KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:53 2014 Check: 00 .. Name: ENSTTRP00000013267/1-1067 Len: 1070 Check: 6999 Weight: 1.00 Name: BACU008799/1-967 Len: 1070 Check: 1016 Weight: 1.00 Name: bmy_07263T0/1-911 Len: 1070 Check: 2815 Weight: 1.00 Name: ENSP00000263967/1-1068 Len: 1070 Check: 8847 Weight: 1.00 Name: ENSBTAP00000012168/1-1068 Len: 1070 Check: 8628 Weight: 1.00 // 1 50 ENSTTRP00000013267/1-1067 MPPRPSSGEL WGIHLMPPRI LVECLLPNGM IVTLECLREA TLITIKHELF BACU008799/1-967 MPPRPSSGEL WGIHLMPPRI LVECLLPNGM IVTLECLREA TLITIKHELF bmy_07263T0/1-911 MPPRPSSGEL WGIHLMPPRI LVECLLPNGM IVTLECLREA TLITIKHELF ENSP00000263967/1-1068 MPPRPSSGEL WGIHLMPPRI LVECLLPNGM IVTLECLREA TLITIKHELF ENSBTAP00000012168/1-1068 MPPRPSSGEL WGIHLMPPRI LVECLLPNGM IVTLECLREA TLITIKHELF 51 100 ENSTTRP00000013267/1-1067 KEARKYPLHQ LLQDESSYIF VSVTQEAERE EFFDETRRLC DLRLFQPFLK BACU008799/1-967 KEARKYPLHQ LLQDESSYIF VSVTQEAERE EFFDETRRLC DLRLFQPFLK bmy_07263T0/1-911 KEARKYPLHQ LLQDESSYIF VSVTQEAERE EFFDETRRLC DLRLFQPFLK ENSP00000263967/1-1068 KEARKYPLHQ LLQDESSYIF VSVTQEAERE EFFDETRRLC DLRLFQPFLK ENSBTAP00000012168/1-1068 KEARKYPLHQ LLQDESSYIF VSVTQEAERE EFFDETRRLC DLRLFQPFLK 101 150 ENSTTRP00000013267/1-1067 VIEPVGNREE KILNREIGFA IGMPVCEFDM VKDPEVQDFR RNILNVCKEA BACU008799/1-967 VIEPVGNREE KILNREIGFA IGMPVCEFDM VKDPEVQDF- ---------- bmy_07263T0/1-911 VIEPVGNREE KILNREIGFA IGMPVCEFDM VKDPEVQDFR RNILNVCKEA ENSP00000263967/1-1068 VIEPVGNREE KILNREIGFA IGMPVCEFDM VKDPEVQDFR RNILNVCKEA ENSBTAP00000012168/1-1068 VIEPVGNREE KILNREIGFA IGMPVCEFDM VKDPEVQDFR RNILNVCKEA 151 200 ENSTTRP00000013267/1-1067 VDLRDLNSPH SRAMYVYPPN VESSPELPKH IYNKLDKGQI IVVIWVIVSP BACU008799/1-967 ---EEIFSMF VKKLWI---- ------LGIS IHRIVEQWQI IVVIWVIVSP bmy_07263T0/1-911 VDLRDLNSPH SRAMYVYPPN VESSPELPKH IYNKLDKGQI IVVIWVIVSP ENSP00000263967/1-1068 VDLRDLNSPH SRAMYVYPPN VESSPELPKH IYNKLDKGQI IVVIWVIVSP ENSBTAP00000012168/1-1068 VDLRDLNSPH SRAMYVYPPN VESSPELPKH IYNKLDKGQI IVVIWVIVSP 201 250 ENSTTRP00000013267/1-1067 NNDKQKYTLK INHDCVPEQV IAEAIRKKTR SMLLSSEQLK LCVLEYQGKY BACU008799/1-967 NNDKQKYTLK INHDCVPEQV IAEAIRKKTR SMLLSSEQLK LCVLEYQGKY bmy_07263T0/1-911 NNDKQKYTLK INHDCVPEQV IAEAIRKKTR SMLLSSEQLK LCVLEYQGKY ENSP00000263967/1-1068 