KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:11 2014 Check: 00 .. Name: ENSP00000303482/1-257 Len: 322 Check: 2265 Weight: 1.00 Name: bmy_00953T0/1-288 Len: 322 Check: 8466 Weight: 1.00 Name: ENSBTAP00000012505/1-257 Len: 322 Check: 6622 Weight: 1.00 Name: BACU001991/1-257 Len: 322 Check: 6935 Weight: 1.00 Name: ENSTTRP00000011432/1-257 Len: 322 Check: 7783 Weight: 1.00 // 1 50 ENSP00000303482/1-257 -------MVS WMICR----- ---------- ---------- ---------- bmy_00953T0/1-288 MGHSCRPGQA WDVCKQQGGE VASRALSQVQ VVQAKREEQG RHCHLEHGVG ENSBTAP00000012505/1-257 -------MVS WMICR----- ---------- ---------- ---------- BACU001991/1-257 -------MVS WMICR----- ---------- ---------- ---------- ENSTTRP00000011432/1-257 -------MVS WMICR----- ---------- ---------- ---------- 51 100 ENSP00000303482/1-257 ---------- ---------- ---LVVLVFG MLCPAYASYK AVKTKNIREY bmy_00953T0/1-288 GRPPPGRDMG RGAPHTLPLL WGLLFRLVFG MLYPTYASYK AVKTKNIREY ENSBTAP00000012505/1-257 ---------- ---------- ---LVVLVFG MLYPAYASYK AVKTKNIREY BACU001991/1-257 ---------- ---------- ---LVVLVFG MLYPTYASYK AVKTKNIREY ENSTTRP00000011432/1-257 ---------- ---------- ---LVVLVFG MLYPTYASYK AVKTKNIREY 101 150 ENSP00000303482/1-257 VRWMMYWIVF ALFMAAEIVT DIFISWFPFY YEIKMAFVLW LLSPYTKGAS bmy_00953T0/1-288 VRWMMYWIVF ALFMAVETFT DIFISWSGHW ---------- ---------- ENSBTAP00000012505/1-257 VRWMMYWIVF ALFMAVETFT DIFISWFPFY YEIKMAFVLW LLSPYTRGAS BACU001991/1-257 VRWMMYWIVF ALFMAVETFT DIFISWFPFY YEIKMAFVLW LLSPYTKGAS ENSTTRP00000011432/1-257 VRWMMYWIVF ALFMAVETFT DVFISWFPFY YEIKMAFVLW LLSPYTKGAS 151 200 ENSP00000303482/1-257 LLYRKFVHPS LSRHEKEIDA YIVQAKERSY ETVLSFGKRG LNIAASAAVQ bmy_00953T0/1-288 ---------- ----GSEIDT YIVQAKERSY ETVLSFGKRG LNIAASAAVQ ENSBTAP00000012505/1-257 MLYRKFVHPS LSRHEKEIDT YIVQAKERSY ETVLSFGKRG LNIAASAAVQ BACU001991/1-257 LLYRKFVHPS LSRHEKEIDT YIVQAKERSY ETVLSFGKRG LNIAASAAVQ ENSTTRP00000011432/1-257 LLYRKFVHPS LSRHEKEIDT YIVQAKERSY ETVLSFGKRG LNIAASAAVQ 201 250 ENSP00000303482/1-257 AATKSQGALA GRLRSFSMQD LRSISDAPAP AYHDPLYLED QVSHRRPPIG bmy_00953T0/1-288 AATKSQGALA GRLRSFSMQD LRTISDAPAP TYQDPLYLED QVPHCRPPIG ENSBTAP00000012505/1-257 AATKSQGALA GKLRSFSMQD LRTIPDGPAP TYQDPLYLED QVPHRRPPIG BACU001991/1-257 AAAKSQGALA GRLRSFSMQD LRTISDAPAP TYQDPLYLED QVPHRRPPIG ENSTTRP00000011432/1-257 AATKSQGALA GRLRSFSMQD LRTISDAPAP TYQDPLYLED QVPHRRPPIG 251 300 ENSP00000303482/1-257 YRAGGLQDSD TEDECWSDTE AVPRAPARPR EKPLIRSQSL RVVKRKPPVR bmy_00953T0/1-288 YRAGGLQDSD TEDECWSDTE VVAQPSARPR EKPLGRTQSL RVVKRKPLVR ENSBTAP00000012505/1-257 YRAGGLRDSD TDNECWSDTE VVPQPPARPR EKPLGRSQSL RVIKRKPLAR BACU001991/1-257 YRAGGLQDSD TEDECWSDTE VVPQPSARPR EKPLGRTQSL RVVKRKPLVR ENSTTRP00000011432/1-257 YRSGGLQDSD TEDECWSDTE VVPQPSARPR EKPLGRTQSL RVVKRKPPVR 301 350 ENSP00000303482/1-257 EGTSRSLKVR TRKKTVPSDV DS bmy_00953T0/1-288 EGTSRSLKVR TRKKTTPSDM DS ENSBTAP00000012505/1-257 EGTSRSLKVR TRKKTAPSDM DS BACU001991/1-257 EGTSRSLKVR TRKKTTPSDM DS ENSTTRP00000011432/1-257 EGTTRSLKVR TRKKTTPSDM DS