KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:46:51 2014 Check: 00 .. Name: ENSTTRP00000011061/1-584 Len: 592 Check: 9070 Weight: 1.00 Name: bmy_13945T0/1-580 Len: 592 Check: 762 Weight: 1.00 Name: BACU017352/1-580 Len: 592 Check: 6049 Weight: 1.00 Name: ENSP00000343129/1-588 Len: 592 Check: 4028 Weight: 1.00 Name: ENSBTAP00000012396/1-581 Len: 592 Check: 851 Weight: 1.00 // 1 50 ENSTTRP00000011061/1-584 MEATDASRSG GTSPEARGAR SLLGPKGSLE TGAKAEGKEA RITNGHGREV bmy_13945T0/1-580 MEAADASRSD GASLESRGAR SSLSPKGSLE NGAKAEGKEA KITNGHGREA BACU017352/1-580 MEAADVSRSD GASLEARGAR SLLSPKGSLE TGAKAEGKEA KITNGHGREA ENSP00000343129/1-588 MEAADASRSN GSSPEARDAR SPSGPSGSLE NGTKADGKDA KTTNGHGGEA ENSBTAP00000012396/1-581 MEAADASRSS GA-PEVRDVR SSLSLNGSLE NGVKAERKEV KTANGHGGDV 51 100 ENSTTRP00000011061/1-584 AEGKSLGGSL KPGEGKGSLF LGNKGRGAII QYVESVDDKG SNYFSMDSGE bmy_13945T0/1-580 AEGKSLGGSL KPGEGKGSLF LGNERQRPII QFFESVDDKG SNYFSMDSGE BACU017352/1-580 AEGKSLGGSL KPGEGKASLF LGNERRRPII QFVESVDDKG PNYFSMDSGE ENSP00000343129/1-588 AEGKSLGSAL KPGEGRSALF AGNEWRRPII QFVESGDDKN SNYFSMDSME ENSBTAP00000012396/1-581 SDGQGTG-AL KLSK-QSSLF SGSEWRRPII QFVESVDDKG SSYFSMDSGE 101 150 ENSTTRP00000011061/1-584 GKMSPYARLQ LGATKKPPVT FAEKGELRRP IFSEPRKPTV AVMEPGDLQR bmy_13945T0/1-580 GKRFPYARLQ LGATKKPPVI FAEKGEPHRS IFSEPHKPTV FVPEPGDLQQ BACU017352/1-580 GKRLPYARLQ LGATKKPPVT FAEKGEPRKP IFSEPRKPT- ---EPGDLQR ENSP00000343129/1-588 GKRSPYAGLQ LGAAKKPPVT FAEKGELRKS IFSESRKPTV SIMEPGETRR ENSBTAP00000012396/1-581 GRRSPYAGLQ LGAAKKPPVT FAEKGEPRRS IFSEPRKPSV SIVEPGDIRR 151 200 ENSTTRP00000011061/1-584 NISPRAASST LLHSKLGSEE VLCDSCIGNK QKAVKSCLVC QASFCELHLK bmy_13945T0/1-580 NSSPRAASSN LLRSKSGSEE VLCDSCIGNK QKAVKSCLVC QASFCELHLK BACU017352/1-580 NSSPRATSSN LPCSKSGSEE VLCDSCIGNK QKALKSCLVC QTSFCELHLK ENSP00000343129/1-588 NSYPRADTGL FSRSKSGSEE VLCDSCIGNK QKAVKSCLVC QASFCELHLK ENSBTAP00000012396/1-581 NSYPRGDSST LLRSKSGSEE VLCDSCIGNK QKAVKSCLVC QASFCELHLK 201 250 ENSTTRP00000011061/1-584 PHLEGAAFRD HQLLEPIRDF EARKCPLHGK TMELFCQTDQ TCICYLCMFQ bmy_13945T0/1-580 PHLEGAAFRD HQLLDPIGDF EARKCPLHGK TMELFCQTDQ TCICYLCMFH BACU017352/1-580 PHLEGAAFRD HQLLKPIRDF EARKCPLHGK TMELFCQMDQ TCICYLCMFQ ENSP00000343129/1-588 PHLEGAAFRD HQLLEPIRDF EARKCPVHGK TMELFCQTDQ TCICYLCMFQ ENSBTAP00000012396/1-581 PHLEGAAFRD HQLLEPIRDF EARKCPLHGK TMELFCQTDQ TCICYLCMFQ 251 300 ENSTTRP00000011061/1-584 EHKNHSTVTV EEAKAEKETE LSLQKEQLQL KIIEIEDEAE KWQKEKDRIK bmy_13945T0/1-580 EHKSHSTVTV EEAKAEKETE LSLQKEQLQL KIIEIEDEAE KWQKEKDRIK BACU017352/1-580 