NNDKQKYTLK INHDCVPEQV IAEAIRKKTR SMLLSSEQLK LCVLEYQGKY ENSBTAP00000012168/1-1068 NNDKQKYTLK INHDCVPEQV IAEAIRKKTR SMLLSSEQLK LCVLEYQGKY 251 300 ENSTTRP00000013267/1-1067 ILKVCGCDEY FLEKYPLSQY --KYIRSCIM LGRMPNLMLM AKESLYSQLP BACU008799/1-967 ILKVCGCDEY FLEKYPLSQY --KYIRSCIM LGRMPNLMLM AKESLYSQLP bmy_07263T0/1-911 ILKVCGCDEY FLEKYPLSQY KLKYIRSCIM LGRMPNLMLM AKESLYSQLP ENSP00000263967/1-1068 ILKVCGCDEY FLEKYPLSQY --KYIRSCIM LGRMPNLMLM AKESLYSQLP ENSBTAP00000012168/1-1068 ILKVCGCDEY FLEKYPLSQY --KYIRSCIM LGRMPNLMLM AKESLYSQLP 301 350 ENSTTRP00000013267/1-1067 MDCFTMPSYS RRISTATPYM NGETSTKSLW VINSALRIKI LCATYVNVNI BACU008799/1-967 MDCFTMPSYS RRISTATPYM NGETSTKSLW VINSALRIKI LCATYVNVNI bmy_07263T0/1-911 MDCFTMPSYS RRISTATPYM NGETSTKSLW VINSALRIKI LCATYVNVNI ENSP00000263967/1-1068 MDCFTMPSYS RRISTATPYM NGETSTKSLW VINSALRIKI LCATYVNVNI ENSBTAP00000012168/1-1068 MDCFTMPSYS RRISTATPYM NGETSTKSLW VINSALRIKI LCATYVNVNI 351 400 ENSTTRP00000013267/1-1067 RDIDKIYVRT GIYHGGEPLC DNVNTQRVPC SNPRWNEWLN YDIYIPDLPR BACU008799/1-967 RDIDK----- ---------- ---------- ---------- ---------- bmy_07263T0/1-911 RDIDK----- ---------- ---------- ---------- ---------- ENSP00000263967/1-1068 RDIDKIYVRT GIYHGGEPLC DNVNTQRVPC SNPRWNEWLN YDIYIPDLPR ENSBTAP00000012168/1-1068 RDIDKIYVRT GIYHGGEPLC DNVNTQRVPC SNPRWNEWLN YDIYIPDLPR 401 450 ENSTTRP00000013267/1-1067 AARLCLSICS VKGRKGAKEE HCPLAWGNIN LFDYTDTLVS GKMALNLWPV BACU008799/1-967 ---------- ---------E HCPLAWGNIN LFDYTDTLVS GKMALNLWPV bmy_07263T0/1-911 ---------- ---------E HCPLAWGNIN LFDYTDTLVS GKMALNLWPV ENSP00000263967/1-1068 AARLCLSICS VKGRKGAKEE HCPLAWGNIN LFDYTDTLVS GKMALNLWPV ENSBTAP00000012168/1-1068 AARLCLSICS VKGRKGAKEE HCPLAWGNIN LFDYTDTLVS GKMALNLWPV 451 500 ENSTTRP00000013267/1-1067 PHGLEDLLNP IGVTGSNPNK ETPCLELEFD WFSSVVKFPD MSVIEEHANW BACU008799/1-967 PHGLEDLLNP IGVTGSNPNK ---------- ---SVVKFPD MSVIEEHANW bmy_07263T0/1-911 PHGLEDLLNP IGVTGSNPNK ETPCLELEFD WFSSVVKFPD MSVIEEHANW ENSP00000263967/1-1068 PHGLEDLLNP IGVTGSNPNK ETPCLELEFD WFSSVVKFPD MSVIEEHANW ENSBTAP00000012168/1-1068 PHGLEDLLNP IGVTGSNPNK ETPCLELEFD WFSSVVKFPD MSVIEEHANW 501 550 ENSTTRP00000013267/1-1067 SVSREAGFSY SHAGLSNRLA RDNELRENDK EQLRAICTRD PLSEITEQEK BACU008799/1-967 SVSREAGFSY