KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:49 2014 Check: 00 .. Name: ENSP00000353344/1-469 Len: 583 Check: 9144 Weight: 1.00 Name: ENSBTAP00000012144/1-448 Len: 583 Check: 3112 Weight: 1.00 Name: ENSTTRP00000000749/1-470 Len: 583 Check: 8043 Weight: 1.00 Name: bmy_13042T0/1-472 Len: 583 Check: 3998 Weight: 1.00 Name: BACU010443/1-583 Len: 583 Check: 2875 Weight: 1.00 // 1 50 ENSP00000353344/1-469 --------MN DFGIKNMDQV APVANSYRGT LKRQPAFDTF DGSLFAVFPS ENSBTAP00000012144/1-448 ---------- ---------- ---------- LQRQAAFDTF DGSLLAVFPS ENSTTRP00000000749/1-470 --------MN DFGIKNMDQV APVSSSYRGT LKRQPAFDTF DGSLLAAFPS bmy_13042T0/1-472 --------MN DFGIKNMDQV APVSSSYRGT LKRQPAFDTF DGSLLAVFPS BACU010443/1-583 MVIPGDRQMN DFGIKNMDQV APVSSSYRGT LKRQPAFDTF DGSLLAVFPS 51 100 ENSP00000353344/1-469 LNEEQTLQEV PTGLDSISHD SANCELPLLT PCSKAVMSQA LKATFSGFKK ENSBTAP00000012144/1-448 LNEEQTLQEV PTGLDSISHD SANCELPLLT PCSKAVMSQA LKATFSGFKK ENSTTRP00000000749/1-470 LNEEQTLQEV PTGLDSIAHD STNCELPLLT PCSKAVMSQA LKATFSGFKK bmy_13042T0/1-472 LNEEQTLQEV PTGLDSISHD STNCELPLLT PCSKAVMSQA LKATFSGFKK BACU010443/1-583 LNEEQTLQEV PTGLDSISHD STNCELPLLT PCSKAVMSQA LKATFSGFKK 101 150 ENSP00000353344/1-469 EQRRLGIPKN PWLWSEQQVC QWLLWATNEF SLVNVNLQRF GMNGQMLCNL ENSBTAP00000012144/1-448 EQRRLGIPKN PWLWTEQQVC QWLLWATNEF SLVDVNLQRF GMTGQVLCNL ENSTTRP00000000749/1-470 EQRRLGIPKN PWLWTEQQVC QWLLWATNEF SLVDVNLQRF GMTGQVLCNL bmy_13042T0/1-472 EQRRLGIPKN PWLWTEQQVC QWLLWATNEF SLVDVNLQRF GMTGQVLCNL BACU010443/1-583 EQRRLGIPKN PWLWTEQQVC QWLLWATNEF SLVDVNLQRF GMTGQVLCNL 151 200 ENSP00000353344/1-469 GKERFLELAP DFVGDILWEH LEQMIK--EN QEKTEDQYEE NSHLTSVPHW ENSBTAP00000012144/1-448 GKERFLELAP DFVGDILWEH LEQMIK--EN QEKNEDQYEE NSHLNSVPHW ENSTTRP00000000749/1-470 GKERFLELAP DFVGDILWEH LEQMIK--EN QEKTEDQYEE ISHLNSVPHW bmy_13042T0/1-472 GKERFLELAP DFVGDILWEH LEQMIKGTEN QEKTEDQYEE NSHLNSVPHW BACU010443/1-583 GKERFLELAP DFVGDILWEH LEQMIKGTEN QEKTEDQYEE NSHLNSVPHW 201 250 ENSP00000353344/1-469 INSNTLGFGT EQAPYGMQTQ NYPKGGLLDS MCPAST-PSV LSSEQEFQMF ENSBTAP00000012144/1-448 INSNSLGFGV EQAPYGMQTQ SYPKGGLLDG LCPASSAPST LGPEQDFQMF ENSTTRP00000000749/1-470 INSNSLGFGV EQALYGMQTQ NYPKGGLLDG LCPASSAPST LGPEQDFQMF bmy_13042T0/1-472 INSNSLGFGV EQALYGMQTQ NYPKGGLLDG LCPASSAPST LGPEQDFQMF BACU010443/1-583 INSNSLGFGA EQALYGMQTQ NYPKGGLLDG LCPASSAPST LGPEQDFQMF 251 300 ENSP00000353344/1-469 PKSRLSSVSV TYCSVSQDFP GSNLNLLTNN S--------- ---------- ENSBTAP00000012144/1-448 PKARLNTVSV NYCSVGQDFP