KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:46:52 2014 Check: 00 .. Name: ENSTTRP00000004251/1-566 Len: 605 Check: 5044 Weight: 1.00 Name: ENSP00000306682/1-605 Len: 605 Check: 1707 Weight: 1.00 Name: ENSBTAP00000012404/1-605 Len: 605 Check: 3409 Weight: 1.00 Name: bmy_10825T0/1-351 Len: 605 Check: 8864 Weight: 1.00 Name: BACU013991/1-596 Len: 605 Check: 883 Weight: 1.00 // 1 50 ENSTTRP00000004251/1-566 ---------- ---------- ---------- ---------S PRRSLSQPLP ENSP00000306682/1-605 MAGLYSLGVS VFSDQGGRKY MEDVTQIVVE PEPTAEEKPS PRRSLSQPLP ENSBTAP00000012404/1-605 MAGLYSLGVS VFSDQGGRKY MEDVTQIVVE PEPAAEEELS SRRSPSRPPP bmy_10825T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU013991/1-596 MAGLYSLGVS VFSDQGGRKY MEDVTQIVVE PEPTAEEE-- -------PSP 51 100 ENSTTRP00000004251/1-566 PQRSPLALPG GEISGKGPAV AAREARDAPP NAGASPAPGC CCRRRSSVAF ENSP00000306682/1-605 PRPSPAALPG GEVSGKGPAV AAREARDPLP DAGASPAPSR CCRRRSSVAF ENSBTAP00000012404/1-605 PPRSPPPPAG GEVAGRGAAG AAREARAAPP DAGASPAPGR CCRRRSSVAF bmy_10825T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU013991/1-596 RSGHRWLFLA AKSRGKARRW QPERLATRRR TPGPRRLPAA AAAARSSVAF 101 150 ENSTTRP00000004251/1-566 FAVCDGHGGR EAAQFAREHL WGFIKKQKGF TSSEPAKVCA AIRKGFLACH ENSP00000306682/1-605 FAVCDGHGGR EAAQFAREHL WGFIKKQKGF TSSEPAKVCA AIRKGFLACH ENSBTAP00000012404/1-605 FAVCDGHGGR EAAQFAREHL WGFIKKQRGF TSSEPAKVCA AIRKGFLACH bmy_10825T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU013991/1-596 FAVCDGHGGR EAAQFAREHL WGFIKKQKGF TSSEPAKVCA AIRKGFLACH 151 200 ENSTTRP00000004251/1-566 LAMWKKLAEW PKTMTGLPST SGTTASVVII RGLKMYVAHV GDSGVVLGIQ ENSP00000306682/1-605 LAMWKKLAEW PKTMTGLPST SGTTASVVII RGMKMYVAHV GDSGVVLGIQ ENSBTAP00000012404/1-605 LAMWKKLAEW PKTMTGLPST SGTTASVVII RGLKMYVAHV GDSGVVLGIQ bmy_10825T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU013991/1-596 LAMWKKLAEW PKTMTGLPST SGTTASVVII RGLKMYVAHV GDSGVVLGIQ 201 250 ENSTTRP00000004251/1-566 DDPKDDFIRA VEVTQDHKPE LPKERERIEG LGGSVMNKSG VNRVVWKRPR ENSP00000306682/1-605 DDPKDDFVRA VEVTQDHKPE LPKERERIEG LGGSVMNKSG VNRVVWKRPR ENSBTAP00000012404/1-605 DDPKDDFIRA VEVTQDHKPE LPKERERIEG LGGSVMNKSG VNRVVWKRPR bmy_10825T0/1-351 ---------- ---------- ---------- -----MNKSG VNRVVWKRPR BACU013991/1-596 DDPKDDFIRA VEVTQDHKPE LPKERERIEG LGGSVMNKSG VNRVVWKRPR 251 300 ENSTTRP00000004251/1-566 LTHSGPVRRS TVIDQIPFLA VARALGDLWS YDFFSGEFVV SPEPDTSVHT ENSP00000306682/1-605 LTHNGPVRRS TVIDQIPFLA VARALGDLWS YDFFSGEFVV SPEPDTSVHT ENSBTAP00000012404/1-605 LTHNGPVRRS TVIDQIPFLA VARALGDLWS YDFFSGEFVV SPEPDTSVHT bmy_10825T0/1-351 LTHNGPVRRS TVIDQIPFLA