KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:46:06 2014 Check: 00 .. Name: ENSP00000307126/1-323 Len: 326 Check: 9584 Weight: 1.00 Name: ENSBTAP00000012243/1-323 Len: 326 Check: 7891 Weight: 1.00 Name: ENSTTRP00000001736/1-322 Len: 326 Check: 8790 Weight: 1.00 Name: bmy_02540T0/1-316 Len: 326 Check: 1703 Weight: 1.00 Name: BACU007690/1-323 Len: 326 Check: 6222 Weight: 1.00 // 1 50 ENSP00000307126/1-323 MGNSASRSDF EWVYTDQPHT QRRKEIL--- AKYPAIKALM RPDPRLKWAV ENSBTAP00000012243/1-323 MGNRAGRSDF EWVYTDQPHT QRRKEML--- AKYPAIKALM RPDPYLKWTV ENSTTRP00000001736/1-322 MGNSAGRSDF EWVYTDQPHT QRRKEML--- AKYPAIKALM RPDPHLKWLV bmy_02540T0/1-316 ---------- MYLGPTRPVP PSPSLLVLPA AKYPAIKALM RPDPHLKWMV BACU007690/1-323 MGNSAGRSDF EWVYTEQPHT QRRKEML--- AKYPAIKALM RPDPHLKWMV 51 100 ENSP00000307126/1-323 LVLVLVQMLA CWLVRGLAWR WLLFWAYAFG GCVNHSLTLA IHDISHNAAF ENSBTAP00000012243/1-323 TAMVLAQLLA CWLAQGLAWR WLFFWAYAFG GCVNHSLTLA IHDISHNTAF ENSTTRP00000001736/1-322 LGLVLAQLLA CWLVRGLAWR WLLFWAYAFG GCVNHALTLA IHDISHNTAF bmy_02540T0/1-316 LGMVLAQLLA CWLVRGLAWR WLLFWAYAFG GCVNHSLTLA IHDISHNTAF BACU007690/1-323 LGMVLAQLLA CWLVRGLAWR WLLFWAYAFG GCVNHSLTLA IHDISHNTAF 101 150 ENSP00000307126/1-323 GTGRAARNRW LAVFANLPVG VPYAASFKKY HVDHHRYLGG DGLDVDVPTR ENSBTAP00000012243/1-323 GTGRPSRNRW FAIFANLPVG LPYAASFKKY HVDHHRYLGG DGLDVDVPTY ENSTTRP00000001736/1-322 GTGHPAHNRW FAVFANLPLG VPYASSFKKY HVDHHRYLGG DGLDVDVPTR bmy_02540T0/1-316 GTGHPAHNRW FAIFANLPLG VPYASSFKKY HVDHHRYLGG DGLDVDVPTR BACU007690/1-323 GTGHPAHNRW FAVFANLPLG VPYASSFKKY HVDHHRYLGG DGLDVDVPTR 151 200 ENSP00000307126/1-323 LEGWFFCTPA RKLLWLVLQP FFYSLRPLCV HPKAVTRMEV LNTLVQLAAD ENSBTAP00000012243/1-323 FEGRLFCTPA RKLLWLALQP FFYTLRPLCV HPKAMTRMEL CNTLVQLAAD ENSTTRP00000001736/1-322 LEGWLFCTPA RKLLWLALQP FFYSLRPLCV HPKAMTRMEV FNALAQLAAN bmy_02540T0/1-316 LEGWLFCTPA RKLLWLALQP FFYSLRPLCV HPKAMTRMEV FNALAQLAAN BACU007690/1-323 LEGWLFCTPA RKLLWLALQP FFYSLRPLCV NPKAMTRMEV FNALAQLAAN 201 250 ENSP00000307126/1-323 LAIFALWGLK PVVYLLASSF LGLGLHPISG HFVAEHYMFL KGHETYSYYG ENSBTAP00000012243/1-323 ATIYALWGLK PMVYLLASSL LGLGLHPISG HFVAEHYMFL KGHETYSYYG ENSTTRP00000001736/1-322 ATIFTLWGPK PMVYLLASSL LGLGLHPISG HFVAEHYMFL KGHETYSYYG bmy_02540T0/1-316 ATIFTLWGLK PMVYLLASSL LGLGLHPISG HFVAEHYMFL KGHETYSYYG BACU007690/1-323 ATIFTLWGLK PMVYLLASSL LGLGLHPISG HFVAEHYMFL KGHETYSYYG 251 300 ENSP00000307126/1-323 PLNWITFNVG YHVEHHDFPS IPGYNLPLVR KIAPEYYDHL PQHHSWVKVL ENSBTAP00000012243/1-323 PLNWITFNVG YHMEHHDFPS IPSCNLPLVR KIAPEYYDHL PQHHSWVKVL ENSTTRP00000001736/1-322 PLNWITFNVG YHMEHHXXXX XXXXXXXXVR KIAPEYYDHL PQHYSWVKVL bmy_02540T0/1-316 PLNWITFNVG YHMEHHDFPS IPSCNLPLVR KIAPEYYDHL PQHYSWVKVL BACU007690/1-323 PLNWITFNVG YHVEHHDFPS IPSCNLPLVR KIAPEYYDHL PQHHSWVKVL 301 350 ENSP00000307126/1-323 WDFVFEDSLG PYARVKRVYR LAKDGL ENSBTAP00000012243/1-323 WDFVFDDSLG PFARVKRVCK LAENRL ENSTTRP00000001736/1-322 WDFVSEDSLG PYARVKRVCK L-EDGL bmy_02540T0/1-316 WDFVSKDSLG PYARVKRVCK LAEDGL BACU007690/1-323 WDFVSKDSLG PYARVKRVCK LAEDGL