KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:46:54 2014 Check: 00 .. Name: ENSTTRP00000000153/1-851 Len: 944 Check: 5079 Weight: 1.00 Name: ENSP00000301972/1-859 Len: 944 Check: 8039 Weight: 1.00 Name: ENSBTAP00000012409/1-818 Len: 944 Check: 245 Weight: 1.00 Name: bmy_15093T0/1-455 Len: 944 Check: 8574 Weight: 1.00 Name: BACU015648/1-868 Len: 944 Check: 7706 Weight: 1.00 // 1 50 ENSTTRP00000000153/1-851 MGRKLDLSGL TDDETEHVLQ VVQRDFNLRK KEEERLXXXX XXXXXXXXXX ENSP00000301972/1-859 MGRKLDLSGL TDDETEHVLQ VVQRDFNLRK KEEERLSELK QKLDEEGSKC ENSBTAP00000012409/1-818 ---------- ---------- ---------- ------SEMK QRLDAEGSKC bmy_15093T0/1-455 ---------- ---------- ---------- ---------- ---------- BACU015648/1-868 ---------- ---------- ---------- --------MK QKLDEEGSKC 51 100 ENSTTRP00000000153/1-851 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301972/1-859 SILSKHQQFV EHCCMRCCSP FTFLVNTKRQ CGDCKFNVCK SCCSYQKHEK ENSBTAP00000012409/1-818 SILSKHQKFV EHCCMRCCAP FTFLISTKRR CGDCKFNVCK GCCSYQKREK bmy_15093T0/1-455 ---------- ---------- ---------- ---------- ---------- BACU015648/1-868 SILSKHQKFV EHCCMRCCSP FTFLVNTKRR CGDCKFNVCK SCCSYQKHEK 101 150 ENSTTRP00000000153/1-851 XXXXXXXXXX ---------- ---------- ---------- ---------- ENSP00000301972/1-859 AWVCCVCQQA R--------- ---------- ---------- ---------- ENSBTAP00000012409/1-818 VWVCCVCQQA R--------- ---------- ---------- ---------- bmy_15093T0/1-455 ---------- ---------- ---------- ---------- ---------- BACU015648/1-868 VWICCVCQQA RLDNCLLEYQ SDSLNRTERN ESSVVCGAEG HGDSLRDGRV 151 200 ENSTTRP00000000153/1-851 ---------- ---------X LRTQSLEWFY NNVKSFFKRF GSAKVLKNLY ENSP00000301972/1-859 ---------- ---------L LRAQSLEWFY NNVKSRFKRF GSAKVLKNLY ENSBTAP00000012409/1-818 ---------- ---------V LRTQSLEWFY NNVKSRFKRF GSAKVLKNLY bmy_15093T0/1-455 ---------- ---------V LRIQSLEWFY NNVKSRFKRF GSAKVLKNLY BACU015648/1-868 QGQVRTSAIK SREGFLRDRV LRIQSLEWFY NNVKSRFKRF GSAKVLKNLY 201 250 ENSTTRP00000000153/1-851 RKHRLESGGC FDILGGSFFD ANLENEGSIS GSDSTFYRQS EGHSMMDTLA ENSP00000301972/1-859 RKHRLESGAC FDILGGSLFE SNLENEGSIS GSDSTFYRQS EGHSVMDTLA ENSBTAP00000012409/1-818 RKHRLESGVC FDIVGGNFFE ANLENEGSVS GSDSTFYRQS EGHSMMDTLA bmy_15093T0/1-455 RKHRLESGGC FDILESSLCS VS-------- ---------C LGHSMMDTLA BACU015648/1-868 RKHRLESGGC FDILGGSFFE ANLENEGSIS GSDSTFYRQS EGHSMMDTLA 251 300 ENSTTRP00000000153/1-851 VALRVAEEAI EEAISKAEAY GDSLDKQNEA SYLRDHREEL TEELATTILQ ENSP00000301972/1-859 VALRVAEEAI EEAISKAEAY GDSLDKQNEA SYLRDHKEEL TEELATTILQ ENSBTAP00000012409/1-818 VALRVAEEAI EEAISKAEAY GDSLDKQNEA SYLRDHKEEL TEELATTILQ bmy_15093T0/1-455 