---------L GIAGSLASAG VRCFGPTAGA ENSTTRP00000004396/1-1010 SISDHTALAQ FCKDEKIEFV VVGPEAPLAA GIVGSLTSAG VRCFGPTAEA BACU010402/1-1010 SISDHTALAQ FCKDEKIEFV VVGPEAPLAA GIAGSLASAG VRCFGPTAEA 101 150 ENSP00000371253/1-1010 AQLESSKRFA KEFMDRHGIP TAQWKAFTKP EEACSFILSA DFPALVVKAS ENSBTAP00000012108/1-1010 AQLESSKRFA KEFMDRHGIS TARWRAFTKP KEACDFIMSA DFPALVVKAS bmy_01213T0/1-947 AQLESSKRFA KEFMDRHGIP TAQWRAFTKA EEACRFIMSA DFPALVVKAS ENSTTRP00000004396/1-1010 AQLESSKRFA KEFMDRHGIP TAQWRAFTKA EEACCFIMSA DFPALVVKAS BACU010402/1-1010 AQLESSKRFA KEFMDRHGIP TAQWRAFTKA EEACRFIMSA DFPALVVKAS 151 200 ENSP00000371253/1-1010 GLAAGKGVIV AKSKEEACKA VQEIMQEKAF GAAGETIVIE ELLDGEEVSC ENSBTAP00000012108/1-1010 GLAAGKGVIV AKSKEEACEA VREIMQGKAF GEAGETVVIE ELLEGEEVSC bmy_01213T0/1-947 GLAAGKGVVV AKSKEEACKA VQEIMQDKAF GEAGETTVIE ELLEGEEVSC ENSTTRP00000004396/1-1010 GLAAGKGVVV AKSKEEACKA VQEIMQDKAF GEAGETTVIE ELLEGEEVSC BACU010402/1-1010 GLAAGKGVVV AKSKEEACKA VQEIMQDKAF GEAGETTVIE ELLEGEEVSC 201 250 ENSP00000371253/1-1010 LCFTDGKTVA PMPPAQDHKR LLEGDGGPNT GGMGAYCPAP QVSNDLLLKI ENSBTAP00000012108/1-1010 LCFTDGRTVA PMPPAQDHKR LLEGDEGPNT GGMGAYCPAP QVSKDLLLKI bmy_01213T0/1-947 LCFTDGKTVA PMPPAQDHKR LLEGDQGPNT GGMGAYCPAP QVSKDLLLKI ENSTTRP00000004396/1-1010 LCFTDGKTVA PMPPAQDHKR LLEGDQGPNT GGMGAYCPAP QVSKDLLLKI BACU010402/1-1010 LCFTDGKTVA PMPPAQDHKR LLEGDQGPNT GGMGAYCPAP QVSKDLLLKI 251 300 ENSP00000371253/1-1010 KDTVLQRTVD GMQQEGTPYT GILYAGIMLT KNGPKVLEFN CRFGDPECQV ENSBTAP00000012108/1-1010 KNNILQRTVD GMQEEGMPYT GVLYAGIMLT KNGPKVLEFN CRFGDPECQV bmy_01213T0/1-947 KNTILQRTVD GMQQEGVPYT GVLYAGIMLT KDGPKVLEFN CRFGDPECQV ENSTTRP00000004396/1-1010 KNTILQKTVD GMQQEGVPYT GILYAGIMLT KDGPKVLEFN CRFGDPECQV BACU010402/1-1010 KNTVLQRTVD GMQQEGVPYA GILYAGIMLT KDGPKVLEFN CRFGDPECQV 301 350 ENSP00000371253/1-1010 ILPLLKSDLY EVIQSTLDGL LCTSLPVWLE NHTALTVVMA SKGYPGDYTK ENSBTAP00000012108/1-1010 ILPLLKSDLY EVIQSILDGL LCTSLPVWLD NCAAVTVVMA SKGYPGDYTK bmy_01213T0/1-947 ILPLLKSDLY EVIQSTLDGL LCTSLPVWLD NRTAVTVVMA SKGYPGDYTK ENSTTRP00000004396/1-1010 ILPLLKSDLY EVIQSTLDGL LCTSLPVWLD NRTAVTVVMA SKGYPGDYTK BACU010402/1-1010 ILPLLKSDLY EVIQSTLDGL LCTSLPVWLD NRTAVTVVMA SKGYPGDYTK 351 400 ENSP00000371253/1-1010 GVEITGFPEA QALGLEVFHA GTALKNGKVV THGGRVLAVT AIRENLISAL ENSBTAP00000012108/1-1010 GVEITGFPEA QALGLEVFQA GTALKDGKVV TNGGRVLTVT AIRENLISAL bmy_01213T0/1-947 GVEITGFPEA QALGLEVFQA GTALKDGKVV TNGGRVLTVT AIRENLISAL ENSTTRP00000004396/1-1010 GVEITGFPEA QALGLEVFQA GTALKDGKVV TNGGRVLTVT AIRENLISAL