KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:47:02 2014 Check: 00 .. Name: bmy_09822T0/1-850 Len: 1150 Check: 4099 Weight: 1.00 Name: ENSBTAP00000012468/1-1139 Len: 1150 Check: 1342 Weight: 1.00 Name: BACU000668/1-1067 Len: 1150 Check: 1208 Weight: 1.00 Name: ENSTTRP00000014045/1-1102 Len: 1150 Check: 2238 Weight: 1.00 // 1 50 bmy_09822T0/1-850 MNKTSLEDKM TTAAERKYIN IRKRLDQLGY RQTLTVECLP LVEKLFSDLV ENSBTAP00000012468/1-1139 ---------M TTAAERKYLN IRKRLDQLGY RQTLTVDCIP LVEKLFSDLV BACU000668/1-1067 ---------M TTAAERKYIN IRKRLDQLGY RQTLTVECLP LVEKLFSDLV ENSTTRP00000014045/1-1102 ---------M TTAAERKYIN IRKRLDQLGY RQTLTVECLP LVEKLFSDLV 51 100 bmy_09822T0/1-850 HTTESLRKSK LSAVKAEKES ANFDFVLEPY KLENARLSKE NNELYLELMK ENSBTAP00000012468/1-1139 HTTESLRKSK LSAVKAEKES ANFDFVLEPY KLENARLSKE NNELYLELMK BACU000668/1-1067 HTTESLRKSK LSAVKAEKES ANFDFVLEPY KLENARLSKE NNELYLELMK ENSTTRP00000014045/1-1102 HTTESLRKSK LSAVKAEKES ANFDFVLEPY KLENARLSKE NNELYLELMK 101 150 bmy_09822T0/1-850 LREQSGQHIK ELKTTLKKCA RETADLKFLN NQYVHKLKLL EKESKAKNEK ENSBTAP00000012468/1-1139 LREQSGQHIK ELKTTLKKCA RETADLKFLN NQYVHKLKLM EKESKAKNEK BACU000668/1-1067 LREQSGQHIK ELKTTLKKCA RETSDLKFLN NQYVHKLKLL EKESKAKNEK ENSTTRP00000014045/1-1102 LREQSGQHIK ELKTTLKKCA RETADLKFLN NQYVHKLKLL EKESKAKNEK 151 200 bmy_09822T0/1-850 IQQLQEKNLQ AVVQTPGGKK RSIAFRRQRM QIDEPVPPSE VSSYPVPQPD ENSBTAP00000012468/1-1139 IQQLQEKNLQ AVVQTPGGKK RNIAFRRQRM QIDEPVPPSE ISSYPVPQPD BACU000668/1-1067 IQQLQEKNLQ AVVQTPGGKK RSIAFRRQRM QIDEPVPPSE VSSYPVPQPD ENSTTRP00000014045/1-1102 IQQLQEKNLQ AIVQTPGGKK RSIAFRRQRM QIDEPVPPSE VSSYPVPQPD 201 250 bmy_09822T0/1-850 DP-------- ----IQELQQ EVYQLQEKLA VMESGLRDYN KQIELREREI ENSBTAP00000012468/1-1139 DPYIADLLHV ADNRIQELQQ EVCQLQEKLA MMESELRDYN KQIELREREI BACU000668/1-1067 DPYIADLLQV ADNRIQELQQ EVYQLQEKLA VMESGLRDYN KQIELREREI ENSTTRP00000014045/1-1102 DPYIADLLQV ADNRIQELQQ EVYQLQEKLA VMESGLRDYN KQIELREREI 251 300 bmy_09822T0/1-850 ERLSVALDGG RSPDILSLET RNKANEKLIA HLNIQ----- ---------- ENSBTAP00000012468/1-1139 ERLSIALDGG RSSDILSLET RNKANEKLIA HLNIQVDFLQ QANKDLEKHI BACU000668/1-1067 ERLSVALDGG RSPDILSLET RNKANEKLIA HLNIQ----- ---------- ENSTTRP00000014045/1-1102 ERLSVALDGG RSPDILSLET KNKANEKLIA HLNIQVDFLQ QANKDLEKHI 301 350 bmy_09822T0/1-850 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012468/1-1139 QELMETKETV TSEVVNLSNK NEKLCQELTE IDQLAQQLER HKEEVLKTAD BACU000668/1-1067 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014045/1-1102 QELMETKETV TTEVVNLSNK NEKLCQELTE IDQLAQQLER HKEEVLETAD 351 400 