KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:46:57 2014 Check: 00 .. Name: ENSTTRP00000002972/1-1203 Len: 1279 Check: 4735 Weight: 1.00 Name: ENSP00000349244/1-1238 Len: 1279 Check: 4873 Weight: 1.00 Name: bmy_21521T0/1-1219 Len: 1279 Check: 543 Weight: 1.00 Name: ENSBTAP00000012421/1-1239 Len: 1279 Check: 3927 Weight: 1.00 // 1 50 ENSTTRP00000002972/1-1203 ---------- ---------- ---------- ---------M GDSKEAGTEA ENSP00000349244/1-1238 ---------- ---------- ---------- ---------M GDAKEAGAEG bmy_21521T0/1-1219 SGACSAGPRR FWARQPVTAS RVELASPRLA SPRLTWTEVM GDSKEVGTEA ENSBTAP00000012421/1-1239 ---------- ---------- ---------- ---------M ADSKEAGAEA 51 100 ENSTTRP00000002972/1-1203 PPAGAAARGG LSLLSQGESE EPSAQGSALF LGGNEVKSRA VVKYSSAPPR ENSP00000349244/1-1238 PPAGAAARGG LSLLSQGESE ESSAQGSALF LGGNEVKSRA VVKYSSAPPR bmy_21521T0/1-1219 PPAGTSARGG LSLLSQGESE EPPAQGSALF LGGNEVKSRA VVKYSSAPPR ENSBTAP00000012421/1-1239 PPAGAAARGG LSLLSQGESE EPSAQGSALF LGGNEVKSRA VVKYSSAPPR 101 150 ENSTTRP00000002972/1-1203 TAFARLQEKT DLKLPPANWL RESAKLGPAG TTILGNSRKS KPFSSFGMAY ENSP00000349244/1-1238 TAFARLEEKT DLKLPPANWL RESAKLGPAG TTILGNSKKS KPFSSFGMAY bmy_21521T0/1-1219 TAFARLQEKT DLKLPPANWL RESAKLGPAG TTILGNSRKS KPFSSFGMAY ENSBTAP00000012421/1-1239 TAFARLEEKT DLKLPPANWL RESAKLGPAG TTILGNSRKS KPFSSFGMAY 151 200 ENSTTRP00000002972/1-1203 DFIDSVGNDV DVVSDSENIK KLLKIPYSKS HVSMAVHRIG RTLLLDELDI ENSP00000349244/1-1238 DFIDSVGNDV DVVSDSENIK KLLKIPYSKS HVSMAVHRIG RTLLLDELDI bmy_21521T0/1-1219 DFIDSVGNDV DVVSDSENIK KLLKIPYSKS HVSMAVHRIG RTLLLDELDI ENSBTAP00000012421/1-1239 DFIDSVGNDV DVVSDSENIK KLLKIPYSKS HVSMAVHRIG RTLLLDELDI 201 250 ENSTTRP00000002972/1-1203 QELFMRSSQT GDWTWLKEFY QRLIDQKWQR KKKSKEHWYQ KAILSKFLYY ENSP00000349244/1-1238 QELFMRSSQT GDWTWLKEFY QRLIDQKWQR KKKSKEHWYQ KAILSKFLYY bmy_21521T0/1-1219 QELFMRSSQT GDWTWLKEFY QRLIDQKWQR KKKSKEHWYQ KAILSKFLYY ENSBTAP00000012421/1-1239 QELFMRSSQT GDWTWLKEFY QRLIDQKWQR KKKSKEHWYQ KAILSKFLYY 251 300 ENSTTRP00000002972/1-1203 SINGDGAAQP VPSTAKQQKS SSADQTNDSD GASWPAPFEM PSSVSEDPSA ENSP00000349244/1-1238 SINGDGAAQP VSSTAEQQES SSSDQTNDSE GASWPAPFEM PSSVSEDPSA bmy_21521T0/1-1219 SINGDGAAQP VPSAAEQQES