KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:46:18 2014 Check: 00 .. Name: ENSP00000401018/1-255 Len: 255 Check: 9049 Weight: 1.00 Name: ENSBTAP00000012322/1-216 Len: 255 Check: 4138 Weight: 1.00 Name: ENSTTRP00000008013/1-216 Len: 255 Check: 6219 Weight: 1.00 Name: bmy_17221T0/1-164 Len: 255 Check: 8703 Weight: 1.00 Name: BACU001815/1-216 Len: 255 Check: 6115 Weight: 1.00 // 1 50 ENSP00000401018/1-255 MSEAYFRVES GALGPEENFL SLDDILMSHE KLPVRTETAM PRLGAFFLER ENSBTAP00000012322/1-216 MSEAYFRVES GALGPEENFL SLDDILMSHE KLSVRTEIPM PRLGAFFLDR ENSTTRP00000008013/1-216 MSEAYFRVES GALGPEENFL SLDDILMSHE KLPVRTEILM PRLGTFFLDR bmy_17221T0/1-164 MSEAYFRVES GALGPEENFL SLDDILMSHE KLPVRTEIPM PRLGTFFLDR BACU001815/1-216 MSEAYFRVES GALGPEENFL SLDDILMSHE KLPVRTEIPM PRLGTFFLDR 51 100 ENSP00000401018/1-255 SAGAETDNAV PQGFALLPRL ECSGVIWLTA ALTSQAPEIL PPQPPMWLVL ENSBTAP00000012322/1-216 SGGAETDNAI P--------- ---------- ---------- ---------- ENSTTRP00000008013/1-216 SGGSEADNAI P--------- ---------- ---------- ---------- bmy_17221T0/1-164 SGGAETDNAI P--------- ---------- ---------- ---------- BACU001815/1-216 SGGAETDNAI P--------- ---------- ---------- ---------- 101 150 ENSP00000401018/1-255 QGSKLELPLW LAKGLFDNKR RILSVELPKI YQEGWRTVFS ADPNVVDLHK ENSBTAP00000012322/1-216 EGTKLELPLW LAKGLFDNKR RILSVELPKI YQEGWRTVFS ADANVVDLHK ENSTTRP00000008013/1-216 QGSKLELPLW LAKGLFDNKR RILSVELPKI YQEGWRTVFS ADANVVDLHK bmy_17221T0/1-164 Q--------- ---------R RILSVELPKI YQEGWRTVFS ADANV----- BACU001815/1-216 QGSKLELPLW LAKGLFDNKR RILSVELPKI YQEGWRTVFS ADANVVDLHK 151 200 ENSP00000401018/1-255 MGPHFYGFGS QLLHFDSPEN ADISQSLLQT FIGRFRRIMD SSQNAYNEDT ENSBTAP00000012322/1-216 MGPHFYGFGS QLLHFDSPEN ADISHSLLQT FVGRFRRIMD SSQNAYNEDT ENSTTRP00000008013/1-216 MGPHFYGFGS QLLHFDSPEN TDISQSLLQT FVGRFRRIMD SSQNAYNEDT bmy_17221T0/1-164 ---------- ---------- ---------T FVGRFRRIMD SSQNAYNEDT BACU001815/1-216 MGPHFYGFGS QLLHFDSPEN TDISRSLLQT FVGRFRRIMD SSQNAYNEDT 201 250 ENSP00000401018/1-255 SALVARLDEM ERGLFQTGQK GLNDFQCWEK GQASQITASN LVQNYKKRKF ENSBTAP00000012322/1-216 SALVARLDEM ERGLFQTGQK GLNDFQCWEK GQASQLTASN LVQNYAKRKF ENSTTRP00000008013/1-216 SALVARLDEM ERGLFQTGQK GLNDFQYWEK GQASQITASN LVQNYTKRKF bmy_17221T0/1-164 SALVARLDEM ERGLFQTGQK GLNDFQCWEK GQASQITASN LVQNYTKRKF BACU001815/1-216 SALVARLDEM ERGLFQTGQK GLNDFQCWEK GQASQITASN LVQNYTKRKF 251 300 ENSP00000401018/1-255 TDMED ENSBTAP00000012322/1-216 TDMED ENSTTRP00000008013/1-216 TDMED bmy_17221T0/1-164 TDMED BACU001815/1-216 TDMED