AGSLNLLSSA S--------- ---------- ENSTTRP00000000749/1-470 PKARLSTVSV NYCSISQDFP AATLNLLSSS S--------- ---------- bmy_13042T0/1-472 PKARLSTVSV NYCSISQDFP AGTLNLLSSS S--------- ---------- BACU010443/1-583 PKAQLSTVSV NYCSISQDFP AGTLNLLSSS SGKIQASERP SQQGCQFDSQ 301 350 ENSP00000353344/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012144/1-448 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000749/1-470 ---------- ---------- ---------- ---------- ---------- bmy_13042T0/1-472 ---------- ---------- ---------- ---------- ---------- BACU010443/1-583 SHGDMSSDIR SSASGGGQGL VRWVTVPTVA LGELTPNGIV KSLGDPAPAG 351 400 ENSP00000353344/1-469 ---------- ---------- ---------- ----GTPKDH DSPENGADSF ENSBTAP00000012144/1-448 ---------- ---------- ---------- ----GKPRDH DSAETGGDSF ENSTTRP00000000749/1-470 ---------- ---------- ---------- ----GKPGDH DSAETGADSF bmy_13042T0/1-472 ---------- ---------- ---------- ----GXPGDH DSAETGADSF BACU010443/1-583 RTFKGGDGDD AASVGGSTGR SVVLEGQSLS LSLPGKPGDH DSAETGADSF 401 450 ENSP00000353344/1-469 ESSDSLLQSW NSQSSLLDVQ RVPSFESFED DCSQSLCLNK PTMSFKDYIQ ENSBTAP00000012144/1-448 ESSESLLQSW NSQSSLLDVQ RVPSFESFED DCSQSLGLSK PTMSFKDYIQ ENSTTRP00000000749/1-470 ESSESLLQSW NSQSSLLDVQ RVPSFESFED DCSQSLGLSK PTMSFKDYIQ bmy_13042T0/1-472 ESSESLLQSW NSQSSLLDVQ RVPSFESFED DCSQSLGLSK PTMSFKDYIQ BACU010443/1-583 ESSESLLQSW NSQSSLLDVQ RVPSFESFED DCSQSLGLSK PTMSFKDYIQ 451 500 ENSP00000353344/1-469 ERSDPVEQGK PVIPAAVLAG FTGSGPIQLW QFLLELLSDK SCQSFISWTG ENSBTAP00000012144/1-448 DRSDPVEQGK PVIPAAVLAG FTGSGPIQLW QFLLELLSDK SCQSFISWTG ENSTTRP00000000749/1-470 ERSDPVEQGK PVIPAAVLAG FTGSGPIQLW QFLLELLSDK SCQSFISWTG bmy_13042T0/1-472 ERSDPVEQGK PVIPAAVLAG FTGSGPIQLW QFLLELLSDK SCQSFISWTG BACU010443/1-583 ERSDPVEQGK PVIPAAVLAG FTGSGPIQLW QFLLELLSDK SCQPFISWTG 501 550 ENSP00000353344/1-469 DGWEFKLADP DEVARRWGKR KNKPKMNYEK LSRGLRYYYD KNIIHKTSGK ENSBTAP00000012144/1-448 DGWEFKLADP DEVARRWGKR KNKPKMNYEK LSRGLRYYYD KNIIHKTSGK ENSTTRP00000000749/1-470 DGWEFKLADP DEVARRWGKR KNKPKMNYEK LSRGLRYYYD KNIIHKTSGK bmy_13042T0/1-472 DGWEFKLADP DEVARRWGKR KNKPKMNYEK LSRGLRYYYD KNIIHKTSGK BACU010443/1-583 DGWEFKLADP DEVARRWGKR KNKPKMNYEK LSRGLRYYYD KNIIHKTSGK 551 600 ENSP00000353344/1-469 RYVYRFVCDL QNLLGFTPEE LHAILGVQPD TED ENSBTAP00000012144/1-448 RYVYRFVCDL QNLLGFTPEE LHAILGVQPD TED ENSTTRP00000000749/1-470 RYVYRFVCDL QNLLGFTPEE LHAILGVQLD TED bmy_13042T0/1-472 RYVYRFVCDL QNLLGFTPEE LHAILGVQPD TED BACU010443/1-583 RYVYRFVCDL QNLLGFTPEE LHAILGVQPD TED