EHKNHSTVTV EESKAEKETE LSLQKEQLQL KIIEIEDEAE KWQKEKDRIK ENSP00000343129/1-588 EHKNHSTVTV EEAKAEKETE LSLQKEQLQL KIIEIEDEAE KWQKEKDRIK ENSBTAP00000012396/1-581 EHKNHSTVTV EEAKAEKETE LSLQKEQLQL KIIEIEDEAE KWQKEKDRIK 301 350 ENSTTRP00000011061/1-584 SFTTNEKAAL EQNFRDLMQD LEKQKEEVKA ALEQREQDAA DQVEVIVDAL bmy_13945T0/1-580 SFTTNEKATL EQNFRDLMRD LEKQKEEVKA ALEQREQDAS KQVEVIVDAL BACU017352/1-580 SFTTNEKATL EQNFRDLMQD LEKQKEEVKA ALEQRERDAS EQVEVIVDAL ENSP00000343129/1-588 SFTTNEKAIL EQNFRDLVRD LEKQKEEVRA ALEQREQDAV DQVKVIMDAL ENSBTAP00000012396/1-581 SFTTNEKAIL EQSFRDLVRD LEKQKEEVRA ALEQREQDAV DQVKVIVDAL 351 400 ENSTTRP00000011061/1-584 DERAKVLQDD KQTREQLHNI SDSVLFLQEF GALMSSYSLP PPLPTYHVLL bmy_13945T0/1-580 DERAKVLQDD KQTREQLHSI SDSVLFLQEF GALMSSYCLP PPLPTYHVLL BACU017352/1-580 HERAKVLQDD KQTREQLHSI SDSVLFLQEF GALMSSYSFP PPLPTYHVLL ENSP00000343129/1-588 DERAKVLHED KQTREQLHSI SDSVLFLQEF GALMSNYSLP PPLPTYHVLL ENSBTAP00000012396/1-581 EERAKVLQDD KQIREQLHSI SDSVLFLQEF GALMSSYSLP PPLPTYHVLL 401 450 ENSTTRP00000011061/1-584 EGEGLGQSLN NFKDDLLNVC MRHVEKMCKG DLSHSFIERN HMENGGDQRY bmy_13945T0/1-580 EREGLGQSLG NLKDDLLNVC MRHIEKMCKA DLSRNFIERN HMEDGGDHRY BACU017352/1-580 EGEGLGQSLG NFKDDLLNVC MRHIEKMCKA DLSRNFIERN HMEDGGDHRY ENSP00000343129/1-588 EGEGLGQSLG NFKDDLLNVC MRHVEKMCKA DLSRNFIERN HMENGGDHRY ENSBTAP00000012396/1-581 EGEGLGQALG NCKDDLLNVC MRHVEKMCKA DLSRNFIERN HMENGGDHRY 451 500 ENSTTRP00000011061/1-584 VNSYNNSYTS DWGAPDTVKK YSMYLASKGG SRTSYQPVSP SRLSKD---K bmy_13945T0/1-580 MNSYSNSYSN EWSAPDTVKK YSMYLTPKGG AKTSYQPVSP SRLSKE---K BACU017352/1-580 MNSYNNSYSS EWSAPDTVKK YSMYLTPKGG AKTSYQPVSP SRLSKE---K ENSP00000343129/1-588 VNNYTNSFGG EWSAPDTMKR YSMYLTPKGG VRTSYQPSSP GRFTKETTQK ENSBTAP00000012396/1-581 MNNYSNSYTS EWSAPDAMKR YSMYLTPKGG ARTSYQPASP SRLSKE---K 501 550 ENSTTRP00000011061/1-584 TFNNLYGTKG NYTSRAWEYS SPVQSSN-DL PAVQGSSSFS LKGYPSLLRS bmy_13945T0/1-580 TFNNLYGTKG NYASRAWDYS STIQSSD-DL PAGQGNSSFS LKGYPSLLRS BACU017352/1-580 TFNNLCGTKG NYTSRVWDYS STIQSSD-DL PAVQGSSSFS LKGYPSLLRN ENSP00000343129/1-588 NFNNLYGTKG NYTSRVWEYS SSIQNSDNDL PVVQGSSSFS LKGYPSLMRS ENSBTAP00000012396/1-581 NFNNLYGTKG NYTSRVWEYS STIQSSD-DV PAVQGSSSFS LKGYPSLIRS 551 600 ENSTTRP00000011061/1-584 QSPKAQPQTW KSSKQNYLSQ YRPF----CV NKGNEIRPSE AP bmy_13945T0/1-580 QSPKAQPQTW KSSKQNYLVS EESLPGHEHV QNGH------ -- BACU017352/1-580 QSPKAQPQTW KSSKQNYLSN YQPF----YV NKGNGIRSNE AP ENSP00000343129/1-588 QSPKAQPQTW KSGKQTMLSH YRPF----YV NKGNGIGSNE AP ENSBTAP00000012396/1-581 QSPKAQPQTW KSGKQTLLSH YRPF----YV NKGNGIGSNE AP