SYAGLSNRLA RDNELRENDK EQLRAICTRD PLSEITEQEK bmy_07263T0/1-911 SVSREAGFSY SHAGLSNRLA RDNELRENDK EQLRAICTRD PLSEITEQEK ENSP00000263967/1-1068 SVSREAGFSY SHAGLSNRLA RDNELRENDK EQLKAISTRD PLSEITEQEK ENSBTAP00000012168/1-1068 SVSREAGFSY SHAGLSNRLA RDNELRENDK EQLRAICTRD PLSEITEQEK 551 600 ENSTTRP00000013267/1-1067 DFLWSHRHYC VTIPEILPKL LLSVKWNSRD EVAQMYCLVK DWPPIKPEQA BACU008799/1-967 DFLWSHRHYC VTIPEILPKL LLSVKWNSRD EVAQMYCLVK DWPPIKPEQA bmy_07263T0/1-911 DFLWSHRHYC VTIPEILPKL LLSVKWNSRD EVAQMYCLVK DWPPIKPEQA ENSP00000263967/1-1068 DFLWSHRHYC VTIPEILPKL LLSVKWNSRD EVAQMYCLVK DWPPIKPEQA ENSBTAP00000012168/1-1068 DFLWSHRHYC VTIPEILPKL LLSVKWNSRD EVAQMYCLVK DWPPIKPEQA 601 650 ENSTTRP00000013267/1-1067 MELLDCNYPD PMVRGFAVRC LEKYLTDDKL SQYLIQLVQX XXXXXXXXXX BACU008799/1-967 MELLDCNYPD PMVRGFAVRC LEKYLTDDKL SQYLIQLVQV LKYEQYLDNL bmy_07263T0/1-911 MELLDCNYPD PMVRGFAVRC LEKYLTDDKL SQYLIQLVQV LKYEQYLDNL ENSP00000263967/1-1068 MELLDCNYPD PMVRGFAVRC LEKYLTDDKL SQYLIQLVQV LKYEQYLDNL ENSBTAP00000012168/1-1068 MELLDCNYPD PMVRGFAVRC LEKYLTDDKL SQYLIQLVQV LKYEQYLDNL 651 700 ENSTTRP00000013267/1-1067 XXXXXXXXXX XXXXXXXXXX XXXXSEMHNK TVSQRFGLLL ESYCRACGMY BACU008799/1-967 LVRFLLKKAL TNQRIGHFFF WHLKSEMHNK TVSQRFGLLL ESYCRACGMY bmy_07263T0/1-911 L--------- ---------- ---------- ---------- ---------- ENSP00000263967/1-1068 LVRFLLKKAL TNQRIGHFFF WHLKSEMHNK TVSQRFGLLL ESYCRACGMY ENSBTAP00000012168/1-1068 LVRFLLKKAL TNQRIGHFFF WHLKSEMHNK TVSQRFGLLL ESYCRACGMY 701 750 ENSTTRP00000013267/1-1067 LKHLNRQVEA MEKLINLTDI LKQEKKD-TQ KVQMKFLVEQ MRRPDFMDAL BACU008799/1-967 LKHLNRQVEA MEKLINLTDI LKQEKKDETQ KVQMKFLVEQ MRRPDFMDAL bmy_07263T0/1-911 -------VEA MEKLINLTDI LKQEKKDETQ KVQMKFLVEQ MRRPDFMDAL ENSP00000263967/1-1068 LKHLNRQVEA MEKLINLTDI LKQEKKDETQ KVQMKFLVEQ MRRPDFMDAL ENSBTAP00000012168/1-1068 LKHLNRQVEA MEKLINLTDI LKQEKKDETQ KVQMKFLVEQ MRRPDFMDAL 751 800 ENSTTRP00000013267/1-1067 QGFLSPLNPA HQLGNLRLEE CRIMSSAKRP LWLNWENPDI MSELLFQNNE BACU008799/1-967 QGFLSPLNPA HQLGNLRLEE CRIMSSAKRP LWLNWENPDI MSELLFQNNE bmy_07263T0/1-911 QGFLSPLNPA HQLGNLRLEE CRIMSSAKRP LWLNWENPDI MSELLFQNNE ENSP00000263967/1-1068 QGFLSPLNPA HQLGNLRLEE CRIMSSAKRP LWLNWENPDI MSELLFQNNE ENSBTAP00000012168/1-1068 QGFLSPLNPA HQLGNLRLEE CRIMSSAKRP