VALRVAEEAI EEAISKAEAY GDSLDKQNEA SYLRDHREEL TEELATTILQ BACU015648/1-868 VALRVAEEAI EEAISKAEAY GDSLDKQNEA SYLRDHREEL TEELATTILQ 301 350 ENSTTRP00000000153/1-851 KXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXR ENSP00000301972/1-859 KIIRKQKSKS EQQVEEEPGW PHPQSCSTKV ADEGTSASPG GYRAPAALWR ENSBTAP00000012409/1-818 KIIRKQKSKS EQRAEDEPEW PQPQSCGAEA ADAGTTAAPG GPQASTTFWR bmy_15093T0/1-455 KIIRKQKSKS EQHVEEEPEW PQPQSCRAKA ADEGTTASPG GHRASTTSWW BACU015648/1-868 KIIRKQKSKS EQHVEEEPEW PQPQSCRAKA ADKATTASPG GHRASTTSWR 351 400 ENSTTRP00000000153/1-851 SQSAFPLSRE DALRTSSLEA ASRQPRD--Q QLREEEALPS WKSVDRLDET ENSP00000301972/1-859 SQSAFSITGE EALKTPPVEA PSRQPRDQGQ HPRAESALPS WKSVDRLDET ENSBTAP00000012409/1-818 SQSAFSLSRE DALRTPSLEA ASREPRE--Q HPREEEALPS WKSVDRLDQT bmy_15093T0/1-455 SQSVFSLSRE DALRTSSLEV ASRQPRE--- ----EEAWPS WKSVDRLDET BACU015648/1-868 SQSVFSLSRE DALRTSSLEV ASRQPRE--- ----EEAXXX ----DRLDET 401 450 ENSTTRP00000000153/1-851 ---------- ---------- ----NVAPVL QSPDGNWMAL KDGALPPTRL ENSP00000301972/1-859 ---------- ---------- ----NLAPVL QSPDGNWVAL KDGAPPPTRL ENSBTAP00000012409/1-818 ---------- ---------- ----MVAPVL QSPDGNWIAL KDGALPPARL bmy_15093T0/1-455 SNCSKQHVLG GNSPSLISLS LLPADVAPVL QSPDGNWMAL KDGALPPTRL BACU015648/1-868 ---------- ---------- ----NVAPVW HSPDGNWMAL KDGALPPTRL 451 500 ENSTTRP00000000153/1-851 LAKPKSGTFQ ALEAASSVAS AYDEMGSDSE EDFDWKEALS TLCPQPQSLP ENSP00000301972/1-859 LAKPKSGTFQ ALEVASSVAS AYDEMGSDSE EDFDWSEALS KLCPRSRALP ENSBTAP00000012409/1-818 LAKPKSDAFQ ALEAASSVAS AYDELGSDSE EDFDWREALS TLCLQPRALP bmy_15093T0/1-455 LAKPKSGTFQ ALEAASSVAS AYDEMGSDSE EDFDWKKALS TLCPQPQSLP BACU015648/1-868 LAKPKSGTFQ ALEAASSVAS AYDEMGSDSE EDFDWKEALS TLCPQPQSLA 501 550 ENSTTRP00000000153/1-851 RNPQPQPTQA QGSDQGS--- SAYSGLSPNP EAMCSDSETS SAGSSREAGH ENSP00000301972/1-859 RNPQPQPTQA QSSDQGPIAA SPSSALSPNP EAMCSDSETS SAGSSREVGH ENSBTAP00000012409/1-818 GEPQTQPTQA PGSDQGP--- SASSGPSPNP EAMWSDSETS SVGSSREAGH bmy_15093T0/1-455 RNPQPQPMQA QDSDQDP--- SAYSGLSPNP EAMCSDSETS SAGSSREAGR BACU015648/1-868 RNPQPQPMQA QGSDQGP--- SAYSGLSPNP EAMCSDSETS SAGSSREAGR 551 600 ENSTTRP00000000153/1-851 RAGLSWLQRK APRNPSAEKM RLQGELDVNF NPQAASRETS DSSEPEEAPH ENSP00000301972/1-859 QARLSWLQRK APRNPAAEKM RLHGELDVNF NPQLASRETS DSSEPEEAPH ENSBTAP00000012409/1-818 RARLSWLQRK APRNPAAEKM RLQGELDVNF NLQAAGRETS DSSEPEEAPH bmy_15093T0/1-455 RARLSWLQRK APRNPSAEKM RLQGELDVNF NPQAASRETS DSSEPEEAPH BACU015648/1-868 RARLSWLQRK APRNPSAEKM RLQGELDVNF NPQAASRETS DSSEPEEAPH 601 650 ENSTTRP00000000153/1-851 PADRRARRWR RARVGSEEPS KELSFPSGHP PELDTHQVSG DLSKTDTCNE ENSP00000301972/1-859 