bmy_09822T0/1-850 ---------- ---------- ---------E LNLCHKEKER LSDELLIKSD ENSBTAP00000012468/1-1139 KELEEAKKEI KKKLSEMRNL EETIGKLQLE LSLCHKEKER LSDELLIKSD BACU000668/1-1067 -------KEI KKKLSEVRNL EETMGKLQLE LNLCHKEKER LSDELLIKSD ENSTTRP00000014045/1-1102 KELEEAKKEI KKKLSEMQNL EETM-KLQLE LNLCHKEKER LSDELLIKSD 401 450 bmy_09822T0/1-850 LETVVHQLEQ EKQRLNKKIE SFAVTEKELT LEVERMRLEH GIKRRDKSPS ENSBTAP00000012468/1-1139 LETVVHQLEQ EKQRLNKKIE SFAVTERELT VEIERMRLEH GIKRRDKSPS BACU000668/1-1067 LETVVHQLEQ EKQRLNKKIE SFAVTEKELT LEVERMRLEH GIKRRDKSPS ENSTTRP00000014045/1-1102 LQTVVHQLE- EKQRLNKKIE SFAT--RELT LEVERMRLEH GIKRRDKSPS 451 500 bmy_09822T0/1-850 RLDTFLKGIE DERDFYKKEL ERLQHLIQRR SCSRSHSTCE KIPVFKTLEK ENSBTAP00000012468/1-1139 RLDTFLKGIE DERDFYKKEL EKLQHIIQRR SCSRSHSTCE KTPVFKTLEK BACU000668/1-1067 RLDTFLKGIE DERDFYKKEL ERLQHLIQRR SCSRSHSTCE KIPVFKTLEK ENSTTRP00000014045/1-1102 RLDTFLKGIE DERDFYKKEL ERLQHLIQRR SCSRSHSTCE KIPVIKTLEK 501 550 bmy_09822T0/1-850 GDYNSEIHLI TRERDELQHM LERFEKHMED IQSNVKLLTA ERDKLSVLYN ENSBTAP00000012468/1-1139 GDYDSDIHLI TRERDELQRM LERFEKHMVD IQSNVKLLTA ERDKLSVLYN BACU000668/1-1067 GDYNSEIHLI TRERDELQHM LERFEKHMED IQSNVKLLTA ERDKLSVLYN ENSTTRP00000014045/1-1102 GDYNSEIHVI TRERDELQHM LERFEKHMED IQSNVKLLTA ERDKLSVLYN 551 600 bmy_09822T0/1-850 E--------- ---------- ---------- ---------- ---------- ENSBTAP00000012468/1-1139 EAQEELSALK QDSTQTTVSH NTISLIEKEK ELALSDLRRI MAEKEALKDK BACU000668/1-1067 EAQEELSALR QESTQTTVSH NTVSLMEKEK ELALSDLRRI MAEKEALKEK ENSTTRP00000014045/1-1102 EAQEELSALR QESAQTTVSH NTVSLMEKEK ELALSDLRRI MAEREALKEK 601 650 bmy_09822T0/1-850 --HLHEMSVF EKSELEKTVE HLTCVNHQLE NEKCELKSKM LKMKETIEAL ENSBTAP00000012468/1-1139 LKHLQEMSVF GKSELEKTIE HLTCVNHQLE NEKCELKSKI FIMKETMESL BACU000668/1-1067 LKHLHEMSIF EKSELEKTVE HLTCVNHQLE NEKCELKSKM LKMKETIEAL ENSTTRP00000014045/1-1102 LKNLHEMSIL GKSELEKTVE HLTCVNHQLE NEKCELKSKM LKMKETIESL 651 700 bmy_09822T0/1-850 EKKVKLQAQK LSHVAGDSSH QKTEMNSLRL VNEQLQRSLE DSQHQLAMKR ENSBTAP00000012468/1-1139 EKKAKFQAQK LSHVAGDSSH QKTEMNSLRL VNEQLQRSLE DYQHRLNMKR BACU000668/1-1067 EKKIKLQTQK LSHVAGDSSH QKTEMNSLRL VNEQLQRSLE DSQHQLSMKR ENSTTRP00000014045/1-1102 EKKVKLQAQK LSHVAGDSSH QKTEMNSLRL VNEQLQRSLE DHQHQLSMKR 701 750 bmy_09822T0/1-850 SELESAQAQV KILEEKIGKL HLKMTSQNEE AHVMKKTIGV IDKEKDILQE ENSBTAP00000012468/1-1139 SELESAQAQV KILEEKIGKL HLRMTSQNEE AHVMKKTIGV IDKEKDILQE BACU000668/1-1067 SELESAQAQV KILEEKIGKL HFKMTSQNEE AHVMKKTIGV IDKEKDILQE ENSTTRP00000014045/1-1102 SELESAQAQV KILEEKIDKL HFKMTSQNEE AHVMKKTIGV IDKEKDILQE 