KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:46:53 2014 Check: 00 .. Name: BACU009722/1-543 Len: 644 Check: 1099 Weight: 1.00 Name: ENSTTRP00000006422/1-556 Len: 644 Check: 5098 Weight: 1.00 Name: bmy_11101T0/1-544 Len: 644 Check: 5977 Weight: 1.00 Name: ENSBTAP00000012406/1-597 Len: 644 Check: 7407 Weight: 1.00 // 1 50 BACU009722/1-543 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006422/1-556 ---------- ---------- ---------- ---------- -PVQKNILAA bmy_11101T0/1-544 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012406/1-597 MAEGSAVSDP QHATRLLRAL SSFREESRFC DAHLVLDGEE IPVQKNILAA 51 100 BACU009722/1-543 ---------- ---------- --MALSGLVV LLLAVLYDGI KVGKARLLHQ ENSTTRP00000006422/1-556 ASPYIRTKLN YNPPKDDGST YKIELEGISV MVMREILDYI FSGQIRLSEE bmy_11101T0/1-544 ---MDTTKLN YNPPKDDGST YKIVLEGISV MVMREILDYI FSGQIRLNED ENSBTAP00000012406/1-597 ASPYIRTKLN YNPPKDDGST YKIELEGISV MVMREILDYI FSGQIRLNED 101 150 BACU009722/1-543 ALTRLSISTS QQLIGETGRN SSSSESPAVS RTHLRWFLCP FGQSLLPVAR ENSTTRP00000006422/1-556 TIQDVVQAAD LLLL------ ---------- -TDLKTLCCE FLEGCIAAEN bmy_11101T0/1-544 TIQDVVQAAD LLLL------ ---------- -TDLKTLCCE FLEGCIAAEN ENSBTAP00000012406/1-597 TIQDVVQAAD LLLL------ ---------- -TDLKALCCE FLEGCIAAEN 151 200 BACU009722/1-543 VV-IGYFMML AVMSYIFFGV V--LGSVFQE WENVYSKCTT YSPFFLPVLA ENSTTRP00000006422/1-556 CIGIRDFALH YCLHHVHYLA TEYLETHFRD VSST-EEFLE LSPQKLKEVI bmy_11101T0/1-544 CIGIRDFALH YCLHHVHYLS TEYLETHFRD VSST-EEFLE LSPQKLKEVI ENSBTAP00000012406/1-597 CIGIRDFALH YCLHHVHYLA TEYLETHFRD VSST-EEFLE LSPQKLKEVI 201 250 BACU009722/1-543 ALQ------- ---------- ---------V HMKDVMSALW VSGLDSSYLR ENSTTRP00000006422/1-556 SLEKLNVGNE RYVFEAVIRW IAHDTEIRKV HMKDVMSALW VSGLDSSYLR bmy_11101T0/1-544 SLEKLNVGNE RYVFEAVIRW IAHDTEIRKV HMKDVMSALW VSGLDSSYLR ENSBTAP00000012406/1-597 SLEKLNVGNE KYVFEAVIRW IAHDTEIRKV HMKDVMSALW VSGLDSSYLR 251 300 BACU009722/1-543 EQMLNEPLVR EIVKECSNIP LSQPQQGEAM LASFKPRGYS ECIVTVGGEE ENSTTRP00000006422/1-556 EQMLNEPLVR EIVKECSNIP LSQPQQGEAM LASFKPRGYS ECIVTVGGEE bmy_11101T0/1-544 EQMLNEPLVR EIVKECSNIP LSQPQQGEAM LASFKPRGYS ECIVTVGGEE ENSBTAP00000012406/1-597 EQMLNEPLVR EIVKECSNIP LSQPQQGEAM LASFKPRGYS ECIVTVGGEE 301 