KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:46:17 2014 Check: 00 .. Name: ENSP00000333779/1-448 Len: 457 Check: 8510 Weight: 1.00 Name: ENSBTAP00000012309/1-456 Len: 457 Check: 257 Weight: 1.00 Name: ENSTTRP00000014589/1-451 Len: 457 Check: 8056 Weight: 1.00 Name: bmy_15639T0/1-451 Len: 457 Check: 3291 Weight: 1.00 Name: BACU013922/1-451 Len: 457 Check: 3615 Weight: 1.00 // 1 50 ENSP00000333779/1-448 MDPKYFILIL FCGHLNNTFF SKTETITTEK QSQPTLFTSS MSQVLANSQN ENSBTAP00000012309/1-456 MDLKYFILIL FCGHLNDTFF SETEATTTER QPQSTLFRPS MPYISANSQG ENSTTRP00000014589/1-451 MDPKYFTIIL FCGHLNDTCF SETEAATTEK QPQSPIFRTS RSYVSANSQS bmy_15639T0/1-451 MDPKYFTIIL FCGHLNDTFF SETEATTTEK QPQSTLLRSS RPYVSANSQS BACU013922/1-451 MDPKYFTIIL FCGHLNDIFF SETEATTTEK QPQSTLLRSS RPYVSANSQS 51 100 ENSP00000333779/1-448 TTGNPLGQPT QFSDTFSGQS ISPAKVTAGQ PTPAVYTSSE KPEAHTSAGQ ENSBTAP00000012309/1-456 TTENPSSQPT QFNNLSSGQP ITTAKIAAGQ PTPLAYASSG KPAAHTSPGQ ENSTTRP00000014589/1-451 TTENPLGQPT QFNNLSSGQP ITTAEVAAGQ PTPDVNVSSG KPAAHTSAGQ bmy_15639T0/1-451 TTENSSGQPT QFNNLSSGQP ITTAEVAAGQ PTPAVYVSSG KPAAHTSAGQ BACU013922/1-451 TIENPSGQPT QFNNLSSGQP ITTAEVAAGQ PTPAVYVSSG KPAAHTSTGQ 101 150 ENSP00000333779/1-448 PLAYN-TKQP TPIANTSSQQ A---VFTSAR QLPSARTSTT QPPKSFVYTF ENSBTAP00000012309/1-456 PLVYNVTRKT IQIANTSSQG TALPVFTSAI QLSPSAYSST RQSPPSVSTP ENSTTRP00000014589/1-451 PLAYNVTRQP IPMANTSSQG TALPVFTSAR QRSTPAHSST RQPPASVCTP bmy_15639T0/1-451 PLAYNVTRKP KPMANTSSQG TALPVFTSAR QRSTSAHSST RQPPPPVYTP BACU013922/1-451 PLAYNVTRKP KPMANTSSQG TALPVFTSAR QRSTSAHSST RQPPPSVYTP 151 200 ENSP00000333779/1-448 TQQSSSVQIP SRKQI--TVH NPSTQPTSTV KNSPRSTPGF ILDTTSNKQT ENSBTAP00000012309/1-456 TQQPSSTHTS SRKSISPTVH NISIQPTPTV KSSPRKTPGF NFEFSRTTNI ENSTTRP00000014589/1-451 TQQPSSIHTS SRKSIPPTAH NLSIQPTPTV RSSPRSTPGF NLETTTRNKS bmy_15639T0/1-451 TQQPSSTHTS SRKSIPPTAH NLSIQPTPTV KSSPRSTPGF NLETTTKNXS BACU013922/1-451 TQQPSSTHTS SRKSIPPTAH NLSIQPTPTV KSSPRSTPGF NLETTTKNKS 201 250 ENSP00000333779/1-448 PQKNNYN-SI AAILIGVLLT SMLVAIIIIV LWKCLRKPVL NDQNWAGRSP