KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:51 2014 Check: 00 .. Name: ENSP00000331411/1-439 Len: 472 Check: 3561 Weight: 1.00 Name: ENSBTAP00000012159/1-431 Len: 472 Check: 6208 Weight: 1.00 Name: bmy_09019T0/1-322 Len: 472 Check: 8629 Weight: 1.00 Name: BACU017746/1-426 Len: 472 Check: 6017 Weight: 1.00 Name: ENSTTRP00000012479/1-412 Len: 472 Check: 4771 Weight: 1.00 // 1 50 ENSP00000331411/1-439 MVPSSPRALF LLLLILACPE PRASQ----- ---------- ---------- ENSBTAP00000012159/1-431 -----PLAPM LVVLMDIFSS PQ-------- ---------- ---------- bmy_09019T0/1-322 ---------- ---------- ---------- ---------- ---------- BACU017746/1-426 MVPNCPRALF LLLLFLACPE PRASQHICPG SLCKISVTCC WRASGPGEGG ENSTTRP00000012479/1-412 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000331411/1-439 --------NC LSKQQLLSAI RQLQQLLKGQ ETRFAEGIRH MKSRLAALQN ENSBTAP00000012159/1-431 --------NC LNKQQFLTAI RHLQQLLKGQ ETRFAEGVRH MKSRLAALQS bmy_09019T0/1-322 --------MI PSH------- ---------- ---------- ---------- BACU017746/1-426 EIEQCGDPNC PNKQQLLSAI RQLQQLLKGQ ETRFAEGVRH MKSRLVALQS ENSTTRP00000012479/1-412 --------NC LNKQQLLSAI RQLQQLLKGQ ETRFAEGVRH MKSRLVALQS 101 150 ENSP00000331411/1-439 SVGRVGPDAL PVSCPALNTP ADGRKFGSKY LVDHEVHFTC NPGFRLVGPS ENSBTAP00000012159/1-431 SVSKAGPDTP PVSCPALNAP LDGRKFGSKY LVDHEVHFTC NPGFRLVGPS bmy_09019T0/1-322 ---------- ---------- ---------- ---------- ---------- BACU017746/1-426 SVSRAGPDTP PVSCPALSTP PDGRKFGSKY LVDHEVHFTC NAGFRLVGPS ENSTTRP00000012479/1-412 SVSRAGPDTP PVSCPALSTP PDGRKFGSKY LVDHEVHFTC NAGFRLVGPS 151 200 ENSP00000331411/1-439 SVVCLPNGTW TGEQPHCRGI SECSSQPCQN GGTCVEGVNQ YRCICPPGRT ENSBTAP00000012159/1-431 SVVCLPNGTW TGEQPRCKDI SECSSQPCQN GGTCVEGVNQ YKCICPPGRT bmy_09019T0/1-322 -----PTHTH THTSQVQPDI SECSSQPCQN GGTCVEGVNQ YKCICPPGRT BACU017746/1-426 SVVCLPNGTW TGEQPRCRDI SECSSQPCQN GGTCVEGVNQ YKCICPPGRT ENSTTRP00000012479/1-412 SVVCLPNGTW TGEQPRCRDI SECSSQPCQN GGTCVEGVNQ YKCICPPGRT 201 250 ENSP00000331411/1-439 GNRCQHQAQT AAPEGSVAGD SAFSRAPRCA QVERAQHCSC EAGFHLSGAA ENSBTAP00000012159/1-431 GSRCQHQAQT AAPEGSEAGD AAFSRAPRCA QVERTQHCSC EAGFHLSGAA bmy_09019T0/1-322 GSRCQHQAQT VALEGSEAGD PAFSRAPRCA QVERTQHCSC EAGFHLSGAA BACU017746/1-426 GSRCQHQAQT ---------- ---------- ---------- ---------- ENSTTRP00000012479/1-412 GSRCQHHAQT VALEGSEAGD PAFSRAPRCA QVERTQHCSC EAGFHLSGAA 251 300 ENSP00000331411/1-439 GDSVCQDVNE CELYGQEGRP RLCMHACVNT PGSYRCTCPG GYRTLADGKS ENSBTAP00000012159/1-431 ADSVCQDVNE CELYGQEGRP QLCMHACVNT PGSYRCVCPS GYRTLADGKS bmy_09019T0/1-322 GDSVCQDVNE CELYGQEGRS RLCMHACVNT PGSYRCACPS GYRTLADGKS BACU017746/1-426 ------DVNE CELYGQEGRS RLCMHACVNT PGSYRCACPS GYRTLADGKS ENSTTRP00000012479/1-412 GDSVCQDVNE CELYGQEGRS RLCMHACVNT PGSYRCACPS GYRTLADGKS 301 350 ENSP00000331411/1-439 CEDVDECVGL QPVCPQGTTC INTGGSFQCV SPECPEGSGN VSYVKTSPFQ ENSBTAP00000012159/1-431 CEDVDECVSA QPVCPRGTVC INTGGGFQCV SPECPEGSSN VSYVKTSPFQ bmy_09019T0/1-322 CEDVDECVSP QHVCPRGTVC INTGGGFQCV SPECPEGSGN VSYVKTSPFQ BACU017746/1-426 CEDVDECVSP QHVCPRGTVC INTGGGFQCV SPECPEGSGN VSYVKTSPFQ ENSTTRP00000012479/1-412 CEDVDECVSP QHVCPRGTVC INTGGGFQCV SPECPEGSGN VSYVKTSPFQ 351 400 ENSP00000331411/1-439 CERNPCPMDS RPCRHLPKTI SFHYLSLPSN LKTPITLFRM ATASAPGRAG ENSBTAP00000012159/1-431 CERNPCPMDS RPCRHMPKTI SFHYLSLPSN LKTPITLFRM ATASAPGRPG bmy_09019T0/1-322 CERNPCPMDS RPCRHMPKTI SFHYLSLPSN LKTPITLFRM ATASAPGRPG BACU017746/1-426 CERNPCPMDS RPCRHMPKTI SFHYLSLPSN LKTPITLFRM ATASAPGRPG ENSTTRP00000012479/1-412 CERNPCPMDS RPCRHMPKTI SFHYLSLPSN LKTPITLFRM ATASAPGRPG 401 450 ENSP00000331411/1-439 PNSLRFGIVG GNSRGHFVMQ RSDRQTGDLI LVQNLEGPQT LEVDVDMSEY ENSBTAP00000012159/1-431 PNSLRFGIVG GNSRGHFVMQ RSDRQTGELI LVQTLEGPQT LEVDVDMSEY bmy_09019T0/1-322 PNSLRFGIVG GNSRGHFVMQ RSDRQTGELI LVQTLEGPQT LEVDVDMSEY BACU017746/1-426 PNSLRFGIVG GNSRGHFVMQ RSDRQTGELI LVQTLEGPQT LEVDVDMSEY ENSTTRP00000012479/1-412 PNSLRFGIVG GNSRGHFVMQ RSDRQTGELI LVQTLEGPQT LEVDVDMS-Y 451 500 ENSP00000331411/1-439 LDRSFQANHV SKVTIFVSPY DF ENSBTAP00000012159/1-431 LDRSFQASHV SKVTIFVSPY DF bmy_09019T0/1-322 LDRSFQANHV SKVTIFVSPY DF BACU017746/1-426 LDRSFQANHV SKVTIFVSPY DF ENSTTRP00000012479/1-412 LDRSFQANHV S-VTIFVSPY DF