SSADQTNDSD GASWPAPFEM PSSVSEXPGA ENSBTAP00000012421/1-1239 SINGDGAAQP VPSATEQQES SSSDQTNDSD GASWPAPFEM PSSVSEDPSA 301 350 ENSTTRP00000002972/1-1203 S--------- ---------- ---------- -----SQGLK NDFARSILWT ENSP00000349244/1-1238 SSQGSEPLEP SYIVGHVASA PKEQNLITLF NDGEHSQGLK NDFVRNILWT bmy_21521T0/1-1219 SSQGGEPLEP SYIVGHVASA PKEQTLTTLF NDGENSQGLK NDFARNILWT ENSBTAP00000012421/1-1239 SSQGSEPLEP SYIVGHVASA PKEQNLTPLF NDGENSQGLK NDFVRNILWT 351 400 ENSTTRP00000002972/1-1203 FEDIHMLVGS NMPIFGGGRY PAVSLRLRDN NKPINVLTGI DYWLDNLICN ENSP00000349244/1-1238 FEDIHMLVGS NMPIFGGGRY PAVSLRLRDN NKPINVLTGI DYWLDNLICN bmy_21521T0/1-1219 FEDIHMLVGS NMPIFGGGRY PAVSLRLRDN NKPINVLTGI DYWLDNLICN ENSBTAP00000012421/1-1239 FEDIHMLVGS NMPIFGGGRY PAVSLRLRDN NKPINVLTGI DYWLDNLICN 401 450 ENSTTRP00000002972/1-1203 VPELVMCFHV NGIVQKYEMI KTEEIPNLEN SNFSTKVIKD IAQNILSFLK ENSP00000349244/1-1238 VPELVMCFHV NGIVQKYEMI KTEEIPNLEN SNFSTKVIKD IAQNILSFLK bmy_21521T0/1-1219 VPELVMCFHV NGIVQKYEMI KTEEIPNLEN SNFSTKVIKD IAQNILSFLK ENSBTAP00000012421/1-1239 VPELVMCFHV NGIVQKYEMI KTEEIPNLEN SNFSTKVIKD IAQNILSFLK 451 500 ENSTTRP00000002972/1-1203 SNCTKEGHTY WLFKASGSDI VKLYDLTTLC EETEDKYQNP FTMPVAILLY ENSP00000349244/1-1238 SNCTKEGHTY WLFKASGSDI VKLYDLTTLC EETEDKYQNP FTMPVAILLY bmy_21521T0/1-1219 SNCTKEGHTY WLFKASGSDI VKLYDLTTLC EETEDKYQNP FTMPVAILLY ENSBTAP00000012421/1-1239 SNCTKEGHTY WLFKASGSDI VKLYDLTTLC EETEDKYQNP FTMPVAILLY 501 550 ENSTTRP00000002972/1-1203 KVACNMMMKK NQNKKHYGTV RTLLLNCVKL LDKGRHPQII ASANYMLSEL ENSP00000349244/1-1238 KVACNMMMKK NQNKKHYGTI RTLLLNCLKL LDKSRHPQII ASANYMLSEL bmy_21521T0/1-1219 KVACNMMMKK NQNKKHYGTV RTLLLNCVKL LDKSRHPQII ASANYMLSEL ENSBTAP00000012421/1-1239 KVACNMMMKK NQNKKHYGTV RTLLLNCVKL LDKSRHPQII ASANYMLSEL 551 600 ENSTTRP00000002972/1-1203 FQLDEPKK-E SSESPLNENS DESYSEEEEE MPDSDENVSY STCSDPSDDN ENSP00000349244/1-1238 FQLDEPKKEE NSESPLNENS DESYSEEEEE MPDSDENGSY STSSDPSDDS bmy_21521T0/1-1219 FQLDEPKKEE SSESPLNENS DESYSEEEEE MPDSDENGSY STCSDPSDDN ENSBTAP00000012421/1-1239 FQLDEPKKEE SSESPLNENS DESYSEEEEE MPDSDENGSY STSSDPSDDN 601 650 ENSTTRP00000002972/1-1203 KAVAIIKSVG ELSVPEKYKS IHQIRPSCAF PVCHDTEERC RLVLTYVLEG ENSP00000349244/1-1238 