KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:43 2014 Check: 00 .. Name: ENSP00000262366/1-524 Len: 524 Check: 9595 Weight: 1.00 Name: ENSBTAP00000012119/1-524 Len: 524 Check: 2846 Weight: 1.00 Name: ENSTTRP00000002541/1-523 Len: 524 Check: 8145 Weight: 1.00 Name: BACU009159/1-524 Len: 524 Check: 8293 Weight: 1.00 Name: bmy_02784T0/1-477 Len: 524 Check: 1252 Weight: 1.00 // 1 50 ENSP00000262366/1-524 MHSLDEPLDL KLSITKLRAA REKRERTLGV VRPRALHREL GLVDDSPTPG ENSBTAP00000012119/1-524 MHSLDEPLDL KLSITKLRAA REKRERTLSA ARHRALHREL GLADDSPTPG ENSTTRP00000002541/1-523 MHSLDEPLDL KLSITKLRAA REKRERTLSA VRHRALHREL GLVDDSPTPG BACU009159/1-524 MHSLDEPLDL KLSITKLRAA REKRERTLSA VRHRALHREL GLVDDSPTPG bmy_02784T0/1-477 MHSLDEPLDL KLSITKLRAA REKRERTLSA VRHRALHREL GLVDDSPTPG 51 100 ENSP00000262366/1-524 SPGSPPSGFL LNSKFPEKVE GRFSAAPLVD LSLSPPSGLD SPNGSSSLSP ENSBTAP00000012119/1-524 SPGSPPSGFL LNPKFPEKVE GRFSAAPLVD LSLSPPSGLD SPNGSSSLSP ENSTTRP00000002541/1-523 SPGSPPSGFL LNPKFPEKVE GRFSAAPLVD LSLSPPSGLD SPNGSSSLSP BACU009159/1-524 SPGSPPSVFL LHPKFPEKVE GRFSAAPLVD LSLSPPSGLD SPNGSSSLSP bmy_02784T0/1-477 SPGSPPSGFL LNPKFPEK-- ---------- ---------- ---------- 101 150 ENSP00000262366/1-524 ERQGNGDLPP VPSASDFQPL RYLDGVPSSF QFFLPLGSGG ALHLPASSFL ENSBTAP00000012119/1-524 ERQGNGDLPT APAGPDLQPL RYLDGVPSSF QFFLPLGSGG ALHLPASSFL ENSTTRP00000002541/1-523 ERQGNGDLPA VPTGPDLQPL RYLDSVPSSF QFFLPLGSGG ALHLPASSFL BACU009159/1-524 ERQGNGDLPA VPTGPDLQPL RYLDSVPSSF QFFLPLGSGG ALHLPASSFL bmy_02784T0/1-477 ---------- -----DLQPL RYLDSVPSSF QFFLPLGSGG ALHLPASSFL 151 200 ENSP00000262366/1-524 TPPKDKCLSP DLPLPKQLVC RWAKCNQLFE LLQDLVDHVN DYHVKPEKDA ENSBTAP00000012119/1-524 TPPKDKCLSP ELPLPKQLVC RWAKCNQPFE LLQDLVDHVN DYHVKPEKDA ENSTTRP00000002541/1-523 TPPKDKCLSP ELPLPKQLVC RWAKCNQPFE LLQDLVDHVN DYHVKPEKDA BACU009159/1-524 TPPKDKCLSP ELPLPKQLVC RWAKCNQPFE LLQDLVDHVN DYHVKPEKDA bmy_02784T0/1-477 TPPKDKCLSP ELPLPKQLVC RWAKCNQPFE LLQDLVDHVN DYHVKPEKDA 201 250 ENSP00000262366/1-524 GYCCHWEGCA RHGRGFNARY KMLIHIRTHT NEKPHRCPTC SKSFSRLENL ENSBTAP00000012119/1-524 GYCCHWEGCA RHGRGFNARY KMLIHIRTHT NEKPHRCPTC SKSFSRLENL ENSTTRP00000002541/1-523 GYCCHWEGCA RHGRGFNARY KMLIHIRTHT NEKPHRCPTC SKSFSRLENL BACU009159/1-524 GYCCHWEGCA RHGRGFNARY KMLIHIRTHT NEKPHRCPTC SKSFSRLENL