KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:47:01 2014 Check: 00 .. Name: ENSP00000403910/1-263 Len: 269 Check: 489 Weight: 1.00 Name: ENSTTRP00000012212/1-259 Len: 269 Check: 3382 Weight: 1.00 Name: bmy_22610T0/1-185 Len: 269 Check: 4445 Weight: 1.00 Name: ENSBTAP00000012434/1-262 Len: 269 Check: 2603 Weight: 1.00 // 1 50 ENSP00000403910/1-263 MWDLVLEDRR MNSLRLVAPM WNGRIRGIHR LGAAVAPEGN QKKKRTILQF ENSTTRP00000012212/1-259 ------MAAP GAXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_22610T0/1-185 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012434/1-262 ------MAAP RASLRLVAPV WNRGTSGIRG LSKAVDPEGS QKKGRTLLQF 51 100 ENSP00000403910/1-263 LTNYFYDVEA LRDYLLQREM YKVHEKNRSY TWLEKQHGPY GAGAFFILKQ ENSTTRP00000012212/1-259 XXXXXXXXXX XXXXXXXXXX XXXXXXXXSS TYIKERYGPY VAGAYFILKQ bmy_22610T0/1-185 ---------- ---------- --------SF TYIKERYGPY VAGASFILKQ ENSBTAP00000012434/1-262 LTDHFYDVEA VREYLLRKQV LKVQKKNRSF TYIKERYGPY VAGAYFVLKQ 101 150 ENSP00000403910/1-263 GGAVKF-RDK EWIRPDKYGH FSQEFWNFCE VPVEAVDAGD CDINYEGLDN ENSTTRP00000012212/1-259 GGAVXXXXXX XXXXXXXXXX XXXXXXXXXX XXIEAVDASG CAITYQGLDN bmy_22610T0/1-185 GGAVKF-QDK EWMRPNGRGL SG-ELWKLRE VPVEAVDASG CAINYQGLDN ENSBTAP00000012434/1-262 GGAVKF-RDR EWMRANEQGL SSLEFRKLQE VPVEAVDASG CAINYQGLDN 151 200 ENSP00000403910/1-263 LLRLKELQSL SLQRCCHVDD WCLSRLYPLA DSLQELSLAG CPRISERGLA ENSTTRP00000012212/1-259 LLALKELQSL SLQCCLHVDD WCLSRLYQLA NSLRELSLAG CPRISERGLA bmy_22610T0/1-185 LLALRELQSL SLRCCPHVDD WCLSRLHQLA DSLRELSLAG CPRISERGLA ENSBTAP00000012434/1-262 LLALKELQSL SLRRCPHVDD WCLGRLYQLA DSLQELSLAG CPRISERGLA 201 250 ENSP00000403910/1-263 CLHHLQNLRR LDISDLPAVS NPGLTQILVE EMLPNCEVVG VDWAEGLKSG ENSTTRP00000012212/1-259 CLHHLQNLRR LDISHLPAVS NPGLTQILVE EMLPNCEVLG ADWAQGLKLG bmy_22610T0/1-185 CLHHLQNLRR LDISDLPAVS NPGLTQILVE EMLPDCEVLG ADWAQGLKLG ENSBTAP00000012434/1-262 CLHHLQNLRR LDISDLPAVS NPGLTQILVE EMLPHCEVLG ADWAQGLKVG 251 300 ENSP00000403910/1-263 PEEQPRDTA- SPVPA---- ENSTTRP00000012212/1-259 PEEQSRDTAS SPIPA---- bmy_22610T0/1-185 PEEQPRDTAS SPIPA---- ENSBTAP00000012434/1-262 PEEQSRDAAS SPIPAWPSA