KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:45:44 2014 Check: 00 .. Name: ENSBTAP00000012121/1-915 Len: 1048 Check: 1757 Weight: 1.00 Name: BACU009158/1-780 Len: 1048 Check: 1978 Weight: 1.00 Name: bmy_02786T0/1-659 Len: 1048 Check: 9694 Weight: 1.00 Name: ENSTTRP00000008221/1-900 Len: 1048 Check: 7549 Weight: 1.00 // 1 50 ENSBTAP00000012121/1-915 MNRFKVSKFR HTEARQPRRE AWIGDIRAGT APSCGNHIKA SCSLIAFNSD BACU009158/1-780 ---------- ---------- -------MGG GRDCS----- ---------- bmy_02786T0/1-659 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008221/1-900 MNRFKVSKFR HTEARPPRRE TWISDIRAGT VPSCGNHIKA SCSLIAFNSD 51 100 ENSBTAP00000012121/1-915 HPGVLGIVPL ESQGEDKRQV THLGCHSDLV TDLDFSPFDD FLLATASADR BACU009158/1-780 ---------- ---------- ---------- ---------- ---------- bmy_02786T0/1-659 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008221/1-900 RPGVLGIVPL EGQGEDKRHV AHLGCHSDLV TDLDFSPFDD FLLATASADR 101 150 ENSBTAP00000012121/1-915 TVKLWRLPLS GQALPSGPGL LLGPEDAQVE VLQFHPTADG VLLSAAGRAV BACU009158/1-780 ---------- ---------- ---------- ---------- -LLAEAGPT- bmy_02786T0/1-659 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008221/1-900 TMKLWRLPAP GRALPSEPGL VLGPEDVQVE VLQFHPTADG VLVSAAGKTV 151 200 ENSBTAP00000012121/1-915 KVWDATKQQP LTELATHGDL VQGAAWSRDG ALLGTTCKDK QLRIFDPRAK BACU009158/1-780 ---------- ---------- ---------- ---------- ---------- bmy_02786T0/1-659 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008221/1-900 KVWDAAKQQP LTELAAHGDL VQGATWSRDG ALVGTTCKDK QLRIFDPRAK 201 250 ENSBTAP00000012121/1-915 PEAAQSTPAH ENSRDGRLVW TGTQEYLVST GFNQMREREV KLWDTRLFSA BACU009158/1-780 ---------- EARRPSRL-- ---------- ---------- ---------- bmy_02786T0/1-659 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008221/1-900 PEASQSTWAH ENSRDGRLVW TGIQEHLVST GFNKMHEREV KLWDTRLFSS 251 300 ENSBTAP00000012121/1-915 ALTSLTLDTS PRSLVPLLDP DSGLLVLAGK GENQLYCYEA APQQPALSPV BACU009158/1-780 ---------- KGSLMPLLDP DSRLLVLAGK GESQLYCYEV APQQPALSPV bmy_02786T0/1-659 ---------- ----MPLLDP DSGLLVLAGK GESQLYCYEV APQQLALSPV ENSTTRP00000008221/1-900 ACTSLTLDTS PRSLMPLLDP DSRLLVLAGK GDSQLYCYEV APEQPALSPV 301 350 ENSBTAP00000012121/1-915 TQCLLESVLR GAALVPRRAL AVMGCEVLRV LQLSDTAIVP ISYHVPRKTV BACU009158/1-780 TQCLLESALR GVALVPRRAL