BACU010402/1-1010 GVEITGFPEA QALGLEVFQA GTALKDGKVV TNGGRVLTVT AIRENLISAL 401 450 ENSP00000371253/1-1010 EEAKKGLAAI KFEGAIYRKD VGFRAIAFLQ QPRSLTYKES GVDIAAGNML ENSBTAP00000012108/1-1010 EEARKGLAAI KFEGAVYRKD IGFRAIAFLQ QPRGLTYKES GVDIAAGNML bmy_01213T0/1-947 EGAKKGLAAI KFEGAIYRRD IGYRAIAFLQ QPRGLTYKES GVDIAAGNML ENSTTRP00000004396/1-1010 EEAKKGLAAI KFEGAIYRKD IGYRAIAFLQ QPRGLTYKDS GVDIAAGNML BACU010402/1-1010 EGAKKGLAAI KFEGAIYRND IGYRAIAFLQ QPRGLTYKES GVDIAAGNML 451 500 ENSP00000371253/1-1010 VKKIQPLAKA TSRSGCKVDL GGFAGLFDLK AAGFKDPLLA SGTDGVGTKL ENSBTAP00000012108/1-1010 VQKIKPLAKA TSRPGCDVDL GGFAGLFDLK AAGFTDPLLA CGTDGVGTKL bmy_01213T0/1-947 VKKIKPLAKA TSRPGCDVDL GGFAGLFDLK AAGFNDPLLA CGTDGVGTKL ENSTTRP00000004396/1-1010 VTKIKPLAKA TSRPGCDVDL GGFAGLFDLK AAGFNDPLLA CGTDGVGTKL BACU010402/1-1010 VKKIKPLAKA TSRPGCDVDL GGFAGLFDLK AAGFNDPLLA CGTDGVGTKL 501 550 ENSP00000371253/1-1010 KIAQLCNKHD TIGQDLVAMC VNDILAQGAE PLFFLDYFSC GKLDLSVTEA ENSBTAP00000012108/1-1010 KIAQQCSKHD TIGQDLVAMC VNDILAQGAE PLFFLDYFSC GKLDLRTTEA bmy_01213T0/1-947 KIAQQCHKHE TIGQDLVAMC VNDILAQGAE PLFFLDYFSC GKLDPSTTEA ENSTTRP00000004396/1-1010 KIAQQCHKHE TIGQDLVAMC VNDILAQGAE PLFFLDYFSC GKLDPSTAEA BACU010402/1-1010 KIAQQCHKHE TIGQDLVAMC VNDILAQGAE PLFFLDYFSC GKLDPSTTEA 551 600 ENSP00000371253/1-1010 VVAGIAKACG KAGCALLGGE TAEMPDMYPP GEYDLAGFAV GAMERDQKLP ENSBTAP00000012108/1-1010 VITGIAKACK KAGCALLGGE TAEMPDMYPP GEYDLAGFAV GAMERDQKLP bmy_01213T0/1-947 VVAGIAKACK KAGCALLGGE TAEMPDMYPP GEYDLAGFAV GAMERDQKLP ENSTTRP00000004396/1-1010 VVAGIAKACK KAGCALLGGE TAEMPDMYPP GEYDLAGFAV GAMERDQKLP BACU010402/1-1010 VVAGIAKACK KAGCALLGGE TAEMPDMYPP GEYDLAGFAV GAMERDQKLP 601 650 ENSP00000371253/1-1010 HLERITEGDV VVGIASSGLH SNGFSLVRKI VAKSSLQYSS PAPDGCGDQT ENSBTAP00000012108/1-1010 QLERITEGDA VIGIASSGLH SNGFSLVRKI VAKSSLEYSS PAPGGCGDQT bmy_01213T0/1-947 HLERITEGDA VIGIASSGLH SNGFSLVRKI VAKSSLQYSS LAPDGCGGQA ENSTTRP00000004396/1-1010 HLERITEGDA VIGIASSGLH SNGFSLVRKI VAKSSLQYSS PAPDGCGGQA BACU010402/1-1010 HLERITEGDA VIGIASSGLH SNGFSLVRKI VAKSSLQYSS PAPDGCGGQA 651 700 ENSP00000371253/1-1010 LGDLLLTPTR IYSHSLLPVL RSGHVKAFAH ITGGGLLENI PRVLPEKLGV ENSBTAP00000012108/1-1010 LGDLLLTPTK IYSRSLLPVL RSGRVKAVAH ITGGGLLENI PRVLPQKLGV bmy_01213T0/1-947 LGDLLLTPTR IYSHSLLPVL RSGHVKAFAH ITGGGLLENI PRVLPQKFGV ENSTTRP00000004396/1-1010 LGDLLLTPTR IYSHSLLPVL RSGHVKAFAH ITGGGLLENI PRVLPQKFGV BACU010402/1-1010 LGDLLLTPTR IYSHSLLPVL RSGHVKAFAH ITGGGLLENI PRVLPQKFGV 701 750 ENSP00000371253/1-1010 DLDAQTWRIP RVFSWLQQEG