350 BACU009722/1-543 RVSRKPTAAM RCMCPLYDPN RQLWIELAPL SMPRINHGIL SAEGFLFVYG ENSTTRP00000006422/1-556 RVSRKPTAAM RCMCPLYDPN RQLWIELAPL SMPRINHGVL SAEGFLFVFG bmy_11101T0/1-544 RVSRKPTAAM RCMCPLYDPN RQLWIELAPL SMPRINHGIL SAEGFLFVYG ENSBTAP00000012406/1-597 RVSRKPTAAM RCMCPLYDPN RQLWIELAPL SMPRINHGVL SAEGFLFVFG 351 400 BACU009722/1-543 GQDENKQTLS SGEKYDPDAN TWTTLPPMNE ARHNFGIVEI DGMLYVLGGE ENSTTRP00000006422/1-556 GQDENKQTLS SGEKYDPDAN TWTALPPMNE ARHNFGIVEI DGMLYVLGGE bmy_11101T0/1-544 GQDENKQTLS SGEKYDPDAN TWTTLPPMNE ARHNFGIVEI DGMLYVLGGE ENSBTAP00000012406/1-597 GQDENKQTLS SGEKYDPDAN MWTALPPMNE ARHNFGIVEI DGMLYVLGGE 401 450 BACU009722/1-543 DGEKELISME CYDIYSKTWT KQPDLTMVRK IGCYAAMKKK IYAMGGGSYG ENSTTRP00000006422/1-556 DGEKELISME CYDIYSKTWT KQPALTMVRK IGCYAAMKKK IYAMGGGSYG bmy_11101T0/1-544 DGEKELISME CYDIYSKTWT KQPDLTMVRK IGCYAAMKKK IYAMGGGSYG ENSBTAP00000012406/1-597 DGEKELISME CYDIYSKTWT KQPDLTMVRK IGCYAAMKKK IYAMGGGSYG 451 500 BACU009722/1-543 KLFESVECYD PRTQQWTAIC PLKERRFGAV ACGVAMELYV FGGVRSREDI ENSTTRP00000006422/1-556 KLFESVECYD TRTQQWTAIC PLKERRFGAV ACGVAMELYV FGGVRSREDI bmy_11101T0/1-544 KLFESVECYD PRTQQWTAIC PLKERRFGAV ACGVAMELYV FGGVRSREDI ENSBTAP00000012406/1-597 KLFESVECYD PRTQQWTAIC PLKERRFGAV ACGVAMELYV FGGVRSREDI 501 550 BACU009722/1-543 QGGEMVTCKS EFYHDEFKRW IYLNDQNLCI PASSSFVYGA VPIGASIYVI ENSTTRP00000006422/1-556 QGGEMVTCKS EFYHDEFKXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11101T0/1-544 QGGEMVTCKS EFYHDEFKRW IYLNDQNLCI PASSSFVYGA VPIGASIYVI ENSBTAP00000012406/1-597 QGGEMVTCKS EFYHDEFKRW IYLNDQNLCI PASSSFVYGA VPIGASIYVI 551 600 BACU009722/1-543 GDLDTGQNVT VILSEPFPGD SEARCVTSAY SHGAGTNYDY VREFKRSTGT ENSTTRP00000006422/1-556 XXXXX----- ---------- ---------- ----XXXXXX XXXXXXXXXX bmy_11101T0/1-544 GDLDT----- ---------- ---------- ----GTNYDY VREFKRSTGT ENSBTAP00000012406/1-597 GDLDT----- ---------- ---------- ----GTNYDY VREFKRSTGT 601 650 BACU009722/1-543 WHHTKPLLPS DLRRTGCAAL RIANCKLFRL QLQQGLFRIR VHSP ENSTTRP00000006422/1-556 XXXXXXXXXX XXRRTGCAAL RIANCKLFRL QLQQGLFRIR VHSP bmy_11101T0/1-544 WHHTKPLLPS DLRRTGCAAL RIANCKLFRL QLQQGLFRIR VHSP ENSBTAP00000012406/1-597 WQHTKPLLPS DLRRTGCAAL RIANCKLFRL QLQQGLFRIR VHSP