AVMGCEVLRV LQLSDTAIVP ISYHVPRKAV bmy_02786T0/1-659 TQCLLESALR GVALVPRRAL AVMGCEVLRV LQLSDTAIVP ISYHVPRKAV ENSTTRP00000008221/1-900 TQCLLESVLQ GVALVPRRAL AVMGCEVLRV LQLSDTAVVP ISYHVPRKAV 351 400 ENSBTAP00000012121/1-915 EFHEDLFPDT AGCVPASDPH AWWAGSDQQV QRVSLHPARR AHPSFTSCLA BACU009158/1-780 EFHEDLFPDT AGCVPASDPH AWWAGSNQQ- ------GPPR KRPSLQRHLW bmy_02786T0/1-659 EFHEDLFPDT AGCVPASDPH AWWAGSNQQV QRVSLHPACR PHPSFTSRLV ENSTTRP00000008221/1-900 EFHEDLFPDT AGCVPASDPH AWWAGSNQQV QRVSLHPACR PHPSFTSHLV 401 450 ENSBTAP00000012121/1-915 PPAELTPATA QPAGTP---- ---EGFSSTP SSLTSPSTPS SLGPSL--TS BACU009158/1-780 ---------- ---------- -----VMRTP ALLTSPSTPS SLGPSLSISS bmy_02786T0/1-659 PPAGPTPEEA QPAETPVGDA DPSEGFSSPP SLLTSPSTPS SLGPSL--SS ENSTTRP00000008221/1-900 PPAEPTPEEA QPTETPVGDA DPSEGFSSPP SWLTSPSTPS SLGPSL--SS 451 500 ENSBTAP00000012121/1-915 TSGIGTSPSQ RSLQSLLGPS SKFRHAQGSV LHRDSHITNL KGLNLTTPGE BACU009158/1-780 TSGIGTSPSQ RSLQSLLGPS SKFRHAQGTI LHRDSHITNL KGLNLTTPGE bmy_02786T0/1-659 TSGIGTSPSQ RSLQSLLGPS SKFRHAQGTV LHRDSHITNL KGLNLTTPGE ENSTTRP00000008221/1-900 TSGISTSPSQ RSLQSLLGPS SKFRHAQGTV LHRDSHITNL KGLNLTTPGE 501 550 ENSBTAP00000012121/1-915 SDGFCANQLR VAVPLLSSGG QVAVLELRKP GRLPDTALPT LQNGVAVTDL BACU009158/1-780 SDGFCANWQR VAMPLLSSGG QVAVLELRKP GRLPDTVLPT LQNGAAVTDL bmy_02786T0/1-659 SDGFCANRQR VAMPLLSSGG QVAVLELRKP GRLPDTALPT LQNGAAVTDL ENSTTRP00000008221/1-900 SDGFCANWQR VAMPLLSSGG QVAVLELRKP GRLPDTALPT LQNGAAVTDL 551 600 ENSBTAP00000012121/1-915 AWDPFDPHRL AVAGEDARIR LWRVPPDGLQ EVLTMPEAVL TGHTEKIYSL BACU009158/1-780 AWDPFDPHHL AVAGEDARIR LWRVPPEGLE EVLTMPEAVL TGHTEKIYSL bmy_02786T0/1-659 AWDPFDPHHL AVAGEDARIR LWRVPPEGLE EVLTMPEAVL TGHTEKIYSL ENSTTRP00000008221/1-900 AWDPFDPHHL AVAGEDARIR LWRVPPEGLE EVLTMPEAVL TGHTEKIYSL 601 650 ENSBTAP00000012121/1-915 RFHPLAADVL ASSSYDLTVR IWDLKVGAEQ LRLQGHRDQI FGLAWSPDGQ BACU009158/1-780 RFHPLAADVL ASSSYDLTIR IWDLKAGAER LRLQGHRDQI FGLAWSSDGR bmy_02786T0/1-659 RFHPLAADVL ASSSYDLTIR IWDLKAGAER LRLQGHRDQI FGLAWSSDGR ENSTTRP00000008221/1-900 RFHPLAADVL ASSSYDLTIR IWDLKAGAER LRLQGHRDQI FGLAWSPDGR 651 700 ENSBTAP00000012121/1-915 QLATVCKDGR LRIYEPRGSP EPLQEGPGPE GARGARVVWV CDGHYLLVSG BACU009158/1-780 QLATVCKDGH LRIYEPRGSP EPLQEGPGPE GARGARIVWV CDGHCLLVSG bmy_02786T0/1-659 QLATVCKDGH LRIYEPRGSP