VARAL----- ---------- ----DTSVHT BACU013991/1-596 LTHNGPVRRS TVIDQIPFLA VARALGDLWS YDFFSGEFVV SPEPDTSVHT 301 350 ENSTTRP00000004251/1-566 LDPQKHKYII LGSDGXXXXX XXXXXXXXXX XXXXXXXXXG EHGQSCAKML ENSP00000306682/1-605 LDPQKHKYII LGSDGLWNMI PPQDAISMCQ DQEEKKYLMG EHGQSCAKML ENSBTAP00000012404/1-605 LDPQKHKYII LGSDGLWNMI PPQDAISMCQ DQEEKKYLMG EHGQSCAKML bmy_10825T0/1-351 LDPQKHKYII LGSDGLWNMI PPQDAISMCQ DQEEKKYLTG EHGQSCAKML BACU013991/1-596 LDPQKHKYII LGSDGLWNMI PPQDAISMCQ DQEEKKYLTG EHGQSCAKML 351 400 ENSTTRP00000004251/1-566 VNRALGRWRQ RMLRADNTSA IVICISPGAG TQGDFTNEDE LYLNLTDSPS ENSP00000306682/1-605 VNRALGRWRQ RMLRADNTSA IVICISPEVD NQGNFTNEDE LYLNLTDSPS ENSBTAP00000012404/1-605 VNRALGRWRQ RMLRADNTSA IVICISPGVD SQGHFTSEDE LYLNLTDSPS bmy_10825T0/1-351 VNRALGRWRQ RMLRADNTSA IVICISPGVG TQGDFTNEDE LYLNLTDSPS BACU013991/1-596 VNRALGRWRQ RMLRADNTSA IVICISPGVG TQGDFTNEDE LYLNLTDSPS 401 450 ENSTTRP00000004251/1-566 YNSQETCVMT SSPCSTPPVK SLEEDPWPRL NSKDHIPALM RSNAFSENYL ENSP00000306682/1-605 YNSQETCVMT PSPCSTPPVK SLEEDPWPRV NSKDHIPALV RSNAFSENFL ENSBTAP00000012404/1-605 YNSQETCVMT PSPCSTPPVK PLEEDPWPRL NSKDHIPALI RSNAFSENYL bmy_10825T0/1-351 YNSQETCVMT PSPCSTPPVK SLEEDPWPRL NSKDHIPALV RSNAFSENYL BACU013991/1-596 YNSQETCVMT PSPCSTPPVK SLEEDPWPRL NSKDHIPALV RSNAFSENYL 451 500 ENSTTRP00000004251/1-566 EVPAEIARGN VQAAVISSKD PEPLEENCTK ALTLRIHDSL NNSLSVGLVP ENSP00000306682/1-605 EVSAEIAREN VQGVVIPSKD PEPLEENCAK ALTLRIHDSL NNSLPIGLVP ENSBTAP00000012404/1-605 EVPPEIARGN VQAAVISSKD PEPLEENCTK ALTLRIHDSL NNSLSVGLVP bmy_10825T0/1-351 EVPAEIARGN VQAAVISSKD PEPLEENCTK ALTLRIHDSL NNSLSVGLVP BACU013991/1-596 EVPAEIARGN VQAAVISSKD PEPLEENCTK ALTLRIHDSL NNSLSVGLVP 501 550 ENSTTRP00000004251/1-566 TNSTNTIMDQ KNLKMSIPGQ MKAQEVERTP PTNFKRTLEE SNSGPLVKKH ENSP00000306682/1-605 TNSTNTVMDQ KNLKMSTPGQ MKAQEIERTP PTNFKRTLEE SNSGPLMKKH ENSBTAP00000012404/1-605 TNSTNTITDQ KNVKISSPGQ MKAQEVERTP PANFKRTLEE SNSGPLMKKH bmy_10825T0/1-351 TNSTNTIVDQ KNLKMSIPGQ MKAQEVERTP PTNFKRTLEE SNSGPLVKKH BACU013991/1-596 TNSTNTIVDQ KNLKMSIPGQ MKAQEVERTP PTNFKRTLEE SNSGPLVKKH 551 600 ENSTTRP00000004251/1-566 RRNGLSRSSG AQPASLPTNS QRKNSVKLTM RRRLRGQKKI GNPLLHQHRK ENSP00000306682/1-605 RRNGLSRSSG AQPASLPTTS QRKNSVKLTM RRRLRGQKKI GNPLLHQHRK ENSBTAP00000012404/1-605 RRNGLSRSSG AQPASLPTTS QRKNSVKLTV RRRLRGQKKI GNPLLHQHRK bmy_10825T0/1-351 RRNGLSRSSG AQPASLPTNS QRKNSVKLTM RRRLRGQKKI GNPLLHQHRK BACU013991/1-596 RRNGLSRSSG AQPASLPTNS QRKNSVKLTM RRRLRGQKKI GNPLLHQHRK 601 650 ENSTTRP00000004251/1-566 TVCVC ENSP00000306682/1-605 TVCVC ENSBTAP00000012404/1-605 TVCVC bmy_10825T0/1-351 TVCVC BACU013991/1-596 TVCVC