ENSBTAP00000012309/1-456 PKEANYAYSI PAILIGAILT TMLVVVLMIV LWQCLRKPVL NDQNWAGRSP ENSTTRP00000014589/1-451 PQKTNSN-ST VAILIGLVLT AMVVAIIMIV LWKCLRKPVL HDQNWAGRSP bmy_15639T0/1-451 PQKTNSN-ST AVXLIGLVLT SMAVAIIMIV LWKCLRKPVL NDQNWAGRSP BACU013922/1-451 PQKTNSN-SI AVILIGLVLT SMVVAIIMIV LWKCLRKPVL NDQNWAGRSP 251 300 ENSP00000333779/1-448 FADGETPDIC MDNIRENEIS TKRTSIISLT PWKPSKSTLL ADDLEIKLFE ENSBTAP00000012309/1-456 FADGETPDIC LDNIRENEAF PKRSSIISLM VWKPSKSALL ADDLEIKLFE ENSTTRP00000014589/1-451 FADGETPDVY LDNIRENEVF PKRTSIVSLR AWKPSKSTLL ADDLEIKLFE bmy_15639T0/1-451 FADGETPDVC LDNIRENEVF PKRTSIVSLT AWKPSKSTLL ADDLEIKLFE BACU013922/1-451 FADGETPDVS LDNIRENEVF PKRTSIVSLT AWKPSKSTLL ADDLEIKLFE 301 350 ENSP00000333779/1-448 SSENIEDSNN PKTEKIKDQV NGTSEDSADG STVGTAVSSS DDADLPPPP- ENSBTAP00000012309/1-456 SKENTEDSNN PKTERIKDQA NGTSEDSGDG STIGTAVSSS DDTDLPPPPA ENSTTRP00000014589/1-451 SNENIEDSNT PKTEKIKDQA NGTSEDSADG STIGTAVSSS DDADPPPPPP bmy_15639T0/1-451 SNENIEDSNT PKTEKIKDQA NGTSEDSADG STIGTAVSSS DDVDPPPPPP BACU013922/1-451 SNENIEDSNT PKTEKIKDQA NGTSEDSADG STIGTAVSSS DDVDPPLPPP 351 400 ENSP00000333779/1-448 PLLDLEGQES NQSDKPTMTI VSPLPNDSTS LPPSLDCLNQ DCGDHKSEII ENSBTAP00000012309/1-456 SLLDIEGQEG NKSDKPTMIT ESPRPNNSTN LPASLDCLNQ ISEHHNSESK ENSTTRP00000014589/1-451 PPLDLEGQAS NQSDRPTVTT VSPLPNDSTN LPPPLDCPNH VCEDHDSEFK bmy_15639T0/1-451 PLLDLEGQES NQSDRPTVTT VSPLPNDSTN LPPSLDCLNQ VCEDHDSEFK BACU013922/1-451 PLLDLEGQES NQSDRPTVTT VSPLPNDSTN LPPSLDCLSQ VCEDHDSEFK 401 450 ENSP00000333779/1-448 QSF-PPLDSL NLPLPPVDFM KNQEDSNLEI QCQEFSIPPN SDQDLNESLP ENSBTAP00000012309/1-456 QSFPPPPDSF NLTVPPGDFM KNQEDCNNEI QCQEFPIPPD FDQDLNESLP ENSTTRP00000014589/1-451 QSFPPPPDSV NLTLPPGDFM KNQ-----EI QCQQFPSPPD FDQNLNESLP bmy_15639T0/1-451 QSFPPPPDSL NLTLPLGDFM TNQ-----EI QCQQFPSPPD SDQNLNESLP BACU013922/1-451 QSFPPPPDSL NLTLPLGDFM TNQ-----EI QCQQFPSPPD SDQNLNESLP 451 500 ENSP00000333779/1-448 PPPAELL ENSBTAP00000012309/1-456 PPPAEL- ENSTTRP00000014589/1-451 PPPAELL bmy_15639T0/1-451 PPPAELL BACU013922/1-451 PPPAELL