KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:01 2014 Check: 00 .. Name: ENSBTAP00000012454/1-277 Len: 453 Check: 4409 Weight: 1.00 Name: ENSTTRP00000014063/1-338 Len: 453 Check: 4556 Weight: 1.00 Name: ENSP00000327070/1-338 Len: 453 Check: 1875 Weight: 1.00 Name: BACU020255/1-315 Len: 453 Check: 1998 Weight: 1.00 Name: bmy_17496T0/1-444 Len: 453 Check: 4859 Weight: 1.00 // 1 50 ENSBTAP00000012454/1-277 ---------- ---------- ---------- ---------- -MLSALARPA ENSTTRP00000014063/1-338 ---------- ---------- ---------- ---------- -MLSALARPA ENSP00000327070/1-338 ---------- ---------- ---------- ---------- -MLSALARPA BACU020255/1-315 ---------- ---------- ---------- ---------- ---------- bmy_17496T0/1-444 GHSREARRSR AGRSGAAWRS LETVSCCQLL RRSVRAPPVS AMLSALARPA 51 100 ENSBTAP00000012454/1-277 GAALRRSFST SAQNNAKVAV LGASGGIGQP LSLLLKNSPL VSRLTLYDIA ENSTTRP00000014063/1-338 SAALRRSFST SAQNNAKVAV LGASGGIGQP LSLLLKNSPL VSRLTLYDIA ENSP00000327070/1-338 SAALRRSFST SAQNNAKVAV LGASGGIGQP LSLLLKNSPL VSRLTLYDIA BACU020255/1-315 ---------- ---NNAKVAV LGASGGIGQP LSLLLKNSPL VSRLTLYDIA bmy_17496T0/1-444 SAALRRSFST SAQNNAKVAV LGASGGIGQP LSLLLKNSPL VSRLTLYDIA 101 150 ENSBTAP00000012454/1-277 HTPGVAADLS HIETRATVKG YLGPEQLPDC LKGCDVVVIP AGVPRKPG-- ENSTTRP00000014063/1-338 HTPGVAADLS HIETRATVKX XXXXXXXXXX XXXXXXXXXX XXXXXXXX-- ENSP00000327070/1-338 HTPGVAADLS HIETKAAVKG YLGPEQLPDC LKGCDVVVIP AGVPRKPG-- BACU020255/1-315 HTPGVAADLS HIETRATVKG ---------- IEHADPGELT SLLPRRPGFR bmy_17496T0/1-444 HTPGVAADLS HIETRATVKG YLGPEQLPDC LKGCDVVVIP AGVPRKPG-- 151 200 ENSBTAP00000012454/1-277 -------MTR DDLFNTNATI VATLTAACAQ HCPEAMICII SNPVNSTIPI ENSTTRP00000014063/1-338 -------MTR DDLFNTNATI VATLTAACAQ HCPEAMICII ANPVNSTIPI ENSP00000327070/1-338 -------MTR DDLFNTNATI VATLTAACAQ HCPEAMICVI ANPVNSTIPI BACU020255/1-315 FRVRFLSMTR DDLFNTNATI VATLTAACAQ HCPEATICII SNPVNSTIPI bmy_17496T0/1-444 -------MTR DDLFNTNATI VATLTAACAQ HCPEAMICII SNPVNSTIPI 201 250 ENSBTAP00000012454/1-277 TAEVFKKHGV YNPNKIFGVT TLDIVRANAF VAELKDLDPA RVN------- ENSTTRP00000014063/1-338 TAEVFKKHGV YNPSKIFGVT TLDIVRANTF VAELKGLDPA RVSVPVIGGH ENSP00000327070/1-338 TAEVFKKHGV YNPNKIFGVT TLDIVRANTF VAELKGLDPA RVNVPVIGGH BACU020255/1-315 TAEVFKKHGV YNPNKIFGVT TLDIVRANTF VAELKGLDPA RVNVPVIGGH bmy_17496T0/1-444 TAEVFKKHGV YNPNKIFGVT TLDIVRANTF VAELKGLDPA RVNVPVIGGH 251 300 ENSBTAP00000012454/1-277 -PRHRRPRWE NHHP-LDLP- --VHPQGGIS PGPADHPHRS DPGSWHRGGQ ENSTTRP00000014063/1-338 AGKTIIPLVS QCTPKVDFPQ DQLTPLIGRI QEAGTEVVKA KAGA------ ENSP00000327070/1-338 AGKTIIPLIS QCTPKVDFPQ DQLTALTGRI QEAGTEVVKA KAGA------ BACU020255/1-315 AGKTIIPLIS QCTPKVDFPQ DQLTTLIGRI QEAGTEVVKA KAGA------ bmy_17496T0/1-444 AGKTIIPLIS QCTPKVDFPQ DQLTTLIGRI QEAGTEVVKA KAGAGRLSGS 301 350 ENSBTAP00000012454/1-277 G--------- ---------- ---------- ---------- ---------- ENSTTRP00000014063/1-338 ---------- ---------- ---------- ---------- ---------- ENSP00000327070/1-338 ---------- ---------- ---------- ---------- ---------- BACU020255/1-315 ---------- ---------- ---------- ---------- ---------- bmy_17496T0/1-444 PGLLEAEPKT HEGPARSGSF SKFHVHLLDK QHPSQRAAQL AGGRGVVFEV 351 400 ENSBTAP00000012454/1-277 --------EG RSGLCHPVHG IRW------- ---------- ---------- ENSTTRP00000014063/1-338 ---------G SATLSMAYAG ARFVFSLVDA MNGKEGVVEC SFVKSQETDC ENSP00000327070/1-338 ---------G SATLSMAYAG ARFVFSLVDA MNGKEGVVEC SFVKSQETEC BACU020255/1-315 ---------G SATLSMAYAG ARFVFSLVDA MNGKEGVIEC SFIKSQETDC bmy_17496T0/1-444 SRANSMPFEG SATLSMAYAG ARFVFSLVDA MNGKEGVIEC SFIKSQETDC 401 450 ENSBTAP00000012454/1-277 ----SPLCLL PRGRDEWKGR SR------RM F--------- ---------- ENSTTRP00000014063/1-338 PYFSTPLLLG KKGIEKNLGI GKISPFEEKM IAEAIPELKA SIKKGEEFVK ENSP00000327070/1-338 TYFSTPLLLG KKGIEKNLGI GKVSSFEEKM ISDAIPELKA SIKKGEDFVK BACU020255/1-315 PYFSTPLLLG KKGIEKNLGI GKISPFEEKM IAEAIPELKA SIKKGEEFVK bmy_17496T0/1-444 PYFSTPLLLG KKGIEKNLGI GKISPFEEKM IAEAIPELKA SIKKGEEFVK 451 500 ENSBTAP00000012454/1-277 -LR ENSTTRP00000014063/1-338 NMK ENSP00000327070/1-338 TLK BACU020255/1-315 NMK bmy_17496T0/1-444 NMK