TTDRRARRWR RARLGSEEPS KEPSSPSAQL RDLDTHQVSD DLSETDISNE ENSBTAP00000012409/1-818 AADRRARRWR RARGCSEELS KELPSPSGHP PELDTHQVPG GLSETDTSSE bmy_15093T0/1-455 PTDRRARRWR RARVGSEEPS KELSSPSGHP LELDTHQV-- ---------- BACU015648/1-868 PADRRARRWR RARVGSEEPS KELSSPSGHP PELDTHQVSG DLSKTDICNE 651 700 ENSTTRP00000000153/1-851 ARHPQAGTDA AEEKRTNRLY ELAMKMSEKE TSSGEDQESE PKTESENQKE ENSP00000301972/1-859 ARDPQTLTDT TEEKRRNRLY ELAMKMSEKE TSSGEDQESE PKTESENQKE ENSBTAP00000012409/1-818 ARHPRASTDT TEEKRRNRLY ELARKMSEKE TSSGEDQESE PKTESENRKE bmy_15093T0/1-455 ---------- ---------- ---------- ---------- ---------- BACU015648/1-868 AQHPQASTDA AEEKRTNRLY ELAMKMSEKE TSSGEDQESE PKTESENQKE 701 750 ENSTTRP00000000153/1-851 SLSSEDNSQS VQEELKKKYS AVSLCNISTE VLKVINATEE LIAESTGPWE ENSP00000301972/1-859 SLSSEDNSQS VQEELKKKFS AVSLCNISTE VLKVINATEE LIAGSTGPWE ENSBTAP00000012409/1-818 SLSSEDNSQS VQEELKKKYS AVSLCNISTE VLKVINATEE LIAESAGPWE bmy_15093T0/1-455 ---------- ---------- ---------- ---------- ---------- BACU015648/1-868 SLSSEDNSQS VQEELKKKYS AVSLCNISTE VLKVINATEE LIAESTGPWE 751 800 ENSTTRP00000000153/1-851 FPPVPPDREK GTFPLGTDQV RLDEQLTSLE ENVYLAAGTV YGLEGQLSEL ENSP00000301972/1-859 SPQVPPDRQK GMFPRGTDQV RLDEQLTSLE ENVYLAAGTV YGLETQLTEL ENSBTAP00000012409/1-818 FPPVPPDREK GTFPLGTDQA RLDEQLTSLE ENVYLAAGTV YGLEGQLSEL bmy_15093T0/1-455 ---------- ---------- ---------- ---------- ---------- BACU015648/1-868 FPPVPPDREK GTFPLGTDQV RLDEQLTSLE ENVYLAAGTV YGLEGQLSEL 801 850 ENSTTRP00000000153/1-851 EDAARCIHSG TDETELADLE DQVATAAARV HHAEIQISDI ESRISALTIA ENSP00000301972/1-859 EDAARCIHSG TDETHLADLE DQVATAAAQV HHAELQISDI ESRISALTIA ENSBTAP00000012409/1-818 EDAARCIHSG TDETELADLE DQVATAAAQV HHAEIQISDI ESRISALTNA bmy_15093T0/1-455 ---------- ---------- ---------- ---------- ---------- BACU015648/1-868 EDAARCIHSG TDETELADLE DQVATAAARV HHAEIQISDI ESRISALTIA 851 900 ENSTTRP00000000153/1-851 GLNIAPCGRL TRKRDQKQRN QVQTIDTSRQ QRRKLPAPPV KA-KIEASSA ENSP00000301972/1-859 GLNIAPCVRF TRRRDQKQRT QVQTIDTSRQ QRRKLPAPPV KAEKIETSSV ENSBTAP00000012409/1-818 GLNIAPCGRL TRKRNQKQRN QVQTIDTSRH QRRKLPAPPV KAEKIEASST bmy_15093T0/1-455 -IKLGAC--- ---------- ---------- ---------- ---------- BACU015648/1-868 GLNIAPCGRL TRKRDQKQRN QVQTIDTSRQ QRRKLPAPPV KAEKIEASSA 901 950 ENSTTRP00000000153/1-851 TTIKTFNRNF ILQD-STNRT KERKSTTKDL IEPTLESAVR Y--- ENSP00000301972/1-859 TTIKTFNHNF ILQGSSTNRT KERKGTTKDL MEPALESAVM Y--- ENSBTAP00000012409/1-818 ATIKTFNRNF ILQDSSTNGT KERNSTPKDL IEPTLESAVM C--- bmy_15093T0/1-455 ------KHTH IFQ------- ---------- ---------- ---- BACU015648/1-868 TTIKTFNRNF ILQDSSTNRT KERKSTTKDL IVSHLYLNAN YCHC