KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:59 2014 Check: 00 .. Name: bmy_12588T0/1-461 Len: 580 Check: 5187 Weight: 1.00 Name: BACU001703/1-305 Len: 580 Check: 2995 Weight: 1.00 Name: ENSBTAP00000012207/1-541 Len: 580 Check: 9531 Weight: 1.00 Name: ENSP00000356331/1-541 Len: 580 Check: 9413 Weight: 1.00 Name: ENSTTRP00000003053/1-540 Len: 580 Check: 9185 Weight: 1.00 // 1 50 bmy_12588T0/1-461 RCLLLAVRGR LGSRKPGRGS EVLTAAPEAA EARSCRRARK QPPGRPLLLP BACU001703/1-305 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012207/1-541 ---------- ---------- --MSSNSDTG DLQESLKHGL TPIGARLPDG ENSP00000356331/1-541 ---------- ---------- --MSSNSDTG DLQESLKHGL TPIGAGLPDR ENSTTRP00000003053/1-540 ---------- ---------- --MSSNSDTG DLQESLKHGL TPIGAGLPDR 51 100 bmy_12588T0/1-461 GGVEAVLPAS RCWASGPART PYPARGRLVM LPKVETEALG LARSHGEQGQ BACU001703/1-305 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012207/1-541 HG-------- ---------P LAPARGRLVM LPKVETEALG LARSHGDQGQ ENSP00000356331/1-541 HG-------- ---------S PIPARGRLVM LPKVETEALG LARSHGEQGQ ENSTTRP00000003053/1-540 HG-------- ---------- PSPARGRLVM LPKVETEALG LARSHGEQGQ 101 150 bmy_12588T0/1-461 MPENMQVSQF KMVNYSYDED LEELCPVCGD KVSGYHYGLL TCESCKGFFK BACU001703/1-305 ---------- -MVNYSYDED LEELCPVCGD KVSGYHYGLL TCESCKGFFK ENSBTAP00000012207/1-541 MPENMQVSPF KMVNYSYDED LEELCPVCGD KVSGYHYGLL TCESCKGFFK ENSP00000356331/1-541 MPENMQVSQF KMVNYSYDED LEELCPVCGD KVSGYHYGLL TCESCKGFFK ENSTTRP00000003053/1-540 MPENMQVSQF KMVNYSYDED LEELCPVCGD KVSGYHYGLL TCESCKGFFK 151 200 bmy_12588T0/1-461 RTVQNNKRYT CIENQNCQID KTQRKRCPYC RFQKCLSVGM KLEAVRADRM BACU001703/1-305 RTVQNNKRYT CIENQNCQID KTQRKRCPYC RFQKCLSVGM KLEAVRADRM ENSBTAP00000012207/1-541 RTVQNNKRYT CIENQNCQID KTQRKRCPYC RFQKCLSVGM KLEAVRADRM ENSP00000356331/1-541 RTVQNNKRYT CIENQNCQID KTQRKRCPYC RFQKCLSVGM KLEAVRADRM ENSTTRP00000003053/1-540 RTVQNNKRYT CIENQNCQID KTQRKRCPYC RFQKCLSVGM KLEAVRADRM 201 250 bmy_12588T0/1-461 RGGRNKFGPM YKRDRALKQQ KKALIRANGL KLEAMSQVIQ AMPSELSISS BACU001703/1-305 RGGRNKFGPM YKRDRALKQQ KKALIRANGL KLEAMSQVIQ AMPSELSISS ENSBTAP00000012207/1-541 RGGRNKFGPM YKRDRALKQQ KKALIRANGL KLEAMSQVIQ AMPPELSISS ENSP00000356331/1-541 RGGRNKFGPM YKRDRALKQQ KKALIRANGL KLEAMSQVIQ AMPSDLTISS ENSTTRP00000003053/1-540 RGGRNKFGPM YKRDRALKQQ KKALIRANGL KLEAMSQVIQ AMPSELSISS 251 300 bmy_12588T0/1-461 AIQNIHSVSK GLPLNHAALP PTDYDRSPFV TSPISMTMPP PGSLQGYQTY BACU001703/1-305 AIQNIHSVSK GLPLNHAALP PTDYDRSPFV TSPISMTMPP PGSLQGYQTY