EPLQEGPGPE GARGARIVWV CDGHCLLVSG ENSTTRP00000008221/1-900 QLATVCKDGH LRIYEPRGSP EPLQEGPGPE GARGARIVWV CDGHCLLVSG 701 750 ENSBTAP00000012121/1-915 FDSRSERQLL LYSAKALAGG PSAVLGLDVA PSTLLPSYDP DTGLVLLTGK BACU009158/1-780 FDSRSERQLL LYSAEALASG PLAVLGLDVA PSTLLPSYDP DTRLVLLTGK bmy_02786T0/1-659 FDSRSERQLL LYSAEALASG PLAVLGLDVA PSTLLPSYDP DTRLVLLTGK ENSTTRP00000008221/1-900 FDSRSERQLL LYSAEALASG PLAVLGLDVA PSTLLPSYDP DTRLVLLTGK 751 800 ENSBTAP00000012121/1-915 GDTRVFLYEL LPEAPFFLEC NSFTSPDPHK GFILLPKTEC DVREVEFARC BACU009158/1-780 GDTRVFLYEL LPEAPFFLEC NSFTSPDPHK GFILLPKTEC DVREVEFARC bmy_02786T0/1-659 GDTRVFLYEL LPEAPFFLEC NSFTSPDPHK GFILLPKTEC DVREVEFARC ENSTTRP00000008221/1-900 GDTRVFLYEL LPEAPFFLEC NSFTSPDPHK GFILLPKTEC DVREVEFARC 801 850 ENSBTAP00000012121/1-915 LRLRQTSLEP VAFRLPRVRK EFFQDDVFPD TTVSWEPALS AEAWLGGANG BACU009158/1-780 LRLRQTSLEP VTFRLPRVRK EFFQDDVFPD TAVSWEPVLS AGAWLGGANG bmy_02786T0/1-659 LRLRQTSLEP VTFRLPRVRK EFFQDDVFPD TAVSWEPVLS AEAWLGGANG ENSTTRP00000008221/1-900 LRLRQTSLEP VTFRLPRVRK EFFQDDVFPD TAVSWEPVLS AEAWLGGANG 851 900 ENSBTAP00000012121/1-915 TPRLLSLQPP GMTPVSQAPR EAPARRAPSS -VYLEEKSDQ QKKEELLSAM BACU009158/1-780 QPRLLSLQPP DMTPVSQAPR EGPARRAPAS ALYLEEKSDQ QKKEELLSAM bmy_02786T0/1-659 QPRLLSLQPP DMTPVSQAPR EGPARRAPSS ALYLEEKSDQ QKKEELLSAM ENSTTRP00000008221/1-900 QPRLLSLQPP DMTP------ ---------- -------GRT QKKEELLSAM 901 950 ENSBTAP00000012121/1-915 VAKLGNREDP LPQDSFEGVD EDEWD----- ---------- ---------- BACU009158/1-780 VAKLGNRVDP LPQDSFEGVD EDEWAKYLAQ IIVMGAQVVG RAFARALQQE bmy_02786T0/1-659 VAKLGNRVDP LPQDSFEGVD EDEWD----- ---------- ---------- ENSTTRP00000008221/1-900 VAKLGNRVDP LPQDSFEGVD EDEWD----- ---------- ---------- 951 1000 ENSBTAP00000012121/1-915 ---------- ---------- ---------- ---------- ---------- BACU009158/1-780 FAASRAAADA RGRAGHQSAA ASNLSGLSLQ EAQQILNISK LSAEEIQKNY bmy_02786T0/1-659 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008221/1-900 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSBTAP00000012121/1-915 ---------- ---------- ---------- ---------- -------- BACU009158/1-780 EHLFKVNDKS VGGSFYLQSK VVRAKERLEE ELRIQAQEDR EQEQPPKT bmy_02786T0/1-659 ---------- ---------- ---------- ---------- -------- ENSTTRP00000008221/1-900 ---------- ---------- ---------- ---------- --------