bmy_02784T0/1-477 GYCCHWEGCA RHGRGFNARY KMLIHIRTHT NEKPHRCPTC SKSFSRLENL 251 300 ENSP00000262366/1-524 KIHNRSHTGE KPYVCPYEGC NKRYSNSSDR FKHTRTHYVD KPYYCKMPGC ENSBTAP00000012119/1-524 KIHNRSHTGE KPYVCPYEGC NKRYSNSSDR FKHTRTHYVD KPYYCKMPGC ENSTTRP00000002541/1-523 KIHNRSHTGE KPYVCPYEGC NKRYSNSSDR FKHTRTHYVD KPYYCKMPGC BACU009159/1-524 KIHNRSHTGE KPYVCPYEGC NKRYSNSSDR FKHTRTHYVD KPYYCKMPGC bmy_02784T0/1-477 KIHNRSHTGE KPYVCPYEGC NKRYSNSSDR FKHTRTHYVD KPYYCKMPGC 301 350 ENSP00000262366/1-524 HKRYTDPSSL RKHIKAHGHF VSHEQQELLQ LRPPPKPPLP APDGGPYVSG ENSBTAP00000012119/1-524 HKRYTDPSSL RKHIKAHGHF VSHEQHELLQ LRPPPKPPLP APDGSPYVSG ENSTTRP00000002541/1-523 HKRYTDPSSL RKHIKAHGHF VSHEQQELLQ LRPPPKPPLP T-DGSPYVSG BACU009159/1-524 HKRYTDPSSL RKHIKAHGHF VSHEQQELLQ LRPPPKPPLP APDGSPYVSG bmy_02784T0/1-477 HKRYTDPSSL RKHIKAHGHF VSHEQQELLQ LRPPPKPPLP APDGSPYVSG 351 400 ENSP00000262366/1-524 AQIIIPNPAA LFGGPGLPGL PLPLAPGPLD LSALACGNGG GSGGGGGMGP ENSBTAP00000012119/1-524 AQIIIPNPAA LFGGPGLPGL PLPLAPGPLD LSALACGNGG GAGGAGGMGP ENSTTRP00000002541/1-523 AQIIIPNPAA LFGGPGLPGL PLPLAPGPLD LSALACGNGG SSGGAGGMGP BACU009159/1-524 AQIIIPNPAA LFGGPGLPGL PLPLAPGPLD LSALACGNGG RGGGAGGMGP bmy_02784T0/1-477 AQIIIPNPAA LFGGPSLPGL PLPLAPGPLD LSALACGNGG SGGGAGGMGP 401 450 ENSP00000262366/1-524 GLPGPVLPLN LAKNPLLPSP FGAGGLGLPV VSLLAGAAGG KAEGEKGRGS ENSBTAP00000012119/1-524 GLPGPVLPLN LAKNPLLPSP FGAGGLGLPV VSLLAGSAGG KAEGEKGRGA ENSTTRP00000002541/1-523 GLPGPVLPLN LAKNPLLPSP FGAGGLGLPV VSLLAGSAGG KAEGEKGRGA BACU009159/1-524 GLPGPVLPLN LAKNPLLPSP FGAGGLGLPV VSLLAGSAGG KAEGEKGRGA bmy_02784T0/1-477 GLPGPVLPLN LAKNPLLPSP FGAGGLGLPV VSLLAGSAGG KAEGEKGRGA 451 500 ENSP00000262366/1-524 VPTRALGMEG HKTPLERTES SCSRPSPDGL PLLPGTVLDL STGVNSAASS ENSBTAP00000012119/1-524 MPARALSSEG RKTPLERTEG SRSRPSPDGL PLLPGTVLDL STGVNSAASS ENSTTRP00000002541/1-523 VPARALGTEG HKTPLERTES GRSRPSPDGL PLLPGTVLDL STGVNSAASS BACU009159/1-524 VPARALGTEG RKTPLERTES GRSRPSPDGL PLLPGTVLDL STGVNSAASS bmy_02784T0/1-477 VPARALGTEG RKTPLERTES GRSRPSPDGL PLLPGTVLDL STGVNSAASS 501 550 ENSP00000262366/1-524 PEALAPGWVV IPPGSVLLKP AVVN ENSBTAP00000012119/1-524 PEALAPGWVV IPPGSVLLKP AVVN ENSTTRP00000002541/1-523 PEALTPGWVV IPPGSVLLKP AVVN BACU009159/1-524 PEALTPGWVV IPPGSVLLKP AVVN bmy_02784T0/1-477 PEALTPGWVV IPPGSVLLKP AVVN