LWLNWENPDI MSELLFQNNE 801 850 ENSTTRP00000013267/1-1067 IIFKNGDDLR QDMLTLQIIR IMENIWQNQG LDLRMLPYGC LSIGDCVGLI BACU008799/1-967 IIFKNGDDLR QDMLTLQIIR IMENIWQNQG LDLRMLPYGC LSIGDCVGLI bmy_07263T0/1-911 IIFKNGDDLR QDMLTLQIIR IMENIWQNQG LDLRMLPYGC LSIGDCVGLI ENSP00000263967/1-1068 IIFKNGDDLR QDMLTLQIIR IMENIWQNQG LDLRMLPYGC LSIGDCVGLI ENSBTAP00000012168/1-1068 IIFKNGDDLR QDMLTLQIIR IMENIWQNQG LDLRMLPYGC LSIGDCVGLI 851 900 ENSTTRP00000013267/1-1067 EVVRNSHTIM QIQCKGGLKG ALQFNSHTLH QWLKDKNKGE IYDAAIDLFT BACU008799/1-967 EVVRNSHTIM QIQCKGGLKG ALQFNSHTLH QWLKDKNKGE IYDAAIDLFT bmy_07263T0/1-911 EVVRNSHTIM QIQCKGGLKG ALQFNSHTLH QWLKDKNKGE IYDAAIDLFT ENSP00000263967/1-1068 EVVRNSHTIM QIQCKGGLKG ALQFNSHTLH QWLKDKNKGE IYDAAIDLFT ENSBTAP00000012168/1-1068 EVVRNSHTIM QIQCKGGLKG ALQFNSHTLH QWLKDKNKGE IYDAAIDLFT 901 950 ENSTTRP00000013267/1-1067 RSCAGYCVAT FILGIGDRHN SNIMVKDDGQ LFHIDFGHFL DHKKKKFGYK BACU008799/1-967 RSCAGYCVAT FILGIGDRHN SNIMVKDDGQ LFHIDFGHFL DHKKKKFGYK bmy_07263T0/1-911 RSCAGYCVAT FILGIGDRHN ---------- ----NFGHFL DHKKKKFGYK ENSP00000263967/1-1068 RSCAGYCVAT FILGIGDRHN SNIMVKDDGQ LFHIDFGHFL DHKKKKFGYK ENSBTAP00000012168/1-1068 RSCAGYCVAT FILGIGDRHN SNIMVKDDGQ LFHIDFGHFL DHKKKKFGYK 951 1000 ENSTTRP00000013267/1-1067 RERVPFVLTQ DFLIVISKGA QECTKTREFE RFQEMCYKAY LAIRQHANLF BACU008799/1-967 RERVPFVLTQ DFLIVISKGA QECTKTREFE RFQEMCYKAY LAIRQHANLF bmy_07263T0/1-911 RE-------- ---LKEPKNA QRQENLR--- ---------- -AIRQHANLF ENSP00000263967/1-1068 RERVPFVLTQ DFLIVISKGA QECTKTREFE RFQEMCYKAY LAIRQHANLF ENSBTAP00000012168/1-1068 RERVPFVLTQ DFLIVISKGA QECTKTREFE RFQEMCYKAY LAIRQHANLF 1001 1050 ENSTTRP00000013267/1-1067 INLFSMMLGS GMPELQSFDD IAYIRKTLAL DKTEQEALEY FMKQMNDAHH BACU008799/1-967 INLFSMMLGS GMPELQSFDD IAYIRKTLAL DKTEQEALEY FMKQMNDAHH bmy_07263T0/1-911 INLFSMMLGS GMPELQSFDD IAYIRKTLAL DKTEQEALEY FMKQMNDAHH ENSP00000263967/1-1068 INLFSMMLGS GMPELQSFDD IAYIRKTLAL DKTEQEALEY FMKQMNDAHH ENSBTAP00000012168/1-1068 INLFSMMLGS GMPELQSFDD IAYIRKTLAL DKTEQEALEY FMKQMNDAHH 1051 1100 ENSTTRP00000013267/1-1067 GGWTTKMDWI FHTIKQHALN BACU008799/1-967 GGWTTKMDWI FHTIKQHALN bmy_07263T0/1-911 GGWTTKMDWI FHTIKQHALN ENSP00000263967/1-1068 GGWTTKMDWI FHTIKQHALN ENSBTAP00000012168/1-1068 GGWTTKMDWI FHTIKQHALN