ENSBTAP00000012207/1-541 AIQNIHSASK GLPLNHAALP PTDYDRSPFV TSPISMAMPP HGSLPGYQTY ENSP00000356331/1-541 AIQNIHSASK GLPLNHAALP PTDYDRSPFV TSPISMTMPP HGSLQGYQTY ENSTTRP00000003053/1-540 AIQNIHSVSK GLPLNHAALP PTDYDRSPFV TSPISMTMPP PGSLQGYQPY 301 350 bmy_12588T0/1-461 SHFPSRAIKS EYPDPYTSSP ESILGYSYLD SYQTSSPASM PHLILELLKC BACU001703/1-305 SHFPSRAIKS EYPDPYTSSP ESILGYSYLD TYQTSSPASM PHLILELLKC ENSBTAP00000012207/1-541 SHFPSRAIKS EYPDPYTSSP ESIMGYSYVD SYQTSSPASI PHLILELLKC ENSP00000356331/1-541 GHFPSRAIKS EYPDPYTSSP ESIMGYSYMD SYQTSSPASI PHLILELLKC ENSTTRP00000003053/1-540 SHFPSRAIKS EYPDPYTSSP ESIMGYSYMD SYQTSSPASM PHLILELLRC 351 400 bmy_12588T0/1-461 EPDEPQVQAK IMAYLQQEQA SRSKHERLST FGLMCKMADQ TLFSIVEWAR BACU001703/1-305 EPDEPQVQAK IMAYLQQEQA SRSKHERLST FGLMCKMADQ TLFSIVEWAR ENSBTAP00000012207/1-541 EPDEPQVQAK IMAYLQQEQA NRGKHERLST FGLMCKMADQ TLFSIVEWAR ENSP00000356331/1-541 EPDEPQVQAK IMAYLQQEQA NRSKHEKLST FGLMCKMADQ TLFSIVEWAR ENSTTRP00000003053/1-540 EPDEPQVQAK IMAYLQQEQA NRSKHERLST FGLMCKMADQ TLFSIVEWAR 401 450 bmy_12588T0/1-461 SSVFFRELKV R--------- ---------- ---------- ---------- BACU001703/1-305 SSVFFRELKV H--------- ---------- ---------- ---------- ENSBTAP00000012207/1-541 SSVFFRELKV DDQMKLLQNC WSELLILDHI YRQVVHGKEG SIFLVTGQQV ENSP00000356331/1-541 SSIFFRELKV DDQMKLLQNC WSELLILDHI YRQVVHGKEG SIFLVTGQQV ENSTTRP00000003053/1-540 SSVFFRELKV DDQMKLLQNC WSELLILDHI YRQVVHGKEG SIFLVTGQQV 451 500 bmy_12588T0/1-461 ---------- ---------- ----ASPRGL ELPFRE---- ---------- BACU001703/1-305 ---------- ---------- ----ASLGG- ---------- ---------- ENSBTAP00000012207/1-541 DYSVIASQAG ATLNNLMSHA QELVAKLRSL QFDQREFVCL KFLVLFSLDV ENSP00000356331/1-541 DYSIIASQAG ATLNNLMSHA QELVAKLRSL QFDQREFVCL KFLVLFSLDV ENSTTRP00000003053/1-540 DYSIIASQAG ATLNNLMSHA QELVAKLRSL QFDQREFVCL KFLVLFSLDV 501 550 bmy_12588T0/1-461 ---------- ---------- ---------- ---------T RLCGPCLIGS BACU001703/1-305 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012207/1-541 KNLENFQLVE GVQEQVNAAL LDYTVCNYPQ QTEKFGQLLL RLPEIRALSM ENSP00000356331/1-541 KNLENFQLVE GVQEQVNAAL LDYTMCNYPQ QTEKFGQLLL RLPEIRAISM ENSTTRP00000003053/1-540 KNLENFQLVE GVQEQVNAAL LDYTMCNYPQ QTEKFGQLLL RLPEIRAMSV 551 600 bmy_12588T0/1-461 WCGKHVFLTF LLCKMMFSTL TSELFAA--- BACU001703/1-305 ---------- ---------- ---------- ENSBTAP00000012207/1-541 QAEEYLYYKH LNGDVPYNNL LIEMLHAKRA ENSP00000356331/1-541 QAEEYLYYKH LNGDVPYNNL LIEMLHAKRA ENSTTRP00000003053/1-540 QAEEYLYYKH LNGDVPYNNL LIEMLHAKRL