KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:03 2014 Check: 00 .. Name: ENSP00000367942/1-454 Len: 456 Check: 241 Weight: 1.00 Name: ENSBTAP00000012476/1-453 Len: 456 Check: 2075 Weight: 1.00 Name: ENSTTRP00000013964/1-454 Len: 456 Check: 639 Weight: 1.00 Name: bmy_17663T0/1-452 Len: 456 Check: 385 Weight: 1.00 Name: BACU013072/1-452 Len: 456 Check: 1675 Weight: 1.00 // 1 50 ENSP00000367942/1-454 MARPNKFLLW FCCFAWLCFP ISLGSQASGG EAQIAASAEL ESGAMPWSLL ENSBTAP00000012476/1-453 MALPNKFFLW FCCFAWLCFP ISLDSQPSRG EAQIVARTAL ESEAETWSLL ENSTTRP00000013964/1-454 MALPSKFFLC FCCFAWLCFP ISLGSQASRG EAQIAASAPL ETEAEPQSSL bmy_17663T0/1-452 MALPSKFFLC FCCFAWLCFP ISLGSQASRG EAQIAASAPL ESEAEPRSFL BACU013072/1-452 MALPSKFFLC FCCFAWLCFS ISLGSQASRG EAQIAASAPL ESEAEPRSFL 51 100 ENSP00000367942/1-454 QHIDERDRAG LLPALFKVLS VGRGGSPRLQ PDSRALHYMK KLYKTYATKE ENSBTAP00000012476/1-453 KHLDGRHRPG LLSPLLNVLY DGHREPPRLQ PDDRALSYMK RLYKAYATKE ENSTTRP00000013964/1-454 QPLDGRHRPG LLSPLFKVLY NGQMEAPRLQ PDDRALHYMK RLYKACATKE bmy_17663T0/1-452 QPLDGRHRPG LLSPLFKVLY DGQTEAPRLQ PDDRALHYMK RLYKACATKE BACU013072/1-452 QPLDGRHRPG LLSPLFKVLY DGQTEAPRLQ PDDRALHYMK RLYKACATKE 101 150 ENSP00000367942/1-454 GIPKSNRSHL YNTVRLFTPC TRHKQAPGDQ VTGILP-SVE LLFNLDRITT ENSBTAP00000012476/1-453 GTPKSNRSHL YNTVRLFTPC AQHKQAPGDQ AAGTLP-SVD LLFNLDRVTV ENSTTRP00000013964/1-454 GIPKSNRSHL YNTVRLFTPC AQHKQAPGDQ VTGTLPSSVD LLFNLDRVTA bmy_17663T0/1-452 GIPKSNRSHL YNTVRLFAPC AQHKQAPGDR VTGTLPSSVD LLFNLDRVTA BACU013072/1-452 GIPKSNRSHL YNTVRLFAPC AQHKQASGDQ VTGTLPSSVD LLFNLDRVTA 151 200 ENSP00000367942/1-454 VEHLLKSVLL YNINNSVSFS SAVKCVCNLM IKEPKSSSRT LGRAPYSFTF ENSBTAP00000012476/1-453 VEHLFKSVLL YTFNNSISFP FPVKCICNLV IKEPEFSSKT LPRAPYSFTF ENSTTRP00000013964/1-454 VEHLLKSVLL YTFNNSVSFP SPVKCVCNLV IKEPEFSSKT LPRVPYSFTF bmy_17663T0/1-452 VEHLLKSVLL YTFNNSVSFP SPVKCVCNLV IKEPEFSSKT LPRVPCSFTF BACU013072/1-452 VEHLLKSVLL YTFNNSVSFP SPVKCLCNLV IKEPEFSSKT LPRVPYSFTF 201 250 ENSP00000367942/1-454 NSQFEFGKKH KWIQIDVTSL LQPLVASNKR SIHMSINFTC MKDQLEHPSA