KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:46:09 2014 Check: 00 .. Name: ENSTTRP00000003523/1-196 Len: 251 Check: 6710 Weight: 1.00 Name: ENSP00000475168/1-196 Len: 251 Check: 8918 Weight: 1.00 Name: ENSBTAP00000012259/1-196 Len: 251 Check: 7910 Weight: 1.00 Name: bmy_22294T0/1-251 Len: 251 Check: 9413 Weight: 1.00 Name: BACU001155/1-196 Len: 251 Check: 9292 Weight: 1.00 // 1 50 ENSTTRP00000003523/1-196 ---------- ---------- ---MSEGDSV GDSVHGKPSV VYRFFTRLGQ ENSP00000475168/1-196 ---------- ---------- ---MSEGDSV GESVHGKPSV VYRFFTRLGQ ENSBTAP00000012259/1-196 ---------- ---------- ---MSEGDSV GDSVHGKPSV VYRFFTRLGQ bmy_22294T0/1-251 MGQLGPSGAA VFCLNGKGCC ASSMSEGDSV GDSVHGKPSV VYRFFTRLGQ BACU001155/1-196 ---------- ---------- ---MSEGDSV GDSVHGKPSV VYRFFTRLGQ 51 100 ENSTTRP00000003523/1-196 IYQSWLDKST PYTAVRWVVT LGLSFVYMIR VYLLQGWYIV TYALGIYHLN ENSP00000475168/1-196 IYQSWLDKST PYTAVRWVVT LGLSFVYMIR VYLLQGWYIV TYALGIYHLN ENSBTAP00000012259/1-196 IYQSWLDKST PHTAVRWVVT LGLSFIYMIR VYLLQGWYIV TYALGIYHLN bmy_22294T0/1-251 IYQSWLDKST PYTAVRWVVT LGLSFVYMIR VYLLQGWYIV TYALGIYHLN BACU001155/1-196 IYQSWLDKST PYTAVRWVVT LGLSFVYMIR VYLLQGWYIV TYALGIYHLN 101 150 ENSTTRP00000003523/1-196 LFIAFLSPKV DPSLMEDS-- ---------- ---------- ---------- ENSP00000475168/1-196 LFIAFLSPKV DPSLMEDS-- ---------- ---------- ---------- ENSBTAP00000012259/1-196 LFIAFLSPKV DPSLMEDS-- ---------- ---------- ---------- bmy_22294T0/1-251 LFIAFLSPKV DPSLMEDSGP FLTKAGFHGG FAWLTEATGP PMSPEGDGLK BACU001155/1-196 LFIAFLSPKV DPSLMEDS-- ---------- ---------- ---------- 151 200 ENSTTRP00000003523/1-196 DDGPSLPFPS VGEFRPFIFT LLDFLFXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000475168/1-196 DDGPSLPTKQ NEEFRPFIRR LPEFKFWHAA TKGILVAMVC TFFDAFNVPV ENSBTAP00000012259/1-196 DDGPSLPTKQ NEEFRPFIRR LPEFKFWHAA TKGILVAMVC TFFEAFNVPV bmy_22294T0/1-251 DDGPSLPTKQ NEEFRPFIRR LPEFKFWHAA TKGILVATVC TFFEAFNVPV BACU001155/1-196 DDGPSLPTKQ NEEFRPFIRR LPEFKFWHAA TKGILVAMVC TFFEAFNVPV 201 250 ENSTTRP00000003523/1-196 XXXXXXXXXX XXXXXXXXXX XXHMIKYRYI PFTHGKRTYK GKEDVGKTFA ENSP00000475168/1-196 FWPILVMYFI MLFCITMKRQ IKHMIKYRYI PFTHGKRRYR GKEDAGKAFA ENSBTAP00000012259/1-196 FWPILVMYFI MLFCITMKRQ IKHMIKYRYI PFTHGKRTYK GKEDAGKTFA bmy_22294T0/1-251 FWPILVMYFI MLFCITMKRQ IKHMIKYRYI PFTHGKRTYK GKEDAGKTFA BACU001155/1-196 FWPILVMYFI MLFCITMKRQ IKHMIKYRYI PFTHGKRTYK GKEDAGKTFA 251 300 ENSTTRP00000003523/1-196 S ENSP00000475168/1-196 S ENSBTAP00000012259/1-196 S bmy_22294T0/1-251 S BACU001155/1-196 S