HLSEEEMART FNCGVGAVLV VSKEQTEQIL ENSBTAP00000012108/1-1010 NLDAQTWRVP RIFSWLQQEG HLSEEEMART FNCGIGAALV VSEDLVKQTL bmy_01213T0/1-947 DLDAQTWRIP RIFSWLQQEG HLSEEEMART FNCGIGAALV VSKNLTQQIL ENSTTRP00000004396/1-1010 DLDAQTWRIP RIFSWLQQEG HLSEEEMART FNCGIGAALV VSRDLTQQIL BACU010402/1-1010 DLDAQTWRIP RIFSWLQQEG HLSEEEMART FNCGIGAALV VSKDLTQQIL 751 800 ENSP00000371253/1-1010 RDIQQHKEEA WVIGSVVARA EGSPRVKVKN LIESMQINGS VLKNGSLTNH ENSBTAP00000012108/1-1010 QDIEQHQEEA CVIGRVVACP KGSPRVKVEH LIETMQINGS VLENGTLRNH bmy_01213T0/1-947 QDIQQHKEEA WVIGRVVACP EGSPRVKVKH LIETMQINGS VLENGTLKNH ENSTTRP00000004396/1-1010 QDIQQHKEEA WVIGRVVACP EGSPRVKVKH LIETMQINRS VLENGTLKNH BACU010402/1-1010 QDIQQHKEEA WVIGRVVACP EGSPRVKVKH LIETMQINGS VLENGTLKNH 801 850 ENSP00000371253/1-1010 FSFEKKKARV AVLISGTGSN LQALIDSTRE PNSSAQIDIV ISNKAAVAGL ENSBTAP00000012108/1-1010 FSVQPKKARV AVLISGTGSN LQALIDSTRE PSSLAHIVIV ISNKAAVAGL bmy_01213T0/1-947 FSVQPKKARV AVLISGTGSN LQALIDSTRE PSSSAHIVVV ISNRAAVTGL ENSTTRP00000004396/1-1010 VSVQPKKARV AVLISGTGSN LQALIDSTRE PSSSAHIVVV ISNKAAVSGL BACU010402/1-1010 FSVQPKKARV AVLISGTGSN LQALIDSTRE PSSSAHIVVV ISNKAAVTGL 851 900 ENSP00000371253/1-1010 DKAERAGIPT RVINHKLYKN RVEFDSAIDL VLEEFSIDIV CLAGFMRILS ENSBTAP00000012108/1-1010 DKAEKAGIPT RVINHKLYKN RAAFDTAIDE VLEEFSTDIV CLAGFMRILS bmy_01213T0/1-947 DKAERAGIPT RVINHKLYKN RVAFDTTVDQ VLEEFSTDIV CLAGFMRILS ENSTTRP00000004396/1-1010 DKAERAGIPT RVINHKLYKN RAAFDTTVDQ VLEEFSTDIV CLAGFMRILS BACU010402/1-1010 DKAERAGIPT RVINHKLYKN RVAFDTTVDQ VLEEFSTDIV CLAGFMRILS 901 950 ENSP00000371253/1-1010 GPFVQKWNGK MLNIHPSLLP SFKGSNAHEQ ALETGVTVTG CTVHFVAEDV ENSBTAP00000012108/1-1010 GPFVRKWNGK MLNIHPSLLP SFKGSNAHEQ VLDAGVTVTG CTVHFVAEDV bmy_01213T0/1-947 GPFVRKWNGK MLNIHPSLLP SFKGSNAHEQ VLDAGVTVTG CTVHFVAEDV ENSTTRP00000004396/1-1010 GPFVRKWNGK MLNIHPSLLP SFKGSNAHEQ VLDAGVTVTG CTVHFVAEDV BACU010402/1-1010 GPFVRKWNGK MLNIHPSLLP SFKGSNAHEQ VLDAGVTVTG CTVHFVAEDV 951 1000 ENSP00000371253/1-1010 DAGQIILQEA VPVKRGDTVA TLSERVKLAE HKIFPAALQL VASGTVQLGE ENSBTAP00000012108/1-1010 DAGQIILQEA VPVKRGDTVE TLSERVKLAE HKIFPSALQL VASGAVRLGE bmy_01213T0/1-947 DAGQIILQEA VPVKRGDTVE TLSERVKLAE HKIFPSALQL VASGTVRLGE ENSTTRP00000004396/1-1010 DAGQIILQEA VPVKRGDTVE TLSERVKLAE HKIFPSALQL VASGTVRLGE BACU010402/1-1010 DAGQIILQEA VPVKRGDTVE TLSERVKLAE HKIFPSALQL VASGTVRLGE 1001 1050 ENSP00000371253/1-1010 NGKICWVKEE ENSBTAP00000012108/1-1010 NGRICWVTED bmy_01213T0/1-947 NGKICWVKEE ENSTTRP00000004396/1-1010 NGKICWVKEE BACU010402/1-1010 NGKICWVKEE