KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:46:52 2014 Check: 00 .. Name: ENSBTAP00000012400/1-412 Len: 413 Check: 5574 Weight: 1.00 Name: ENSP00000295461/1-410 Len: 413 Check: 2915 Weight: 1.00 Name: ENSTTRP00000003074/1-411 Len: 413 Check: 2068 Weight: 1.00 Name: bmy_10816T0/1-413 Len: 413 Check: 4335 Weight: 1.00 Name: BACU008747/1-381 Len: 413 Check: 3713 Weight: 1.00 // 1 50 ENSBTAP00000012400/1-412 MGGQVRLPPG EPCREGYVLS LSCPNTSQAW CEITRVSQLL ASPVLYRDLN ENSP00000295461/1-410 MGAQVRLPPG EPCREGYVLS LVCPNSSQAW CEITNVSQLL ASPVLYTDLN ENSTTRP00000003074/1-411 MGGQVRLPPG EPCREGYVLS LICPNASQAW CEITRVSQLL ASPVLYRDLN bmy_10816T0/1-413 MGGQVRLPPG EPCREGYVLS LICPNASQAW CEIIRVSQLL ASPVLYRDLN BACU008747/1-381 ------FP-- -----GYVLS LICPNASQAW CEIIRVSQLL ASPVLYRDLN 51 100 ENSBTAP00000012400/1-412 SSITNLSVST NTENKYNLYI GLVLAISSSI FIGSSFILKK KGLLQLAKKG ENSP00000295461/1-410 YSINNLSISA NVENKYSLYV GLVLAVSSSI FIGSSFILKK KGLLQLASKG ENSTTRP00000003074/1-411 SSITNCSISA NAENKYSLYV GLVLAISSSI FIGSSFILKK KGLLQLANRG bmy_10816T0/1-413 SSITNWSISA NAENKYSLYV GLVLAISSSI FIGSSFILKK KGLLQLANKG BACU008747/1-381 SSITNWSISA NAENKYSLYV GLVLAISSSI FIGSSFILKK KGLLQLANKG 101 150 ENSBTAP00000012400/1-412 VTRAGQGGHS YLKEWLWWAG LLSMGAGEAV NFAAYAFAPA TLVTSLGALS ENSP00000295461/1-410 FTRAGQGGHS YLKEWLWWVG LLSMGAGEAA NFAAYAFAPA TLVTPLGALS ENSTTRP00000003074/1-411 VTRAGQGGYS YLKEWLWWAG LLSMGAGEAA NFAAYAFAPA TLVTPLGALS bmy_10816T0/1-413 VTRAGQGGYS YLKEWLWWAG LLSMGAGEAA NFAAYAFAPA TLVTPLGALS BACU008747/1-381 VTRA------ ---------- ---VGAGEAA NFAAYAFAPA TLVTPLGALS 151 200 ENSBTAP00000012400/1-412 VLVSAILSSY FLNERLNIHG KIGCILSILG STVMVIHAPQ EEKVATLHEM ENSP00000295461/1-410 VLISAILSSY FLNEHLNIHG KIGCILSILG STVMVIHAPQ EEEVTSLHEM ENSTTRP00000003074/1-411 VLISALLSSY FLNEHLNIHG KIGCTLSILG STVMVIHAPQ EEEVASLHEM bmy_10816T0/1-413 VLISALLSSY FLNEHLNIHG KIGCILSILG STVMVIHAPQ EEEVASLHEM BACU008747/1-381 VLISALLSSY FLNEHLNIHG KIGCILSILG STVMVIHAPQ EEEVASLHEM 201 250 ENSBTAP00000012400/1-412 EMKLRDPGFI CFAVIITVIS LVLILIVAPK KGQTNILVYI SICSLIGAFS ENSP00000295461/1-410 EMKLRDPGFI SFAVIITVIS LVLILIVAPK KGQTNILVYI SICSLIGAFS ENSTTRP00000003074/1-411 EMKLRHPGFI SFAVIITVIS LVMILIVAPK KGQTNILVYI SICSLIGAFS bmy_10816T0/1-413 EMKLRDPGFI SFAVIITVIS LVLILIVAPK KGQTNILVYI SICSLIGAFS BACU008747/1-381 EMKLRDPGFI SFAVIITVIS LVLILIVAPK KGQTNILVYI SICSLIGAFS 251 300 ENSBTAP00000012400/1-412 VSSVKGLGIA IKELLEWKPV YKHPLVFVLL AVLVLSVATQ INYLNKALDT ENSP00000295461/1-410 VSSVKGLGIA IKELIEWKPV YKHPLVFVLL AVLVLSVTTQ INYLNKALDT ENSTTRP00000003074/1-411 VSSVKGLGIA IKELLEWKPI YKHPLVFVLL AVLVLSVTTQ INYLNKALDT bmy_10816T0/1-413 VSSVKGLGIA IKELLEWKPI YKHPLVFVLL AVLVLSVTTQ INYLNKALDT BACU008747/1-381 VSSVKGLGIA IKELLEWKPI YKHPLVFVLL AVLVLSVTTQ INYLNKALDT 301 350 ENSBTAP00000012400/1-412 FNTSLVTPIY YVLFTSMVVT CSAILFQEWY GMNAGDVIGT LSGFFTIING ENSP00000295461/1-410 FNTSLVTPIY YVFFTSMVVT CSAILFQEWY GMTAGDIIGT LSGFFTIIIG ENSTTRP00000003074/1-411 FNTSLVTPIY YVFFTSMVVT CSAILFQEWY GMNAGDIIGT LSGFFTIING bmy_10816T0/1-413 FNTSLVTPIY YVFFTSMVVT CSAILFQEWY GMNAGDIIGT LSGFFTIING BACU008747/1-381 FNTSLVTPIY YVFFTSMVVT CSAILFQEWY GMNAGDVIGT LSGFFTIING 351 400 ENSBTAP00000012400/1-412 IFLLHAFKNI DITWSDLTST TQKEVLSANG SEDKYVLLEN TDCSVPGFDD ENSP00000295461/1-410 IFLLHAFKNT DITWSELTST AKKEAVSLNV NENNYVLLEN LECSAPGYND ENSTTRP00000003074/1-411 IFLLHAFKNT DITWSDLTST TQKEVLSLNG NEHKYVLLEN VECSAPGFDD bmy_10816T0/1-413 IFLLHAFKNT DITWSDLTST TQKEVLSLNG NEDKYVLLEN VECSAPGFDD BACU008747/1-381 IFLLHAFKNT DITWSDLTST TQKEVLSLNG NEDKYVLLEN VECSTPGFDD 401 450 ENSBTAP00000012400/1-412 DITLYSRTGQ NP- ENSP00000295461/1-410 DVTLFSRTDD --- ENSTTRP00000003074/1-411 DIPLFSRTDD Q-- bmy_10816T0/1-413 DITLFSRTDD QSP BACU008747/1-381 DITLFSRTDD QSP