751 800 bmy_09822T0/1-850 TVDEKTEKIA NLHENLANKE KAITQMKITV SEYESSMKVS NEYNCSPLTI ENSBTAP00000012468/1-1139 TVDEKTEKIA NLHENLASKE KTITQMKITV SEYESSLNHL KETLINRDRE BACU000668/1-1067 TVDEKTEKIA NLHENLANKE KAISQMKITV SEYESSMNHL KETLINRDRE ENSTTRP00000014045/1-1102 TVDEKTEKIA NLHENLANKE KAITQMKITV SEYESSMNHL KETLINRDRE 801 850 bmy_09822T0/1-850 VVFVARNPEA GSMVFSMAEI G--------- ---------- ------QISL ENSBTAP00000012468/1-1139 ISSLRRQLDA AHK--ELDEV GRSKEMSFKE NRRLQDDLAT MARENQQISL BACU000668/1-1067 ISSLRRQLDA AHK--ELDEV GRSKEMSFKE NRRLQHDLAT VARENQQISL ENSTTRP00000014045/1-1102 ISSLRRQLDA AHK--ELDEV GRSKEMSFKE NRRLQDDLAT VARENQQISL 851 900 bmy_09822T0/1-850 ELEAAVQEKE EMKSRVHNYI TEVSRWESLM AAKERENQDL LDRFQMLHDR ENSBTAP00000012468/1-1139 ELEAAVQEKE EMKSRVHNYI TEVSRWESLM AAKEKENQDL LDRFQMLHNR BACU000668/1-1067 ELEAAVQEKE EMKSRVHNYI TEVSRWESLM AAKERENQDL LDRFQMLHDR ENSTTRP00000014045/1-1102 ELEAAVQEKE EMKSRVHNYI TEVSRWESLM ASKERENQDL LDRFQMLHDR 901 950 bmy_09822T0/1-850 AEDWEVKAHQ AEGESSSVRL ELLSIDTERR HLRERVELLE KEIQE----- ENSBTAP00000012468/1-1139 AEDWEVKAHQ AEGESSSVRL ELLSIDTERR HLRERVELLE KEIQEHMNAH BACU000668/1-1067 AEDWEVKAHQ AEGESSSVRL ELLSIDTERR HLRERVELLE KEIQEHINAH ENSTTRP00000014045/1-1102 AEDWEVKAHQ AEGESSSVRL ELLSIDTERR HLRERVELLE KEIQEHINAH 951 1000 bmy_09822T0/1-850 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012468/1-1139 HAYESQISSM AKAISRLEEE LRHQEDEKAA VLNDLSSLRE LCIKLDSGKD BACU000668/1-1067 HAYESQISSM AKAISRLEEE LRHQEDEKAA VLNDVSSLRE LCIKLDSGKD ENSTTRP00000014045/1-1102 HAYESQISSM AKAMSRLEEE LRHQEDEKAA VLNDVSSLRD LCIKLDSGKD 1001 1050 bmy_09822T0/1-850 ---------- -----VAVEL ENVKSESELL KKQLSSERHT IKNLESLLAT ENSBTAP00000012468/1-1139 IMTQQLNSKN LEFERVTMEL ENIKSESELL KKQLLSERHT IKNLESLLAT BACU000668/1-1067 IMTQQLNSKN LEFERVAVEL ENVKSESELL KKQLSSERHT IKNLESLLAT ENSTTRP00000014045/1-1102 IMTQQLNSKN LEFERVAVEL ENVKSESELL KKQLSSERHT IKNLESLLAT 1051 1100 bmy_09822T0/1-850 NRDKEFHSHL TSHEKDTEIQ LLKEKLTFSE SKLGGTRGSE RVDFRKIPKF ENSBTAP00000012468/1-1139 NRDKEFHSHL TSHEKDTEIQ ILKEKLTLSE SKLNSQSREN TMLRAKMAQL BACU000668/1-1067 NRDKEFHSHL TSHEKDTEIQ LLKEKLTLSE SKLNSQSREN TMLRAKMAQL ENSTTRP00000014045/1-1102 NRDKEFHSHL TSHEKDTEIQ LLKEKLTLSE SKLNSQSREN TMLRAKMAQL 1101 1150 bmy_09822T0/1-850 EE-------- ---------- ---------- ---------- ---------- ENSBTAP00000012468/1-1139 QTDLDVLKRQ ISTERYERER AIQEMRRHGL RTPPLSSTMR SPLHSPEHIN BACU000668/1-1067 QTDLDVLKRQ ISTERYERER AIQEMRRHGL RTPPLSSTLK SPLHSPEHID ENSTTRP00000014045/1-1102 QTDLDVLKRQ ISTERYE--- ---------- ---------- ----------