KAVAIIKSVG ELSVPEKYKS IHQIRPSCAF PVCHDTEERC RLVLSYVLEG bmy_21521T0/1-1219 KAVAIIKSVG ELSVPEKYKS IHQIRPSCAF PVCHDTEERC RLVLSYVLEG ENSBTAP00000012421/1-1239 KAVAIIKSVG ELSVPEKYKS IHQIRPSCAF PVCHDTEERC RLVLSYVLEG 651 700 ENSTTRP00000002972/1-1203 LKSVDSSIKK ESDLPAADPN TPIPLKYEDE STRGGPEGLE KQMALFLDKM ENSP00000349244/1-1238 LKSVDSSIKK ESDLPAADPS TPIPLKYEDE SSRGGPEGLE KQMALFLDKM bmy_21521T0/1-1219 LKSVDSSIKK ESDLPAADPN TPIPLKYEDE STRGGPEGLE KQMALFLDKM ENSBTAP00000012421/1-1239 LKSVDSSIKK ESDLPAADPN TPIPLKYEDE STRGGPEGLE KQMALFLDKM 701 750 ENSTTRP00000002972/1-1203 GSLQKGNYSS QSGMIPGSWQ HKMKLQLILK SSKAYYVLSD AAMSLQKYGR ENSP00000349244/1-1238 GSLQKGNYSS QSGMIPGSWQ HKMKLQLILK SSKAYYVLSD AAMSLQKYGR bmy_21521T0/1-1219 GSLQKGNYSS QSGMIPGSWQ HKMKLQLILK SSKAYYVLSD AAMSLQKYGR ENSBTAP00000012421/1-1239 GSLQKGNYSS QSGMIPGSWQ HKMKLQLILK SSKAYYVLSD AAMSLQKYGR 751 800 ENSTTRP00000002972/1-1203 ALRYIKLALQ SHDTYCCLCT NMLSEVLLFL SQYLTLCGDI QLMLAQNANN ENSP00000349244/1-1238 ALRYIKLALQ SHDTYCCLCT NMLSEVLLFL SQYLTLCGDI QLMLAQNANN bmy_21521T0/1-1219 ALRYIKLALQ SHDTYCCLCT NMLSEVLLFL SQYLTLCGDI QLMLAQNANN ENSBTAP00000012421/1-1239 ALRYIKLALQ SHDTYCCLCT NMLSEVLLFL SQYLTLCGDI QLMLAQNASN 801 850 ENSTTRP00000002972/1-1203 RAAHLEEFNY QTKEDQEILH SLHRESSCQG FAWATDLSTD LESQLSVSCK ENSP00000349244/1-1238 RAAHLEEFHY QTKEDQEILH SLHRESSCQG FAWATDLSTD LESQLSVSCK bmy_21521T0/1-1219 RAAHLEEFNY QTKEDQEILH SLHRESNCQG FAWATDLSTD LESQLSVSCK ENSBTAP00000012421/1-1239 RAAHLEEFNY QTKEDQEILH SLHRESSCQG FAWATDLSTD LESQLSVSCK 851 900 ENSTTRP00000002972/1-1203 CYEAANEILQ FSDLKSQNPE QYIQVLKRMG NIRNEIGVFY MNQAAALQSE ENSP00000349244/1-1238 CYEAANEILQ FSDLKSQNPE HYVQVLKRMG NIRNEIGVFY MNQAAALQSE bmy_21521T0/1-1219 CYEAANEILQ FSDLKSQNPE QYIQVLKRMG NIRNEIGVFY MNQAAALQSE ENSBTAP00000012421/1-1239 CYEAANEILQ FSDLKSQNPE HYVQVLKRMG NIRNEIGVFY MNQAAALQSE 901 950 ENSTTRP00000002972/1-1203 RI--VSKTVS TAEQQLWKKS FSCFEKGIHN FESIDDVTNA ALLLCNTGRL ENSP00000349244/1-1238 RL--VSKSVS AAEQQLWKKS FSCFEKGIHN FESIEDATNA ALLLCNTGRL bmy_21521T0/1-1219 RV--VSKTVS TAEQQLWKKS FSCFEKGIHN FESIDDATNA ALLLCNTGRL ENSBTAP00000012421/1-1239 RLGKVSKTVS TAEQQLWKKS FSCFEKGIHN FESIDDATNA ALLLCNTGRL 951 1000 