KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:00 2014 Check: 00 .. Name: bmy_06786T0/1-259 Len: 403 Check: 384 Weight: 1.00 Name: ENSBTAP00000012430/1-396 Len: 403 Check: 5936 Weight: 1.00 Name: ENSTTRP00000001943/1-394 Len: 403 Check: 6928 Weight: 1.00 Name: ENSP00000372067/1-394 Len: 403 Check: 5605 Weight: 1.00 Name: BACU003109/1-341 Len: 403 Check: 7821 Weight: 1.00 // 1 50 bmy_06786T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012430/1-396 KGEEEGGRSL RGQEVAAVHT CPSSFLQVSS PPSQPPQPVV PAKPVQCVHH ENSTTRP00000001943/1-394 MGMKHSSRCL LLRRKMAENT AENT--EVSS PPSQPPQPVV PAKPVQCVHH ENSP00000372067/1-394 MGMKHSSRCL LLRRKMAENA AEST--EVNS PPSQPPQPVV PAKPVQCVHH BACU003109/1-341 -----MSKLL XXXXXX---- ---------- ---------- ---------- 51 100 bmy_06786T0/1-259 ---------- ------MAPG QGAQKVWLWG SYFP------ ---------- ENSBTAP00000012430/1-396 VSTQPSCPGR GKMSKLLNPE EMTSRDYYFD SYAHFGIHEE MLKDEVRTLT ENSTTRP00000001943/1-394 VSTQPSCPGR GKMSKLLNPE EMTSRDYYFD SYAHFGIHEE MLKDEVRTLT ENSP00000372067/1-394 VSTQPSCPGR GKMSKLLNPE EMTSRDYYFD SYAHFGIHEE MLKDEVRTLT BACU003109/1-341 ---------- ------LNPE EMTSRDYYFD SYAHFGIHEE MLKDEVRTLT 101 150 bmy_06786T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012430/1-396 YRNSMYHNKH VFKDKVVLDV GSGTGILSMF AAKAGAKKVF GIECSSISDY ENSTTRP00000001943/1-394 YRNSMYHNKH VFKDKVVLDV GSGTGILSMF AAKAGAKKVF GIECSSISDY ENSP00000372067/1-394 YRNSMYHNKH VFKDKVVLDV GSGTGILSMF AAKAGAKKVF GIECSSISDY BACU003109/1-341 YRNSMYHNKH VFKDKVVLDV GSGTGILSMF AAKAGAKKVF GIECSSISDY 151 200 bmy_06786T0/1-259 ---------- --VITIFKGK VEEVELPVEK VDIIISEWMG YCLFYESMLN ENSBTAP00000012430/1-396 SEKIIKANHL DNIITIFKGK VEEVELPVEK VDIIISEWMG YCLFYESMLA ENSTTRP00000001943/1-394 SEKIIKANHL DNIITIFKGK VEEVELPEEK VDIIISEWMG YCLFYESMLN ENSP00000372067/1-394 SEKIIKANHL DNIITIFKGK VEEVELPVEK VDIIISEWMG YCLFYESMLN BACU003109/1-341 SEKIIKANHL DNIITIFKGK VEEVELPVEK VDIIISEWMG YCLFYESMLN 201 250 bmy_06786T0/1-259 TVIFARDKWL KPGGLMFPDR AALYVVAIED RQYKDFKIHW WENVYGFDMT ENSBTAP00000012430/1-396 TVIFARDKWL KPGGLMFPDR AALYVVAIED RQYKDFKIHW WENVYGFDMT ENSTTRP00000001943/1-394 TVIFARDKWL KPGGLMFPDR AALYVVAIED RQYKDFKIHW WENVYGFDMT ENSP00000372067/1-394 TVIFARDKWL KPGGLMFPDR AALYVVAIED RQYKDFKIHW WENVYGFDMT BACU003109/1-341 TVIFARDKWL KPGGLMFPDR AALYVVAIED RQYKDFKIHW WENVYGFDMT 251 300 bmy_06786T0/1-259 CIRDVAMKEP LVDIVDPKQV VTNACLIKEV DIYTVKTEEL SFTSAFCLQI ENSBTAP00000012430/1-396 CIRDVAMKEP LVDIVDPKQV VTNACLIKEV DIYTVKTEEL SFTSAFCLQV ENSTTRP00000001943/1-394 CIRDVAMKEP LVDIVDPKQV VTNACLIKEV DIYTVKTEEL SFTSAFCLQI ENSP00000372067/1-394 CIRDVAMKEP LVDIVDPKQV VTNACLIKEV DIYTVKTEEL SFTSAFCLQI BACU003109/1-341 CIRDVAMKEP LVDIVDPKQV VTNACLIKEV DIYTVKTEEL SFTSAFCLQI 301 350 bmy_06786T0/1-259 QRNDYVHALV TYFNIEFTKC HKKMGFSTAP DAPYTHWKQT VFYLEDYLTV ENSBTAP00000012430/1-396 QRNDYVHALV TYFNIEFTKC HKKMGFSTAP DAPYTHWKQT VFYLEDYLTV ENSTTRP00000001943/1-394 QRNDYVHALV TYFNIEFTKC HKKMGFSTAP DAPYTHWKQT VFYLEDYLTV ENSP00000372067/1-394 QRNDYVHALV TYFNIEFTKC HKKMGFSTAP DAPYTHWKQT VFYLEDYLTV BACU003109/1-341 QRNDYVHALV TYFNIEFTKC HKKMGFSTAP DAPYTHWKQT VFYLEDYLTV 351 400 bmy_06786T0/1-259 RRGEEIYGTI SMKPNAKNVV SADAVSRDLD FTVDLDFKGQ LCETSVSNYY ENSBTAP00000012430/1-396 RRGEEIYGTI SMKPNAKNV- ------RDLD FTVDLDFKGQ LCETSVSNYY ENSTTRP00000001943/1-394 RRGEEIYGTI SMKPNAKNV- ------RDLD FTVDLDFKGQ LCETSVSNYY ENSP00000372067/1-394 RRGEEIYGTI SMKPNAKNV- ------RDLD FTVDLDFKGQ LCETSVSNDY BACU003109/1-341 RRGEEIYGTI SMKPNAKNV- ------RDLD FTVDLDFKGQ LCETSVSNYY 401 450 bmy_06786T0/1-259 KMR ENSBTAP00000012430/1-396 KMR ENSTTRP00000001943/1-394 KMR ENSP00000372067/1-394 KMR BACU003109/1-341 KMR