ENSBTAP00000012476/1-453 NSQFEFRKKY KWIEIDVTAP LEPLVASHKR NIHMSVNFTC VKDQLQHPSA ENSTTRP00000013964/1-454 HSQFELRKKY RWIEIDVTAL LQPLVASNKR SIHMSVNVTC VKDQLQHPSA bmy_17663T0/1-452 HSQFELRKKY RWIEIDVTAL LQPLVASNKR SIHMSVSVTC VKDQLQHPSA BACU013072/1-452 HSQFELRKKY RWIEIDVTAL LQPLVASNKR SIHMSVSVTC VKDQLRHPSV 251 300 ENSP00000367942/1-454 QNGLFNMT-L VSPSLILYLN DTSAQAYHSW YSLHYKRRPS QGPDQERSLS ENSBTAP00000012476/1-453 RDSLFNMTLL LAPSLLLYLN DTSAQAFHRW HSLHPKRKPS QDPDQKRGLS ENSTTRP00000013964/1-454 QDCPLNMTLL VAPSLLLYLN DTSAQAYHRW YSLHYKKRPS QGPDQKRELS bmy_17663T0/1-452 QDSPLNMTLL AAPSLLLYLN DTSAQAYHRW YSLHYKTRPS QGPDQKRELS BACU013072/1-452 QDSPLNVTLL AAPSLLLYLN DTSAQAYHRW YSLRYKTRPS QAPDQKRELS 301 350 ENSP00000367942/1-454 AYPVGEEAAE DGRSSHHRHR RGQETVSSEL KKPLGPASFN LSEYFRQFLL ENSBTAP00000012476/1-453 ACPMGEEAAE GVRLS--RHR RDQESVSSEL KKPLVPASFN LSEYFKQFLF ENSTTRP00000013964/1-454 AYPMGEEPAE GVRSS--RHR RDQETVSSEL KKPLVPASFN LSEYFKQFLF bmy_17663T0/1-452 AYPMGEEAAE GV--S--RHR RDQETVGSEL KKPLVPASFN LSEYFKQFLF BACU013072/1-452 AYPMGEEAAE GV--S--RHR RDQETVGSEL KKPLVPASFN LSEYFKQFLF 351 400 ENSP00000367942/1-454 PQNECELHDF RLSFSQLKWD NWIVAPHRYN PRYCKGDCPR AVGHRYGSPV ENSBTAP00000012476/1-453 PQNECELHDF RLSFSQLKWD NWIVAPHKYN PRYCKGDCPR AVGHRYGSPV ENSTTRP00000013964/1-454 PQNECELHDF KLSFSQLKWD NWIVAPHKYN PRYCKGDCPR AVGHRYGSPV bmy_17663T0/1-452 PQNECELHDF RLSFSQLKWD NWIVAPHKYN PRYCKGDCPR AVGHRYGSPV BACU013072/1-452 PQNECELHDF RLSFSQLKWD NWIVAPRTYN PRYCKGDCPR ALGHRYGSPV 401 450 ENSP00000367942/1-454 HTMVQNIIYE KLDSSVPRPS CVPAKYSPLS VLTIEPDGSI AYKEYEDMIA ENSBTAP00000012476/1-453 HTMVMNIIHE KLDSSVPRPS CVPAKYSPLS VLAIEPDGSI AYKEYEDMIA ENSTTRP00000013964/1-454 HTMVQNIIHE KLDSSVPRPS CVPAKYSPLS VLAIEPDGSI AYKEYEDMIA bmy_17663T0/1-452 HTMVQNIIHE KLDSSVPRPS CVPAKYSPLS VLXIEPDGSI AYKEYEDMIA BACU013072/1-452 HTMVQNIIHE KLDSSVPRPS CVPAKYSPLS VLAIEPDGSI AYKEYEDMIA 451 500 ENSP00000367942/1-454 TKCTCR ENSBTAP00000012476/1-453 TKCTCR ENSTTRP00000013964/1-454 TKCTCR bmy_17663T0/1-452 TKCTCR BACU013072/1-452 TKCTCR