ENSTTRP00000002972/1-1203 MRICAQAHCG AGDEFKREFS PEEGLYYNKA VDYYLKALRS LGTRDTHSAV ENSP00000349244/1-1238 MRICAQAHCG AGDELKREFS PEEGLYYNKA IDYYLKALRS LGTRDIHPAV bmy_21521T0/1-1219 MRICAQAHCG AGDEFKREFS PEEGLYYNKA VDYYLKALRS LGTRDTHPAV ENSBTAP00000012421/1-1239 MRICAQAHCG AGDEFKREFS PEEGLYYNKA VDYYLKALRS LGTRDIHPAV 1001 1050 ENSTTRP00000002972/1-1203 WDSVNWELST TYFTMATLQQ DYAPLSRKAQ EQIEKEVSEA MMKSLKYCDV ENSP00000349244/1-1238 WDSVNWELST TYFTMATLQQ DYAPLSRKAQ EQIEKEVSEA MMKSLKYCDV bmy_21521T0/1-1219 WDSVNWELST TYFTMATLQQ DYAPLSRKAQ EQIEKEVSEA MXKSLKYCDV ENSBTAP00000012421/1-1239 WDSVNWELST TYFTMATLQQ DYAPLSRKAQ EQIEKEVSEA MMKSLKYCDV 1051 1100 ENSTTRP00000002972/1-1203 DLVSARQPLC QYRAATIHHR LASMYHSCLR NQVGDEYLRK QHRVLADLHY ENSP00000349244/1-1238 DSVSARQPLC QYRAATIHHR LASMYHSCLR NQVGDEHLRK QHRVLADLHY bmy_21521T0/1-1219 DLVSARQPLC QYRAATIHHR LASMYHSCLR NQVGDEHLRK QHRVLADLHY ENSBTAP00000012421/1-1239 DSVSARQPLC QYRAATIHHR LASMYHSCLR NQVGDEQLRK QHRVLADLHY 1101 1150 ENSTTRP00000002972/1-1203 SKAVKLFQLL KDAPCELLRV QLERVAFAEF QMTXXXXXXX XXXXXXXXXX ENSP00000349244/1-1238 SKAAKLFQLL KDAPCELLRV QLERVAFAEF QMTSQNSNVG KLKTLSGALD bmy_21521T0/1-1219 SKAVKLFQLL KDAPCELLRV QLERVAFAEF QMTSQNSNIG KLKTLSGALD ENSBTAP00000012421/1-1239 SKAGKLFQLL KDAPCELLRV QLERVAFAEF QMTSQNSNVG KLKTLSGALD 1151 1200 ENSTTRP00000002972/1-1203 XXXXXXXXXX XXXXXXXXXX XXPKSEEAPP AADSSPSLSR EEVIKLLGIF ENSP00000349244/1-1238 IMVRTEHAFQ LIQKELIEEF GQPKSGDAAA AADASPSLNR EEVMKLLSIF bmy_21521T0/1-1219 IMVRTKHAFQ LIRKELVEEF DQPKSEETPP AADSS-SLNR EEVIKLLGIF ENSBTAP00000012421/1-1239 IMVRTKHAFQ LIRKELVEEF EQPKSEETPP AADSSPSLNR EEVTKLLSIF 1201 1250 ENSTTRP00000002972/1-1203 ESRLSFLLLQ SIKLLSSTKK KTXXXXXXXX XXXXXXXXXX XLLRATANKN ENSP00000349244/1-1238 ESRLSFLLLQ SIKLLSSTKK KTSNNIEDDT ILKTNKHIYS QLLRATANKT bmy_21521T0/1-1219 ESRLSFLLLQ SIKLLSSTKK KT-------- ---------- ---------- ENSBTAP00000012421/1-1239 ESRLSFLLLQ SIKLLSSTKK KTSSILDEDI VLKTNKQVYS QLLRATANKN 1251 1300 ENSTTRP00000002972/1-1203 ASLLERIDVL VHLLDQLARG SGGDGGALQ ENSP00000349244/1-1238 ATLLERINVI VHLLGQLAAG SAASSNAVQ bmy_21521T0/1-1219 ---------- ---------- --------- ENSBTAP00000012421/1-1239 ASLLERVDLL IHLLDQLACG R-GSSAVVQ