KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:55 2014 Check: 00 .. Name: BACU014698/1-251 Len: 309 Check: 7118 Weight: 1.00 Name: bmy_08184T0/1-259 Len: 309 Check: 3688 Weight: 1.00 Name: ENSP00000221138/1-309 Len: 309 Check: 6130 Weight: 1.00 Name: ENSTTRP00000000094/1-285 Len: 309 Check: 2735 Weight: 1.00 Name: ENSBTAP00000012182/1-309 Len: 309 Check: 6121 Weight: 1.00 // 1 50 BACU014698/1-251 MDDKAFTKEL DQWVEQLNEC KQLSENQVWT LCEKAKEILT KESNVQEVRC bmy_08184T0/1-259 ---------- ---------- ---------M LCKKAKEILT KESNVQEVRC ENSP00000221138/1-309 MDDKAFTKEL DQWVEQLNEC KQLNENQVRT LCEKAKEILT KESNVQEVRC ENSTTRP00000000094/1-285 MDDKAFTKEL DQWVEQLNEC KQLNENQVRT LCEKAKEILT KESNVQEVRC ENSBTAP00000012182/1-309 MDDKAFTKDL DQWVEQLNEC KQLNENQVRT LCEKAKEILT KESNVQEVRC 51 100 BACU014698/1-251 PVTICQDVHG QFHDLMELFK IGGKSPVTNY LFMGDYGDRG YYSVETVTLL bmy_08184T0/1-259 PVTICQDVHG QFHDLMERFK IGGKSPDTNY LFMGDYVDRG YYSVETVTLL ENSP00000221138/1-309 PVTVCGDVHG QFHDLMELFR IGGKSPDTNY LFMGDYVDRG YYSVETVTLL ENSTTRP00000000094/1-285 PVTVCGDVHG QFHDLMELFR IGGKSPDTNY LFMGDYVDRG YYSVETVTLL ENSBTAP00000012182/1-309 PVTVCGDVHG QFHDLMELFR IGGKSPDTNY LFMGDYVDRG YYSVETVTLL 101 150 BACU014698/1-251 VALKVCHPEH ITRLRRNHES RQVTQVYGFY DECLRKYGNA DVWKYFTDLF bmy_08184T0/1-259 VALKVRYPEH MTRLRGNHES RQVTQVYGFY DECLRKYGNA BVWKYFTDLF ENSP00000221138/1-309 VALKVRYPER ITILRGNHES RQITQVYGFY DECLRKYGNA NVWKYFTDLF ENSTTRP00000000094/1-285 VALKVRYPER ITILRGNHES RQITQVYGFY DECLRKYGNA NVWKYFTDLF ENSBTAP00000012182/1-309 VALKVRYPER ITILRGNHES RQITQVYGFY DECLRKYGNA NVWKYFTDLF 151 200 BACU014698/1-251 DYLPLIALVD GQIFYLHGGL SPSIDTLDHI RALDRLQEVP HAGPMCDLLW bmy_08184T0/1-259 DHLPLTALVD GQIFCLHGGL SPSIDTLDHI RALDRLQEVP HAGPMCDLLW ENSP00000221138/1-309 DYLPLTALVD GQIFCLHGGL SPSIDTLDHI RALDRLQEVP HEGPMCDLLW ENSTTRP00000000094/1-285 DYLPLTALVD GQIFCLHGGL SPSIDTLDHI RALDRLQEVP HEGPMCDLLW ENSBTAP00000012182/1-309 DYLPLTALVD GQIFCLHGGL SPSIDTLDHI RALDRLQEVP HEGPMCDLLW 201 250 BACU014698/1-251 SDPDDHGGWG TSPLRAGYTF GQDISETFNH ANGLTLVSCA HQLVTVIY-- bmy_08184T0/1-259 SDPDDRGGWG ISPRGAGYTF GQDISETFNH ANRLTLVSRA HQLVTEGYNW ENSP00000221138/1-309 SDPDDRGGWG ISPRGAGYTF GQDISETFNH ANGLTLVSRA HQLVMEGYNW ENSTTRP00000000094/1-285 SDPDDRGGWG ISPRGAGYTF GQDISETFNH ANGLTLVSRA HQLVMEGYNW ENSBTAP00000012182/1-309 SDPDDRGGWG ISPRGAGYTF GQDISETFNH ANGLTLVSRA HQLVMEGYNW 251 300 BACU014698/1-251 ---------- ---------- ---------- --VFL----- ---------- bmy_08184T0/1-259 CHDQNVVTIF SASNYCYRCG NQAAIMELDD TEIFL----- -------PSV ENSP00000221138/1-309 CHDRNVVTIF SAPNYCYRCG NQAAIMELDD TLKYSFLQFD PAPRRGEPHV ENSTTRP00000000094/1-285 CHDRNVVTIF SAPNYCYRCG NQAAIMELDD TLKYS----- ---------- ENSBTAP00000012182/1-309 CHDRNVVTIF SAPNYCYRCG NQAAIMELDD TLKYSFLQFD PAPRRGEPHV 301 350 BACU014698/1-251 --------- bmy_08184T0/1-259 --------- ENSP00000221138/1-309 TRRTPDYFL ENSTTRP00000000094/1-285 --------- ENSBTAP00000012182/1-309 TRRTPDYFL